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The map label for this gene is 229916805

Identifier: 229916805

GI number: 229916805

Start: 1040660

End: 1041103

Strand: Direct

Name: 229916805

Synonym: EAT1b_1078

Alternate gene names: NA

Gene position: 1040660-1041103 (Clockwise)

Preceding gene: 229916803

Following gene: 229916806

Centisome position: 34.69

GC content: 54.95

Gene sequence:

>444_bases
ATGCCAGACGCAAACGAACAAATCAAAGAGTGGGAACCGATGATCTATTACGTCATCCGCCAACTCCATCTTCATCCGAA
CGAAGTCGACGATGCTGCCCAGACGGCACGAATCGCCCTATGGCGAGCCATCCAAGACGGCAAGACGCTAGGAAAGACAT
ACTGTTTCATCCGCATCCGTGGAGCGATCTTAAACGAGCGTGCCAAACAGGCGAAGACGCTCCAGCACGAGGTGACGAGT
GAGCGCCTCCCCGAACAAATCGACAAGAGTGAGATGCCGCTGTCCCTCTGGCTAGACGACAAGCGTTCCACTTTACCAAA
TCGTCATTTCACCTTACTCTGCCATATGCTTCACGGAACTGAAGCATCGCTCGGGTACTCCCCGAGTCGCCTCCGCGCCT
ACAAGGCCGAACTCCAGCGGATGCTCCGTGAGGACAACGAGTAA

Upstream 100 bases:

>100_bases
TGCGCCAAGCCTTATGGATCAAAAGCAGGGTTTCTCTATAACAACCATTATGCTGTATCCACCTAGGAAACTTGAGACGC
GCGCGGGAAAGCAGCCCATC

Downstream 100 bases:

>100_bases
GAGGAGAATGAAGATGACTTTACACATGAAGGACGCTGTCGACCAGCACGTTCACTACTTACGCATGACCGGAAAATCGG
ACAACACGGTCAGTCAGGCG

Product: sigma-70 region 2 domain protein

Products: NA

Alternate protein names: FliA/WhiG Family RNA Polymerase Sigma Factor

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MPDANEQIKEWEPMIYYVIRQLHLHPNEVDDAAQTARIALWRAIQDGKTLGKTYCFIRIRGAILNERAKQAKTLQHEVTS
ERLPEQIDKSEMPLSLWLDDKRSTLPNRHFTLLCHMLHGTEASLGYSPSRLRAYKAELQRMLREDNE

Sequences:

>Translated_147_residues
MPDANEQIKEWEPMIYYVIRQLHLHPNEVDDAAQTARIALWRAIQDGKTLGKTYCFIRIRGAILNERAKQAKTLQHEVTS
ERLPEQIDKSEMPLSLWLDDKRSTLPNRHFTLLCHMLHGTEASLGYSPSRLRAYKAELQRMLREDNE
>Mature_146_residues
PDANEQIKEWEPMIYYVIRQLHLHPNEVDDAAQTARIALWRAIQDGKTLGKTYCFIRIRGAILNERAKQAKTLQHEVTSE
RLPEQIDKSEMPLSLWLDDKRSTLPNRHFTLLCHMLHGTEASLGYSPSRLRAYKAELQRMLREDNE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17212; Mature: 17081

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDANEQIKEWEPMIYYVIRQLHLHPNEVDDAAQTARIALWRAIQDGKTLGKTYCFIRIR
CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHEEEEEEH
GAILNERAKQAKTLQHEVTSERLPEQIDKSEMPLSLWLDDKRSTLPNRHFTLLCHMLHGT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHCCCCHHHHHHHHHHHCC
EASLGYSPSRLRAYKAELQRMLREDNE
CCCCCCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PDANEQIKEWEPMIYYVIRQLHLHPNEVDDAAQTARIALWRAIQDGKTLGKTYCFIRIR
CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHEEEEEEH
GAILNERAKQAKTLQHEVTSERLPEQIDKSEMPLSLWLDDKRSTLPNRHFTLLCHMLHGT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHCCCCHHHHHHHHHHHCC
EASLGYSPSRLRAYKAELQRMLREDNE
CCCCCCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA