| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
Click here to switch to the map view.
The map label for this gene is 229916802
Identifier: 229916802
GI number: 229916802
Start: 1035066
End: 1035521
Strand: Direct
Name: 229916802
Synonym: EAT1b_1075
Alternate gene names: NA
Gene position: 1035066-1035521 (Clockwise)
Preceding gene: 229916801
Following gene: 229916803
Centisome position: 34.5
GC content: 49.34
Gene sequence:
>456_bases GTGCTGACCTATCGTCCGAGCGCTGGCCCGTGTCTCGAACCACAGCCTCTTCTGAACGCCACGCTGAAGTTGATTCCACG AGATGGATATGTGACAGAAATGACGATCCGATTCTTCGAGGACGGAACCGTCTCTCGCACGACAGCATTTAGACATGCCG AATCACGAGACCCCTGGACACTTCCGAAGACGAAACATGAACGATTCGATTCAGAAGAAGGCATGATCCTGTATCAACGT TTATTGTCGCTGAACACCCCTACGTGGAAAAAATACTACAGACATTACGATCAAATCATGGATGGAACGGAGTGGAACCT GACCATCGAAAATCAACAAGGGGGCCGCTGCGAATATGGAGGAGACATGATCTTCCCACCGGAGTGGAACGAGACTCGTA CGCTTTTCGGACTGGAACCTTTACCCTCGAACTATGAATATATCTTGTCTGATTGA
Upstream 100 bases:
>100_bases TGTTCAACACAAATGGAAGCTCTTTCTGTACGTACTAAGAGAGAAGGTGTTTTCTCGCCCGAGGAACCGGTCGCCTTTCT CCAGAGTCATCGGAAGAAAA
Downstream 100 bases:
>100_bases GAAAAATTCCGTTTTCATGTGTTTGTCTCTTGGGAGTCTCATATGGGTTCGGTTGTGCGACTTGCCTACACTTGCATCCT TCTTTACAACCATTAACATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MLTYRPSAGPCLEPQPLLNATLKLIPRDGYVTEMTIRFFEDGTVSRTTAFRHAESRDPWTLPKTKHERFDSEEGMILYQR LLSLNTPTWKKYYRHYDQIMDGTEWNLTIENQQGGRCEYGGDMIFPPEWNETRTLFGLEPLPSNYEYILSD
Sequences:
>Translated_151_residues MLTYRPSAGPCLEPQPLLNATLKLIPRDGYVTEMTIRFFEDGTVSRTTAFRHAESRDPWTLPKTKHERFDSEEGMILYQR LLSLNTPTWKKYYRHYDQIMDGTEWNLTIENQQGGRCEYGGDMIFPPEWNETRTLFGLEPLPSNYEYILSD >Mature_151_residues MLTYRPSAGPCLEPQPLLNATLKLIPRDGYVTEMTIRFFEDGTVSRTTAFRHAESRDPWTLPKTKHERFDSEEGMILYQR LLSLNTPTWKKYYRHYDQIMDGTEWNLTIENQQGGRCEYGGDMIFPPEWNETRTLFGLEPLPSNYEYILSD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17748; Mature: 17748
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTYRPSAGPCLEPQPLLNATLKLIPRDGYVTEMTIRFFEDGTVSRTTAFRHAESRDPWT CCEECCCCCCCCCCCHHHHHEEEEECCCCCEEEEEEEEECCCCCCHHHHHHCCCCCCCCC LPKTKHERFDSEEGMILYQRLLSLNTPTWKKYYRHYDQIMDGTEWNLTIENQQGGRCEYG CCCCHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCEEECC GDMIFPPEWNETRTLFGLEPLPSNYEYILSD CCEEECCCCCCCEEEEECCCCCCCCEEEECC >Mature Secondary Structure MLTYRPSAGPCLEPQPLLNATLKLIPRDGYVTEMTIRFFEDGTVSRTTAFRHAESRDPWT CCEECCCCCCCCCCCHHHHHEEEEECCCCCEEEEEEEEECCCCCCHHHHHHCCCCCCCCC LPKTKHERFDSEEGMILYQRLLSLNTPTWKKYYRHYDQIMDGTEWNLTIENQQGGRCEYG CCCCHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCEEECC GDMIFPPEWNETRTLFGLEPLPSNYEYILSD CCEEECCCCCCCEEEEECCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA