| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229916801
Identifier: 229916801
GI number: 229916801
Start: 1034276
End: 1034917
Strand: Direct
Name: 229916801
Synonym: EAT1b_1074
Alternate gene names: NA
Gene position: 1034276-1034917 (Clockwise)
Preceding gene: 229916797
Following gene: 229916802
Centisome position: 34.48
GC content: 43.77
Gene sequence:
>642_bases ATGATGAAGCATGTACATACTTTTTTCGAGCGATTCCGCGAGAAGAACCAGTTTATGTTAGACAACCGATTACCTGAATT TGACTACACCCCTTTACCCACAATCTATTCCCATGATGACTTGGTTTGGCATAAACTTGATGCCCGTAAACGCTATAAGT TCACTGAGATGTTCGGTTATGATGGGAAGTTCATGGTTCCATACAAACTCAACGAACTGACATATCGCATATCGTTCCCA ATCGATGCGTTGATTGAGCCGGATGCTTTCCTCTTTAAAGCCACTCTCTACGAAAACACCTACATCGGCCAATCCTATGC GGACATTCTCGAAACGATATCAACTCTGACCTTTTTTGAAAGAGGATTGGTCAAACACACGTACGAAAAGCGGGGAGATT CTGAGTTGCTTCGCCAGAGAGGCGGATGGTACGACCGGGCCACTTCCGAAACAATCTATGAACAGTTTCTCAACATCGGA TTTCAAGATTGGAAAACAGACTATGCAACCGGTAAACCCTTTGTGGATGGGGGACACTGGGCGTTGACTATTGTTTTTCC GAACGGAGAAACACTCAAATATACTGGTGCTTGTGAGTATCCTCATAACTGGAGAGAGGTCCAATCTCTATTTCATATAT AG
Upstream 100 bases:
>100_bases ATCTTACATCGTTCACTTACAAAGATGACCTATAATGAAATCGTATTTTCAGCACGCCACTCTTAGATTCATTCAAATCA TCGTTTAGGAGAACAACATC
Downstream 100 bases:
>100_bases ATGACTTTGGAAGTCATGATAGAAAGGAAGGATTCTCTTGCCCATCGATGTTCAACACAAATGGAAGCTCTTTCTGTACG TACTAAGAGAGAAGGTGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MMKHVHTFFERFREKNQFMLDNRLPEFDYTPLPTIYSHDDLVWHKLDARKRYKFTEMFGYDGKFMVPYKLNELTYRISFP IDALIEPDAFLFKATLYENTYIGQSYADILETISTLTFFERGLVKHTYEKRGDSELLRQRGGWYDRATSETIYEQFLNIG FQDWKTDYATGKPFVDGGHWALTIVFPNGETLKYTGACEYPHNWREVQSLFHI
Sequences:
>Translated_213_residues MMKHVHTFFERFREKNQFMLDNRLPEFDYTPLPTIYSHDDLVWHKLDARKRYKFTEMFGYDGKFMVPYKLNELTYRISFP IDALIEPDAFLFKATLYENTYIGQSYADILETISTLTFFERGLVKHTYEKRGDSELLRQRGGWYDRATSETIYEQFLNIG FQDWKTDYATGKPFVDGGHWALTIVFPNGETLKYTGACEYPHNWREVQSLFHI >Mature_213_residues MMKHVHTFFERFREKNQFMLDNRLPEFDYTPLPTIYSHDDLVWHKLDARKRYKFTEMFGYDGKFMVPYKLNELTYRISFP IDALIEPDAFLFKATLYENTYIGQSYADILETISTLTFFERGLVKHTYEKRGDSELLRQRGGWYDRATSETIYEQFLNIG FQDWKTDYATGKPFVDGGHWALTIVFPNGETLKYTGACEYPHNWREVQSLFHI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25461; Mature: 25461
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKHVHTFFERFREKNQFMLDNRLPEFDYTPLPTIYSHDDLVWHKLDARKRYKFTEMFGY CCHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCEECCCCEEEEECCHHHHHHHHHHHCC DGKFMVPYKLNELTYRISFPIDALIEPDAFLFKATLYENTYIGQSYADILETISTLTFFE CCCEEEEEEECCEEEEEECCHHHHCCCCHHEEEEEHHCCCCCCCHHHHHHHHHHHHHHHH RGLVKHTYEKRGDSELLRQRGGWYDRATSETIYEQFLNIGFQDWKTDYATGKPFVDGGHW HHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHCCCCCCCCCCCEECCCE ALTIVFPNGETLKYTGACEYPHNWREVQSLFHI EEEEEECCCCEEEEEECCCCCCCHHHHHHHHCC >Mature Secondary Structure MMKHVHTFFERFREKNQFMLDNRLPEFDYTPLPTIYSHDDLVWHKLDARKRYKFTEMFGY CCHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCEECCCCEEEEECCHHHHHHHHHHHCC DGKFMVPYKLNELTYRISFPIDALIEPDAFLFKATLYENTYIGQSYADILETISTLTFFE CCCEEEEEEECCEEEEEECCHHHHCCCCHHEEEEEHHCCCCCCCHHHHHHHHHHHHHHHH RGLVKHTYEKRGDSELLRQRGGWYDRATSETIYEQFLNIGFQDWKTDYATGKPFVDGGHW HHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHCCCCCCCCCCCEECCCE ALTIVFPNGETLKYTGACEYPHNWREVQSLFHI EEEEEECCCCEEEEEECCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA