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The map label for this gene is ykwD [H]

Identifier: 229916764

GI number: 229916764

Start: 984633

End: 985532

Strand: Direct

Name: ykwD [H]

Synonym: EAT1b_1037

Alternate gene names: 229916764

Gene position: 984633-985532 (Clockwise)

Preceding gene: 229916763

Following gene: 229916766

Centisome position: 32.82

GC content: 54.33

Gene sequence:

>900_bases
TTGAAGAAGCATCTCTCTCTACTACTCACCATCATTCTGACACTTGGTGTGATCGGATCACCACTCTCTATTAGCCCTGT
CCAAGCCTATTACGAGACGTCAATCAATACGACCGGTTACGTGACGAACATCAGTCAGCTCAACGTCCGGCAATCACCTT
CTTTGAGCGCGAAACGACTTGCGCTCATCCCACGAGACGGTTCGATGCGCGTCCGGACATCGTTCCAGTTGGACGGCGTG
CGTTGGTATAAGATCCAATGGGGCAGCGGTTACGCTTATCTGCCCGCCAAGTATGTCCGCTTGTCCACTGCTGAGGTGAA
GTTCACGAAACCGACGTACGTCAAGCCGTCGAGCGTTTATTTGAAATCCCGTCCGCTCACGACCTCATCAAACGTCAAGT
TCGTCCGGCAAGGCACCGAACTCGAGACCGTGTCATATCGCTATACCGGCACATCGCGATGGTATAAGGTGCGTTACGGT
TCATACACCGGGTACATCCTCGCCAACCATGTCAGCTTCACGTCGCCCGTCAACGTGTTGACCGAGACGAACAAAGAACG
AGATGCTGCCGGTCTCTCTCTTCTCGCCGCTTCGAGTGAGGCGAACCGTGTCGCCCAAGTCCGTGCCGATGAGATGGCGC
GAACGGGGCAATTCTCGCACACGCTCAAGGAGAATGGTACACCCGGCGACACGTTAGACGCTTACCGTGTCTCGTATCGT
GGCTGGGGGGAGAACATCTATAAAGGATCGAGCGACCCGGTCCGGGCGGTCGATGCGTGGATGAACAGTAGCGGTCATCG
CGCGAACATCTTGAATGCGAATTATACGCATCTCGGGATTGGTAAAGCGACCGATGCCCAAGGGTCGACCATCCATGTCC
AAATCTTTTTGACGAAATAA

Upstream 100 bases:

>100_bases
GGCTCACGAAGAGTCCATCCTTTTTGTAATGAAATGGTAAAACCAAAAATCACCCAAACAATATAGAATATAGGGAGTCC
CACAAAAGGAGTCGATTCCA

Downstream 100 bases:

>100_bases
CCGCTGAAGGGACAGTCACGTCGTGGCTGTCTTTTTGTTCGGCAAAACAAAAAAGCGGATTTGCATCCGCTCTTGAACCT
GACACTCCTATATCTCATGC

Product: SCP-like extracellular

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MKKHLSLLLTIILTLGVIGSPLSISPVQAYYETSINTTGYVTNISQLNVRQSPSLSAKRLALIPRDGSMRVRTSFQLDGV
RWYKIQWGSGYAYLPAKYVRLSTAEVKFTKPTYVKPSSVYLKSRPLTTSSNVKFVRQGTELETVSYRYTGTSRWYKVRYG
SYTGYILANHVSFTSPVNVLTETNKERDAAGLSLLAASSEANRVAQVRADEMARTGQFSHTLKENGTPGDTLDAYRVSYR
GWGENIYKGSSDPVRAVDAWMNSSGHRANILNANYTHLGIGKATDAQGSTIHVQIFLTK

Sequences:

>Translated_299_residues
MKKHLSLLLTIILTLGVIGSPLSISPVQAYYETSINTTGYVTNISQLNVRQSPSLSAKRLALIPRDGSMRVRTSFQLDGV
RWYKIQWGSGYAYLPAKYVRLSTAEVKFTKPTYVKPSSVYLKSRPLTTSSNVKFVRQGTELETVSYRYTGTSRWYKVRYG
SYTGYILANHVSFTSPVNVLTETNKERDAAGLSLLAASSEANRVAQVRADEMARTGQFSHTLKENGTPGDTLDAYRVSYR
GWGENIYKGSSDPVRAVDAWMNSSGHRANILNANYTHLGIGKATDAQGSTIHVQIFLTK
>Mature_299_residues
MKKHLSLLLTIILTLGVIGSPLSISPVQAYYETSINTTGYVTNISQLNVRQSPSLSAKRLALIPRDGSMRVRTSFQLDGV
RWYKIQWGSGYAYLPAKYVRLSTAEVKFTKPTYVKPSSVYLKSRPLTTSSNVKFVRQGTELETVSYRYTGTSRWYKVRYG
SYTGYILANHVSFTSPVNVLTETNKERDAAGLSLLAASSEANRVAQVRADEMARTGQFSHTLKENGTPGDTLDAYRVSYR
GWGENIYKGSSDPVRAVDAWMNSSGHRANILNANYTHLGIGKATDAQGSTIHVQIFLTK

Specific function: Unknown

COG id: COG2340

COG function: function code S; Uncharacterized protein with SCP/PR1 domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SCP domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014044
- InterPro:   IPR014258 [H]

Pfam domain/function: PF00188 SCP [H]

EC number: NA

Molecular weight: Translated: 33172; Mature: 33172

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKHLSLLLTIILTLGVIGSPLSISPVQAYYETSINTTGYVTNISQLNVRQSPSLSAKRL
CCHHHHHHHHHHHHHHHCCCCCCCCHHHEEEECCCCCCEEEEEHEEECCCCCCCCCCEEE
ALIPRDGSMRVRTSFQLDGVRWYKIQWGSGYAYLPAKYVRLSTAEVKFTKPTYVKPSSVY
EEEECCCCEEEEEEEEECCEEEEEEEECCCEEECCEEEEEEEEEEEEECCCCEECCCCEE
LKSRPLTTSSNVKFVRQGTELETVSYRYTGTSRWYKVRYGSYTGYILANHVSFTSPVNVL
EECCCCCCCCCCEEEECCCCEEEEEEEECCCCEEEEEEECCEEEEEEEECCCCCCCCHHE
TETNKERDAAGLSLLAASSEANRVAQVRADEMARTGQFSHTLKENGTPGDTLDAYRVSYR
ECCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCEEEEEEE
GWGENIYKGSSDPVRAVDAWMNSSGHRANILNANYTHLGIGKATDAQGSTIHVQIFLTK
CCCCHHCCCCCCCHHHHHHHHCCCCCEEEEECCCCEEEECCCCCCCCCCEEEEEEEEEC
>Mature Secondary Structure
MKKHLSLLLTIILTLGVIGSPLSISPVQAYYETSINTTGYVTNISQLNVRQSPSLSAKRL
CCHHHHHHHHHHHHHHHCCCCCCCCHHHEEEECCCCCCEEEEEHEEECCCCCCCCCCEEE
ALIPRDGSMRVRTSFQLDGVRWYKIQWGSGYAYLPAKYVRLSTAEVKFTKPTYVKPSSVY
EEEECCCCEEEEEEEEECCEEEEEEEECCCEEECCEEEEEEEEEEEEECCCCEECCCCEE
LKSRPLTTSSNVKFVRQGTELETVSYRYTGTSRWYKVRYGSYTGYILANHVSFTSPVNVL
EECCCCCCCCCCEEEECCCCEEEEEEEECCCCEEEEEEECCEEEEEEEECCCCCCCCHHE
TETNKERDAAGLSLLAASSEANRVAQVRADEMARTGQFSHTLKENGTPGDTLDAYRVSYR
ECCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCEEEEEEE
GWGENIYKGSSDPVRAVDAWMNSSGHRANILNANYTHLGIGKATDAQGSTIHVQIFLTK
CCCCHHCCCCCCCHHHHHHHHCCCCCEEEEECCCCEEEECCCCCCCCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]