Click here to switch to the map view.

The map label for this gene is ybbC [H]

Identifier: 229916763

GI number: 229916763

Start: 983287

End: 984522

Strand: Direct

Name: ybbC [H]

Synonym: EAT1b_1036

Alternate gene names: 229916763

Gene position: 983287-984522 (Clockwise)

Preceding gene: 229916762

Following gene: 229916764

Centisome position: 32.78

GC content: 53.48

Gene sequence:

>1236_bases
ATGAAAAAATGGATAGGTGGTATGACCGCGTTGACGATCCTCACGACTTCCATCGTCTGGTTGGATGCCGATGCAAAGTC
TGAACCGAAAAAGCCAAAGGTCGAACTCGGGGTCGACCGGTTGATGGAAAATCCGGAGATCTTGAAAGGGAAACGGGTCG
GACTGATCACGAATCCGACCGGGATCAACGCAAAACGTACGAGCATCGTCGACCTGTTCGACCAGTCCGATGACTTCGAA
TTGACGGCATTGTACGGACCGGAACACGGCGTTCGAGGAGATGCCCAAGCCGGGTCGACCGTCAGTTCCTACATCGATGA
CGTGACGGGATTGCCCGTATACAGTCTATATGGTGCCACGAAGAAACCGACGGCTGAGATGCTACAAGATGTCGACGTGC
TCGTCTTTGACATCCAGGATGTCGGGACACGCTACTATACGTATATCTATACGATGGCGTATGCGATGGAAGCCGCAGCC
GAGAACGATATTCCGTTCGTCGTCCTCGACCGTCCGAACCCACAAGGTGGGCTTCGCGTCGACGGTCCGGTGCTCGACCC
GGACTACTCTAGCTTCATCGGTCTCTATCCGATTCCATTAAAGCATGGGATGACCGTCGGAGAACTCGCACAACTGTTCA
ACACTGAGTATCAGATTCAAGCCGACCTCGAAGTCGTCAAAATGAAAGGATGGAAACGTTCGATGATGTATGAGGACACG
GGCCTCCCGTTCGTCATGCCGTCCCCGAACATGCCGACGACCGACACGGTCAACGTCTACCCTGCGACCGGATTGTTTGA
AGGGACGAACCTATCCGAGGGACGCGGGACGACGAAACCGTTTCAGCTGATCGGTGCGCCGTATATACAAGCGCATGAAT
ATGCGAATGAGCTGAATGGGCTCGACTTGCCGGGTGTCGCCTTCCGGGCTGCCTCGTTCACTCCGACGTTCTCCAAGCAT
GCGGGCAAACTGACGCACGGGGTTGAGGTCTATGTCACCGACCCGGTTCGATTCGAATCGACGCGAACCGGGATTGCGAT
GATTCAAACGGCTCATGACATGTATCCGGACGACTTCGAATTTTTAGCGAACGATTTCATCACGAAACTGACAGGAAACG
CCTACGTGAAAGATATGATTCTCGAAGGAGCTCCGCTTGAAGACATTCTGACGAAAATCGAGGACGAGCGGGACGCCTTC
CTCCCGATTCGAAAAGAGTATTTGCTGTATAAATGA

Upstream 100 bases:

>100_bases
AATTCCTATTTTTATGATTAAATATTGAAATTGAATTTCTGAATGGTACACTCCTGTTAAGAAATCGAAGCGCTTACATG
AATCAAAGGAGGAACTTCTG

Downstream 100 bases:

>100_bases
CGCGAGGATGGGCTCACGAAGAGTCCATCCTTTTTGTAATGAAATGGTAAAACCAAAAATCACCCAAACAATATAGAATA
TAGGGAGTCCCACAAAAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 411; Mature: 411

Protein sequence:

>411_residues
MKKWIGGMTALTILTTSIVWLDADAKSEPKKPKVELGVDRLMENPEILKGKRVGLITNPTGINAKRTSIVDLFDQSDDFE
LTALYGPEHGVRGDAQAGSTVSSYIDDVTGLPVYSLYGATKKPTAEMLQDVDVLVFDIQDVGTRYYTYIYTMAYAMEAAA
ENDIPFVVLDRPNPQGGLRVDGPVLDPDYSSFIGLYPIPLKHGMTVGELAQLFNTEYQIQADLEVVKMKGWKRSMMYEDT
GLPFVMPSPNMPTTDTVNVYPATGLFEGTNLSEGRGTTKPFQLIGAPYIQAHEYANELNGLDLPGVAFRAASFTPTFSKH
AGKLTHGVEVYVTDPVRFESTRTGIAMIQTAHDMYPDDFEFLANDFITKLTGNAYVKDMILEGAPLEDILTKIEDERDAF
LPIRKEYLLYK

Sequences:

>Translated_411_residues
MKKWIGGMTALTILTTSIVWLDADAKSEPKKPKVELGVDRLMENPEILKGKRVGLITNPTGINAKRTSIVDLFDQSDDFE
LTALYGPEHGVRGDAQAGSTVSSYIDDVTGLPVYSLYGATKKPTAEMLQDVDVLVFDIQDVGTRYYTYIYTMAYAMEAAA
ENDIPFVVLDRPNPQGGLRVDGPVLDPDYSSFIGLYPIPLKHGMTVGELAQLFNTEYQIQADLEVVKMKGWKRSMMYEDT
GLPFVMPSPNMPTTDTVNVYPATGLFEGTNLSEGRGTTKPFQLIGAPYIQAHEYANELNGLDLPGVAFRAASFTPTFSKH
AGKLTHGVEVYVTDPVRFESTRTGIAMIQTAHDMYPDDFEFLANDFITKLTGNAYVKDMILEGAPLEDILTKIEDERDAF
LPIRKEYLLYK
>Mature_411_residues
MKKWIGGMTALTILTTSIVWLDADAKSEPKKPKVELGVDRLMENPEILKGKRVGLITNPTGINAKRTSIVDLFDQSDDFE
LTALYGPEHGVRGDAQAGSTVSSYIDDVTGLPVYSLYGATKKPTAEMLQDVDVLVFDIQDVGTRYYTYIYTMAYAMEAAA
ENDIPFVVLDRPNPQGGLRVDGPVLDPDYSSFIGLYPIPLKHGMTVGELAQLFNTEYQIQADLEVVKMKGWKRSMMYEDT
GLPFVMPSPNMPTTDTVNVYPATGLFEGTNLSEGRGTTKPFQLIGAPYIQAHEYANELNGLDLPGVAFRAASFTPTFSKH
AGKLTHGVEVYVTDPVRFESTRTGIAMIQTAHDMYPDDFEFLANDFITKLTGNAYVKDMILEGAPLEDILTKIEDERDAF
LPIRKEYLLYK

Specific function: Unknown

COG id: COG3876

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008302 [H]

Pfam domain/function: PF07075 DUF1343 [H]

EC number: NA

Molecular weight: Translated: 45581; Mature: 45581

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKWIGGMTALTILTTSIVWLDADAKSEPKKPKVELGVDRLMENPEILKGKRVGLITNPT
CCCHHHHHHHHHHHHHEEEEEECCCCCCCCCCCHHHCHHHHHCCCCHHCCCEEEEEECCC
GINAKRTSIVDLFDQSDDFELTALYGPEHGVRGDAQAGSTVSSYIDDVTGLPVYSLYGAT
CCCCCHHHHEEECCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCC
KKPTAEMLQDVDVLVFDIQDVGTRYYTYIYTMAYAMEAAAENDIPFVVLDRPNPQGGLRV
CCCHHHHHCCCCEEEEEHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEE
DGPVLDPDYSSFIGLYPIPLKHGMTVGELAQLFNTEYQIQADLEVVKMKGWKRSMMYEDT
CCCCCCCCHHHCCEEECCCHHCCCCHHHHHHHHCCCEEEEECEEEEEECCCHHHHEEECC
GLPFVMPSPNMPTTDTVNVYPATGLFEGTNLSEGRGTTKPFQLIGAPYIQAHEYANELNG
CCEEEECCCCCCCCCEEEEEECCCEECCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHCCC
LDLPGVAFRAASFTPTFSKHAGKLTHGVEVYVTDPVRFESTRTGIAMIQTAHDMYPDDFE
CCCCCHHEEECCCCCCHHHHCCCCCCCEEEEEECCEEECCCCCCEEEEEEHHHCCCCHHH
FLANDFITKLTGNAYVKDMILEGAPLEDILTKIEDERDAFLPIRKEYLLYK
HHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHEECC
>Mature Secondary Structure
MKKWIGGMTALTILTTSIVWLDADAKSEPKKPKVELGVDRLMENPEILKGKRVGLITNPT
CCCHHHHHHHHHHHHHEEEEEECCCCCCCCCCCHHHCHHHHHCCCCHHCCCEEEEEECCC
GINAKRTSIVDLFDQSDDFELTALYGPEHGVRGDAQAGSTVSSYIDDVTGLPVYSLYGAT
CCCCCHHHHEEECCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCC
KKPTAEMLQDVDVLVFDIQDVGTRYYTYIYTMAYAMEAAAENDIPFVVLDRPNPQGGLRV
CCCHHHHHCCCCEEEEEHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEE
DGPVLDPDYSSFIGLYPIPLKHGMTVGELAQLFNTEYQIQADLEVVKMKGWKRSMMYEDT
CCCCCCCCHHHCCEEECCCHHCCCCHHHHHHHHCCCEEEEECEEEEEECCCHHHHEEECC
GLPFVMPSPNMPTTDTVNVYPATGLFEGTNLSEGRGTTKPFQLIGAPYIQAHEYANELNG
CCEEEECCCCCCCCCEEEEEECCCEECCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHCCC
LDLPGVAFRAASFTPTFSKHAGKLTHGVEVYVTDPVRFESTRTGIAMIQTAHDMYPDDFE
CCCCCHHEEECCCCCCHHHHCCCCCCCEEEEEECCEEECCCCCCEEEEEEHHHCCCCHHH
FLANDFITKLTGNAYVKDMILEGAPLEDILTKIEDERDAFLPIRKEYLLYK
HHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8011666; 9274029; 9384377 [H]