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The map label for this gene is ygaF [H]

Identifier: 229916724

GI number: 229916724

Start: 940969

End: 941406

Strand: Reverse

Name: ygaF [H]

Synonym: EAT1b_0997

Alternate gene names: 229916724

Gene position: 941406-940969 (Counterclockwise)

Preceding gene: 229916725

Following gene: 229916723

Centisome position: 31.38

GC content: 48.4

Gene sequence:

>438_bases
ATGCTCGCACCAACATTTTCATTACCGAACCAAAATGGAGAAATGGTTTCATTAAAGGACTATCTCGGCAAGAAAGTCGT
CTTATACTTCTATCCTCGAGATTCGACACCTGGTTGTACGACGGAGGCATGCGATTTCCGCGATGCGTTGCCGAAGATGG
AAGGCGCGGTCGTCCTTGGGGTATCGGCCGACAGTCAAAAGAAACATCAAAACTTTATCGCCAAGAATGACCTCCCATTT
GATTTGCTCGTCGACGAGGATCATGAAGTGTCCGAGCTTTACGGCGTCTGGCAGTTGAAGAAAAATTACGGGAAAGAATA
TTACGGCATCGTCCGTTCGACTTTCTTGATCAACGAGGACGGCTATATCGAAGAGGAGTGGCGCAACGTCAAAGTGAAGG
GGCACGTCGAAGAAGTCGTGGCTGCCATTCGTTCGTAA

Upstream 100 bases:

>100_bases
ATCGAAGTGCTTGACCCGTTAAAGACAAAACTAGAAGAAGCAATCGATGGCTTTGACGAACAACTCGTCGACCCGTCGTT
TGGCTAAGGAGGAACAGCAG

Downstream 100 bases:

>100_bases
AACGAGAAACTGAAGGCAAGGTCATGAGCGGTTTCAGACTGTAGACAATATAGGTCTACAGTCTTTTTTGTACCCAAGCT
AGGCACGGCTCGCTTTCCTA

Product: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen

Products: NA

Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MLAPTFSLPNQNGEMVSLKDYLGKKVVLYFYPRDSTPGCTTEACDFRDALPKMEGAVVLGVSADSQKKHQNFIAKNDLPF
DLLVDEDHEVSELYGVWQLKKNYGKEYYGIVRSTFLINEDGYIEEEWRNVKVKGHVEEVVAAIRS

Sequences:

>Translated_145_residues
MLAPTFSLPNQNGEMVSLKDYLGKKVVLYFYPRDSTPGCTTEACDFRDALPKMEGAVVLGVSADSQKKHQNFIAKNDLPF
DLLVDEDHEVSELYGVWQLKKNYGKEYYGIVRSTFLINEDGYIEEEWRNVKVKGHVEEVVAAIRS
>Mature_145_residues
MLAPTFSLPNQNGEMVSLKDYLGKKVVLYFYPRDSTPGCTTEACDFRDALPKMEGAVVLGVSADSQKKHQNFIAKNDLPF
DLLVDEDHEVSELYGVWQLKKNYGKEYYGIVRSTFLINEDGYIEEEWRNVKVKGHVEEVVAAIRS

Specific function: Unknown

COG id: COG1225

COG function: function code O; Peroxiredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Escherichia coli, GI1788825, Length=145, Percent_Identity=45.5172413793103, Blast_Score=132, Evalue=1e-32,
Organism=Saccharomyces cerevisiae, GI6322180, Length=136, Percent_Identity=36.0294117647059, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000866
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00578 AhpC-TSA [H]

EC number: =1.11.1.15 [H]

Molecular weight: Translated: 16498; Mature: 16498

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAPTFSLPNQNGEMVSLKDYLGKKVVLYFYPRDSTPGCTTEACDFRDALPKMEGAVVLG
CCCCCCCCCCCCCCEEEHHHHCCCEEEEEEEECCCCCCCCCCCCCHHHHCCCCCCEEEEE
VSADSQKKHQNFIAKNDLPFDLLVDEDHEVSELYGVWQLKKNYGKEYYGIVRSTFLINED
ECCCCCHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCHHHHHHHHHEEEECCC
GYIEEEWRNVKVKGHVEEVVAAIRS
CCCHHHHCEEEEECCHHHHHHHHCC
>Mature Secondary Structure
MLAPTFSLPNQNGEMVSLKDYLGKKVVLYFYPRDSTPGCTTEACDFRDALPKMEGAVVLG
CCCCCCCCCCCCCCEEEHHHHCCCEEEEEEEECCCCCCCCCCCCCHHHHCCCCCCEEEEE
VSADSQKKHQNFIAKNDLPFDLLVDEDHEVSELYGVWQLKKNYGKEYYGIVRSTFLINED
ECCCCCHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCHHHHHHHHHEEEECCC
GYIEEEWRNVKVKGHVEEVVAAIRS
CCCHHHHCEEEEECCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]