Click here to switch to the map view.

The map label for this gene is gatC

Identifier: 229916721

GI number: 229916721

Start: 936870

End: 937160

Strand: Reverse

Name: gatC

Synonym: EAT1b_0994

Alternate gene names: 229916721

Gene position: 937160-936870 (Counterclockwise)

Preceding gene: 229916723

Following gene: 229916720

Centisome position: 31.24

GC content: 53.26

Gene sequence:

>291_bases
TTGGCTCGTATTACAGAAGCTGAAGTTCGGCACGTCGCCGGACTTGCCCGACTTGCGATCACGGATGAAGAAGTGACGCA
CTTCACGGAGCAATTGACAAAAATTCTCGAGTTTGCCGAGCAACTCGATGAGCTGGATACAACGGGCGTCGAACCGACGA
CCCATGCCCTAGATTTGAAAAACGTACTACGCAAAGACGAGGTCCGTCCATCGCTTCCACGTGAGGAAGTCGAACGGATG
GCACCTGACTGGGAGAACGGTCAAGTCCGTGTCCCTGCAGTCTTTGAGTAA

Upstream 100 bases:

>100_bases
AAAAGGAGACATTTTCTCACAAGATAGATTTCCTTTTTTGTCTTATGAAAAAGTGGTATGATAATGAACGATGTATTGAA
AACTGTTGGAGGTGGGAATT

Downstream 100 bases:

>100_bases
GGAGGCCTTTCATGAGTTTATTTGACCACGGTGTAGCGAAACTGCATACGTTATTAAAAGAAGGCGAAGTCACGGTCACG
GACCTCGTCAAAGAGTCGTT

Product: glutamyl-tRNA(Gln) amidotransferase, C subunit

Products: NA

Alternate protein names: Asp/Glu-ADT subunit C

Number of amino acids: Translated: 96; Mature: 95

Protein sequence:

>96_residues
MARITEAEVRHVAGLARLAITDEEVTHFTEQLTKILEFAEQLDELDTTGVEPTTHALDLKNVLRKDEVRPSLPREEVERM
APDWENGQVRVPAVFE

Sequences:

>Translated_96_residues
MARITEAEVRHVAGLARLAITDEEVTHFTEQLTKILEFAEQLDELDTTGVEPTTHALDLKNVLRKDEVRPSLPREEVERM
APDWENGQVRVPAVFE
>Mature_95_residues
ARITEAEVRHVAGLARLAITDEEVTHFTEQLTKILEFAEQLDELDTTGVEPTTHALDLKNVLRKDEVRPSLPREEVERMA
PDWENGQVRVPAVFE

Specific function: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction take

COG id: COG0721

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gatC family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GATC_EXISA (C4L691)

Other databases:

- EMBL:   CP001615
- RefSeq:   YP_002885367.1
- GeneID:   7870913
- GenomeReviews:   CP001615_GR
- KEGG:   eat:EAT1b_0994
- OMA:   KDVAYIA
- ProtClustDB:   CLSK2489876
- GO:   GO:0006412
- HAMAP:   MF_00122
- InterPro:   IPR003837
- TIGRFAMs:   TIGR00135

Pfam domain/function: PF02686 Glu-tRNAGln

EC number: 6.3.5.-

Molecular weight: Translated: 10949; Mature: 10818

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARITEAEVRHVAGLARLAITDEEVTHFTEQLTKILEFAEQLDELDTTGVEPTTHALDLK
CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
NVLRKDEVRPSLPREEVERMAPDWENGQVRVPAVFE
HHHHHHCCCCCCCHHHHHHHCCCCCCCCEECCEECC
>Mature Secondary Structure 
ARITEAEVRHVAGLARLAITDEEVTHFTEQLTKILEFAEQLDELDTTGVEPTTHALDLK
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
NVLRKDEVRPSLPREEVERMAPDWENGQVRVPAVFE
HHHHHHCCCCCCCHHHHHHHCCCCCCCCEECCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA