| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229916716
Identifier: 229916716
GI number: 229916716
Start: 929728
End: 931035
Strand: Reverse
Name: 229916716
Synonym: EAT1b_0989
Alternate gene names: NA
Gene position: 931035-929728 (Counterclockwise)
Preceding gene: 229916717
Following gene: 229916715
Centisome position: 31.04
GC content: 37.31
Gene sequence:
>1308_bases ATGAGTAAAATTATCTTTTCAGTGCAATCAATAGTAGAAGTCCTGCAAAATGGACATCTTAAAATCCCAGAGTATCAGCG ACCATATAAATGGGAACGTAGGCATATTCGCAACCTTTTTTATGATATACGAGAAGCTATTGATAAGAACGTGAGTGAGT ATCGAATCGGCTCAATCATTTTGCATCATAAAGACAGTGAAAATATAGATATCGTGGATGGACAGCAACGTTTGATTTCA ATTTCATTATTTCTGTATTTTGCCGCAAAAGACAATCTGCCTGACGGTGCTAGCAACTTACTAAACGCAAATTACATAGG CGCCTCACAGCTTCATGCAAAAGAAAACTATGATGAATGGCGTATTCTTTGTGGATTAATTTCGAAAGAAGAGGTCGACG TCATCAGCAACTTTATGATGAATCATTGCAAAGTTTCCGTCATCGAGATGCCATCAGAAGGTTTAACAGAAGCTTTTCAA CTGTTCGATTCCCAAAATAACCGTGGCAAGGCCTTAGAACCTCACGATTTGTTGAAAGCCTATCATTTACGATCAATTAA AGATCCGACAGAACGCACCATCGAAAAATGGGAAGAATTTGTTAACGACAAAGAATTTAATCTTCGCGATTTATTTGACA AGCATTTATTTAGAATAAGACGTTGGGTAAACGGTGATTCAGGATTGTCTCGAAAAAAGTATGGCAATGAATTAAAATTC ACTGAGCGATTTATTGATGATTTCAAGGGTGTTGACCTTCAAAATGCGTCATATCCCTACTTGCGGTTATACGAAGAATT ACGTAAACACGAAATTGGATTCCCTAATTCGATTTGTATGCCAATAATTAATGGGAATGCCTTCTTTGATTTTATCGAAT TCTCATATGAACTTTTCAAAAATAATTTCTATGAGGACAGTATAATAGACGGCTTTCTTTCAGATGAACTCCAAGAGATA GTGAACAGTAAGAAAAGCAAATATTCCAGAAACATCAATTTATTCACTAACCTACTCGCAACATTTGTAGATCGTTTTGG AGTGGAGGCACTCGACCGAGAAACGTGTGAGAAGATTTTCGTCTGGGCGTTTTATCCAAGAACTGCTGCAAAAGCAATAT ACGATACCACACTCGCAAATTATGCAGCGAGTGGGACATTCCAAAAGAAAAAAAGTCAGAAGCTGTTTCAAGAATTAGCG GTTTCGGCTACTCCACGCGAATTTGTTGCACGAATTAATACTGATTTACTTGGCAATCTAACTGCTTCAGACATTGCAAA TAAGCTTAATCAGGAGACGAAAAGGTGA
Upstream 100 bases:
>100_bases TACGATAAAGGGACAGAAGTACGTAATGATTGATGCGTTTAAAGTAGTAAACAATGAATGAACGTTTATCAAAAAAATTG AATCTACATGGAGACAAACG
Downstream 100 bases:
>100_bases ACAATCCTCTATCTATATTTGATTTACTGAATGATAATAGCTATTCAGTCCCACTGTATCAACGAAATTTTGCGTGGACT GACGTAGAAATCACACAACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 435; Mature: 434
Protein sequence:
>435_residues MSKIIFSVQSIVEVLQNGHLKIPEYQRPYKWERRHIRNLFYDIREAIDKNVSEYRIGSIILHHKDSENIDIVDGQQRLIS ISLFLYFAAKDNLPDGASNLLNANYIGASQLHAKENYDEWRILCGLISKEEVDVISNFMMNHCKVSVIEMPSEGLTEAFQ LFDSQNNRGKALEPHDLLKAYHLRSIKDPTERTIEKWEEFVNDKEFNLRDLFDKHLFRIRRWVNGDSGLSRKKYGNELKF TERFIDDFKGVDLQNASYPYLRLYEELRKHEIGFPNSICMPIINGNAFFDFIEFSYELFKNNFYEDSIIDGFLSDELQEI VNSKKSKYSRNINLFTNLLATFVDRFGVEALDRETCEKIFVWAFYPRTAAKAIYDTTLANYAASGTFQKKKSQKLFQELA VSATPREFVARINTDLLGNLTASDIANKLNQETKR
Sequences:
>Translated_435_residues MSKIIFSVQSIVEVLQNGHLKIPEYQRPYKWERRHIRNLFYDIREAIDKNVSEYRIGSIILHHKDSENIDIVDGQQRLIS ISLFLYFAAKDNLPDGASNLLNANYIGASQLHAKENYDEWRILCGLISKEEVDVISNFMMNHCKVSVIEMPSEGLTEAFQ LFDSQNNRGKALEPHDLLKAYHLRSIKDPTERTIEKWEEFVNDKEFNLRDLFDKHLFRIRRWVNGDSGLSRKKYGNELKF TERFIDDFKGVDLQNASYPYLRLYEELRKHEIGFPNSICMPIINGNAFFDFIEFSYELFKNNFYEDSIIDGFLSDELQEI VNSKKSKYSRNINLFTNLLATFVDRFGVEALDRETCEKIFVWAFYPRTAAKAIYDTTLANYAASGTFQKKKSQKLFQELA VSATPREFVARINTDLLGNLTASDIANKLNQETKR >Mature_434_residues SKIIFSVQSIVEVLQNGHLKIPEYQRPYKWERRHIRNLFYDIREAIDKNVSEYRIGSIILHHKDSENIDIVDGQQRLISI SLFLYFAAKDNLPDGASNLLNANYIGASQLHAKENYDEWRILCGLISKEEVDVISNFMMNHCKVSVIEMPSEGLTEAFQL FDSQNNRGKALEPHDLLKAYHLRSIKDPTERTIEKWEEFVNDKEFNLRDLFDKHLFRIRRWVNGDSGLSRKKYGNELKFT ERFIDDFKGVDLQNASYPYLRLYEELRKHEIGFPNSICMPIINGNAFFDFIEFSYELFKNNFYEDSIIDGFLSDELQEIV NSKKSKYSRNINLFTNLLATFVDRFGVEALDRETCEKIFVWAFYPRTAAKAIYDTTLANYAASGTFQKKKSQKLFQELAV SATPREFVARINTDLLGNLTASDIANKLNQETKR
Specific function: Unknown
COG id: COG1479
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50774; Mature: 50643
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKIIFSVQSIVEVLQNGHLKIPEYQRPYKWERRHIRNLFYDIREAIDKNVSEYRIGSII CCHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCEEE LHHKDSENIDIVDGQQRLISISLFLYFAAKDNLPDGASNLLNANYIGASQLHAKENYDEW EEECCCCCCEEECCHHHHHHHHHHHEEEECCCCCCCHHHHCCCCCCCHHHHHHHCCCHHH RILCGLISKEEVDVISNFMMNHCKVSVIEMPSEGLTEAFQLFDSQNNRGKALEPHDLLKA HHHHHHHCHHHHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCHHHHHHH YHLRSIKDPTERTIEKWEEFVNDKEFNLRDLFDKHLFRIRRWVNGDSGLSRKKYGNELKF HHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHH TERFIDDFKGVDLQNASYPYLRLYEELRKHEIGFPNSICMPIINGNAFFDFIEFSYELFK HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHH NNFYEDSIIDGFLSDELQEIVNSKKSKYSRNINLFTNLLATFVDRFGVEALDRETCEKIF CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHEE VWAFYPRTAAKAIYDTTLANYAASGTFQKKKSQKLFQELAVSATPREFVARINTDLLGNL EEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHCCC TASDIANKLNQETKR HHHHHHHHHHHHCCC >Mature Secondary Structure SKIIFSVQSIVEVLQNGHLKIPEYQRPYKWERRHIRNLFYDIREAIDKNVSEYRIGSII CHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCEEE LHHKDSENIDIVDGQQRLISISLFLYFAAKDNLPDGASNLLNANYIGASQLHAKENYDEW EEECCCCCCEEECCHHHHHHHHHHHEEEECCCCCCCHHHHCCCCCCCHHHHHHHCCCHHH RILCGLISKEEVDVISNFMMNHCKVSVIEMPSEGLTEAFQLFDSQNNRGKALEPHDLLKA HHHHHHHCHHHHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCHHHHHHH YHLRSIKDPTERTIEKWEEFVNDKEFNLRDLFDKHLFRIRRWVNGDSGLSRKKYGNELKF HHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHH TERFIDDFKGVDLQNASYPYLRLYEELRKHEIGFPNSICMPIINGNAFFDFIEFSYELFK HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHH NNFYEDSIIDGFLSDELQEIVNSKKSKYSRNINLFTNLLATFVDRFGVEALDRETCEKIF CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHEE VWAFYPRTAAKAIYDTTLANYAASGTFQKKKSQKLFQELAVSATPREFVARINTDLLGNL EEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHCCC TASDIANKLNQETKR HHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA