Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

Click here to switch to the map view.

The map label for this gene is 229916716

Identifier: 229916716

GI number: 229916716

Start: 929728

End: 931035

Strand: Reverse

Name: 229916716

Synonym: EAT1b_0989

Alternate gene names: NA

Gene position: 931035-929728 (Counterclockwise)

Preceding gene: 229916717

Following gene: 229916715

Centisome position: 31.04

GC content: 37.31

Gene sequence:

>1308_bases
ATGAGTAAAATTATCTTTTCAGTGCAATCAATAGTAGAAGTCCTGCAAAATGGACATCTTAAAATCCCAGAGTATCAGCG
ACCATATAAATGGGAACGTAGGCATATTCGCAACCTTTTTTATGATATACGAGAAGCTATTGATAAGAACGTGAGTGAGT
ATCGAATCGGCTCAATCATTTTGCATCATAAAGACAGTGAAAATATAGATATCGTGGATGGACAGCAACGTTTGATTTCA
ATTTCATTATTTCTGTATTTTGCCGCAAAAGACAATCTGCCTGACGGTGCTAGCAACTTACTAAACGCAAATTACATAGG
CGCCTCACAGCTTCATGCAAAAGAAAACTATGATGAATGGCGTATTCTTTGTGGATTAATTTCGAAAGAAGAGGTCGACG
TCATCAGCAACTTTATGATGAATCATTGCAAAGTTTCCGTCATCGAGATGCCATCAGAAGGTTTAACAGAAGCTTTTCAA
CTGTTCGATTCCCAAAATAACCGTGGCAAGGCCTTAGAACCTCACGATTTGTTGAAAGCCTATCATTTACGATCAATTAA
AGATCCGACAGAACGCACCATCGAAAAATGGGAAGAATTTGTTAACGACAAAGAATTTAATCTTCGCGATTTATTTGACA
AGCATTTATTTAGAATAAGACGTTGGGTAAACGGTGATTCAGGATTGTCTCGAAAAAAGTATGGCAATGAATTAAAATTC
ACTGAGCGATTTATTGATGATTTCAAGGGTGTTGACCTTCAAAATGCGTCATATCCCTACTTGCGGTTATACGAAGAATT
ACGTAAACACGAAATTGGATTCCCTAATTCGATTTGTATGCCAATAATTAATGGGAATGCCTTCTTTGATTTTATCGAAT
TCTCATATGAACTTTTCAAAAATAATTTCTATGAGGACAGTATAATAGACGGCTTTCTTTCAGATGAACTCCAAGAGATA
GTGAACAGTAAGAAAAGCAAATATTCCAGAAACATCAATTTATTCACTAACCTACTCGCAACATTTGTAGATCGTTTTGG
AGTGGAGGCACTCGACCGAGAAACGTGTGAGAAGATTTTCGTCTGGGCGTTTTATCCAAGAACTGCTGCAAAAGCAATAT
ACGATACCACACTCGCAAATTATGCAGCGAGTGGGACATTCCAAAAGAAAAAAAGTCAGAAGCTGTTTCAAGAATTAGCG
GTTTCGGCTACTCCACGCGAATTTGTTGCACGAATTAATACTGATTTACTTGGCAATCTAACTGCTTCAGACATTGCAAA
TAAGCTTAATCAGGAGACGAAAAGGTGA

Upstream 100 bases:

>100_bases
TACGATAAAGGGACAGAAGTACGTAATGATTGATGCGTTTAAAGTAGTAAACAATGAATGAACGTTTATCAAAAAAATTG
AATCTACATGGAGACAAACG

Downstream 100 bases:

>100_bases
ACAATCCTCTATCTATATTTGATTTACTGAATGATAATAGCTATTCAGTCCCACTGTATCAACGAAATTTTGCGTGGACT
GACGTAGAAATCACACAACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 435; Mature: 434

Protein sequence:

>435_residues
MSKIIFSVQSIVEVLQNGHLKIPEYQRPYKWERRHIRNLFYDIREAIDKNVSEYRIGSIILHHKDSENIDIVDGQQRLIS
ISLFLYFAAKDNLPDGASNLLNANYIGASQLHAKENYDEWRILCGLISKEEVDVISNFMMNHCKVSVIEMPSEGLTEAFQ
LFDSQNNRGKALEPHDLLKAYHLRSIKDPTERTIEKWEEFVNDKEFNLRDLFDKHLFRIRRWVNGDSGLSRKKYGNELKF
TERFIDDFKGVDLQNASYPYLRLYEELRKHEIGFPNSICMPIINGNAFFDFIEFSYELFKNNFYEDSIIDGFLSDELQEI
VNSKKSKYSRNINLFTNLLATFVDRFGVEALDRETCEKIFVWAFYPRTAAKAIYDTTLANYAASGTFQKKKSQKLFQELA
VSATPREFVARINTDLLGNLTASDIANKLNQETKR

Sequences:

>Translated_435_residues
MSKIIFSVQSIVEVLQNGHLKIPEYQRPYKWERRHIRNLFYDIREAIDKNVSEYRIGSIILHHKDSENIDIVDGQQRLIS
ISLFLYFAAKDNLPDGASNLLNANYIGASQLHAKENYDEWRILCGLISKEEVDVISNFMMNHCKVSVIEMPSEGLTEAFQ
LFDSQNNRGKALEPHDLLKAYHLRSIKDPTERTIEKWEEFVNDKEFNLRDLFDKHLFRIRRWVNGDSGLSRKKYGNELKF
TERFIDDFKGVDLQNASYPYLRLYEELRKHEIGFPNSICMPIINGNAFFDFIEFSYELFKNNFYEDSIIDGFLSDELQEI
VNSKKSKYSRNINLFTNLLATFVDRFGVEALDRETCEKIFVWAFYPRTAAKAIYDTTLANYAASGTFQKKKSQKLFQELA
VSATPREFVARINTDLLGNLTASDIANKLNQETKR
>Mature_434_residues
SKIIFSVQSIVEVLQNGHLKIPEYQRPYKWERRHIRNLFYDIREAIDKNVSEYRIGSIILHHKDSENIDIVDGQQRLISI
SLFLYFAAKDNLPDGASNLLNANYIGASQLHAKENYDEWRILCGLISKEEVDVISNFMMNHCKVSVIEMPSEGLTEAFQL
FDSQNNRGKALEPHDLLKAYHLRSIKDPTERTIEKWEEFVNDKEFNLRDLFDKHLFRIRRWVNGDSGLSRKKYGNELKFT
ERFIDDFKGVDLQNASYPYLRLYEELRKHEIGFPNSICMPIINGNAFFDFIEFSYELFKNNFYEDSIIDGFLSDELQEIV
NSKKSKYSRNINLFTNLLATFVDRFGVEALDRETCEKIFVWAFYPRTAAKAIYDTTLANYAASGTFQKKKSQKLFQELAV
SATPREFVARINTDLLGNLTASDIANKLNQETKR

Specific function: Unknown

COG id: COG1479

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50774; Mature: 50643

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKIIFSVQSIVEVLQNGHLKIPEYQRPYKWERRHIRNLFYDIREAIDKNVSEYRIGSII
CCHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCEEE
LHHKDSENIDIVDGQQRLISISLFLYFAAKDNLPDGASNLLNANYIGASQLHAKENYDEW
EEECCCCCCEEECCHHHHHHHHHHHEEEECCCCCCCHHHHCCCCCCCHHHHHHHCCCHHH
RILCGLISKEEVDVISNFMMNHCKVSVIEMPSEGLTEAFQLFDSQNNRGKALEPHDLLKA
HHHHHHHCHHHHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCHHHHHHH
YHLRSIKDPTERTIEKWEEFVNDKEFNLRDLFDKHLFRIRRWVNGDSGLSRKKYGNELKF
HHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHH
TERFIDDFKGVDLQNASYPYLRLYEELRKHEIGFPNSICMPIINGNAFFDFIEFSYELFK
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHH
NNFYEDSIIDGFLSDELQEIVNSKKSKYSRNINLFTNLLATFVDRFGVEALDRETCEKIF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHEE
VWAFYPRTAAKAIYDTTLANYAASGTFQKKKSQKLFQELAVSATPREFVARINTDLLGNL
EEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHCCC
TASDIANKLNQETKR
HHHHHHHHHHHHCCC
>Mature Secondary Structure 
SKIIFSVQSIVEVLQNGHLKIPEYQRPYKWERRHIRNLFYDIREAIDKNVSEYRIGSII
CHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCEEE
LHHKDSENIDIVDGQQRLISISLFLYFAAKDNLPDGASNLLNANYIGASQLHAKENYDEW
EEECCCCCCEEECCHHHHHHHHHHHEEEECCCCCCCHHHHCCCCCCCHHHHHHHCCCHHH
RILCGLISKEEVDVISNFMMNHCKVSVIEMPSEGLTEAFQLFDSQNNRGKALEPHDLLKA
HHHHHHHCHHHHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCHHHHHHH
YHLRSIKDPTERTIEKWEEFVNDKEFNLRDLFDKHLFRIRRWVNGDSGLSRKKYGNELKF
HHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHH
TERFIDDFKGVDLQNASYPYLRLYEELRKHEIGFPNSICMPIINGNAFFDFIEFSYELFK
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHH
NNFYEDSIIDGFLSDELQEIVNSKKSKYSRNINLFTNLLATFVDRFGVEALDRETCEKIF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHEE
VWAFYPRTAAKAIYDTTLANYAASGTFQKKKSQKLFQELAVSATPREFVARINTDLLGNL
EEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHCCC
TASDIANKLNQETKR
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA