| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
Click here to switch to the map view.
The map label for this gene is 229916715
Identifier: 229916715
GI number: 229916715
Start: 927785
End: 929731
Strand: Reverse
Name: 229916715
Synonym: EAT1b_0988
Alternate gene names: NA
Gene position: 929731-927785 (Counterclockwise)
Preceding gene: 229916716
Following gene: 229916714
Centisome position: 30.99
GC content: 35.13
Gene sequence:
>1947_bases GTGAACAATCCTCTATCTATATTTGATTTACTGAATGATAATAGCTATTCAGTCCCACTGTATCAACGAAATTTTGCGTG GACTGACGTAGAAATCACACAACTGATAATAGATGTACTCGATTCGATCAAAGAAGGTCGTTCCGAGTATTTTATAGGCA CTCTCGTCGTAAGTAAGGATGGGGACGAATACTCGATCATCGATGGGCAACAGCGATTTACTTCTATACTCCTGATTGCT CTTGCGATTCAAAATGAATATGCTCCTTCCACAGAGTTCGTAAAAAAAATCAATTTGTGCTTTTCAGCACGAAAAAGATC CAATGATACGTTAAAAAGTTTATTTTTAAACGAGAGCATAACTGAAGAAACGTCAGGCAATGAATTACGACGTGGTTATA ATGAAACAGTGAGTGCTCTGAAAGAACATATAGGTTCTAATGACTATCGAAACATTTCAATTGAAACATTCTATCGATAC CTTTTCCGAAATGTGAAAATTTTTATTAGTGAGATGCCTGAAAACTTAGATGTTAAACTATATTTCGAACGATTCAATTC ACGCGGTGAACAATTGGAATATCATGAAATTATAAAAGCTGAGCTAATGCAACGACTTGTTGCAGAAGGAGTCGCATTTT CCAAAGTTCAAAAATTCGCTAAAATTTGGGATGCTTGTTCCGAATTCGAAACCCCTTGTATTCAGTTCTTCAATAAAAAA ACAAAGGGATCAGATGCTGACAAAGAACGAGAAAAAGTATTTAATTGCGAGTGGAGTGAATATGAACCAGGAAAGAATTC TTGGAGGTATGGATATAATCTTAAAAATATCTATTCGAACATGGTCGTTAACAAGGAAAATAAAAAATCGCTCATTAGCG CCATTGACGAAACGTCTATGAATGGTGCTGATGCAGATGTTCAATCTACAGGTAACGAGAATTCCAATAAATATCGATGT ATTGTGAATTTCAATACATTTCTTTATTATGTTTTGTATTTGACTGATCATGTAGAAGAGGACTCAATCCACTTGGATGA TAAAAAATTGAAATCAGCTTTTAAAGTATCTTCAAGAGATAGTCGATGGATACTGAGATTCGGGGAAAATTTACTGAAAG CGAAATTTATTTTTGATAATTTGATCATCCGGAATTCTCTTGAAACGACCAATAGGCGCAAAGAGGGAGAATGGTTTCTA CAAAAATCCTATCGCGAAGACAAGAACGAAAAAGCGAGAGGGCATTTATATGTTCAAACGCGATTTGATAAAAATTCTTT TTCGACCAATAATCACGAAATATTGATGTTGCAATCAATGTTTGCGGTCACATTTACAGCTTATAAAGATACTAAATGGT TATATTCAACGCTCAAATTTTTATTCGAACATACAGACGAGTTAAATGAGGCTGACTTCGGTAAAAAATTCGTTGCCTTT TTAGAGTCAATGTCTAAGAAATTTGCAAAAGAAAGAATATGTAACGATAGCGAACTTGATGCTCACAGTTTAAGATACGA TCATTTTGTGCCTGTATATGCTTTCAACTTAACCGACTATGTGTTATGGAAAAACAGAGAAAAGTTGAAACTAGACTATA CTACCATCAAGTTTGATGATTTCCACTTTACATACAGACGTTCAATTGAGCATTGGTATCCGCAAAATCCAAACGTGACC GAAGGGAAATCGAAAATGTCTGATGATTTGCTACACTGCTTCGGGAATCTATGTTTGATCGTGGCTAGTCAGAACTCTTC ATTCGGTAATCTTGATCCACTTGCCAAACTAGAGAATTGGCGAAATATTTTTTCTACTCAAAGTCTGAAGTTACAAATGA TGGCAGTGAGCAGCAAAAAATTTGGTGTTTGGAATGAAACGAAACGTAATGAAATTTTAGAAATGGAAAACGATATGTTG CAACTGCTGAGCGAATACATCTATTGA
Upstream 100 bases:
>100_bases CGGCTACTCCACGCGAATTTGTTGCACGAATTAATACTGATTTACTTGGCAATCTAACTGCTTCAGACATTGCAAATAAG CTTAATCAGGAGACGAAAAG
Downstream 100 bases:
>100_bases GTTTTTTGCTGGAAAAATAGTTTACAGTGCAAGATGTAAGGATGAAAGTATTTTGTCATTTTTTATAATGTAAAACCAAT CATGTACGTCGAGACGGTAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 648; Mature: 648
Protein sequence:
>648_residues MNNPLSIFDLLNDNSYSVPLYQRNFAWTDVEITQLIIDVLDSIKEGRSEYFIGTLVVSKDGDEYSIIDGQQRFTSILLIA LAIQNEYAPSTEFVKKINLCFSARKRSNDTLKSLFLNESITEETSGNELRRGYNETVSALKEHIGSNDYRNISIETFYRY LFRNVKIFISEMPENLDVKLYFERFNSRGEQLEYHEIIKAELMQRLVAEGVAFSKVQKFAKIWDACSEFETPCIQFFNKK TKGSDADKEREKVFNCEWSEYEPGKNSWRYGYNLKNIYSNMVVNKENKKSLISAIDETSMNGADADVQSTGNENSNKYRC IVNFNTFLYYVLYLTDHVEEDSIHLDDKKLKSAFKVSSRDSRWILRFGENLLKAKFIFDNLIIRNSLETTNRRKEGEWFL QKSYREDKNEKARGHLYVQTRFDKNSFSTNNHEILMLQSMFAVTFTAYKDTKWLYSTLKFLFEHTDELNEADFGKKFVAF LESMSKKFAKERICNDSELDAHSLRYDHFVPVYAFNLTDYVLWKNREKLKLDYTTIKFDDFHFTYRRSIEHWYPQNPNVT EGKSKMSDDLLHCFGNLCLIVASQNSSFGNLDPLAKLENWRNIFSTQSLKLQMMAVSSKKFGVWNETKRNEILEMENDML QLLSEYIY
Sequences:
>Translated_648_residues MNNPLSIFDLLNDNSYSVPLYQRNFAWTDVEITQLIIDVLDSIKEGRSEYFIGTLVVSKDGDEYSIIDGQQRFTSILLIA LAIQNEYAPSTEFVKKINLCFSARKRSNDTLKSLFLNESITEETSGNELRRGYNETVSALKEHIGSNDYRNISIETFYRY LFRNVKIFISEMPENLDVKLYFERFNSRGEQLEYHEIIKAELMQRLVAEGVAFSKVQKFAKIWDACSEFETPCIQFFNKK TKGSDADKEREKVFNCEWSEYEPGKNSWRYGYNLKNIYSNMVVNKENKKSLISAIDETSMNGADADVQSTGNENSNKYRC IVNFNTFLYYVLYLTDHVEEDSIHLDDKKLKSAFKVSSRDSRWILRFGENLLKAKFIFDNLIIRNSLETTNRRKEGEWFL QKSYREDKNEKARGHLYVQTRFDKNSFSTNNHEILMLQSMFAVTFTAYKDTKWLYSTLKFLFEHTDELNEADFGKKFVAF LESMSKKFAKERICNDSELDAHSLRYDHFVPVYAFNLTDYVLWKNREKLKLDYTTIKFDDFHFTYRRSIEHWYPQNPNVT EGKSKMSDDLLHCFGNLCLIVASQNSSFGNLDPLAKLENWRNIFSTQSLKLQMMAVSSKKFGVWNETKRNEILEMENDML QLLSEYIY >Mature_648_residues MNNPLSIFDLLNDNSYSVPLYQRNFAWTDVEITQLIIDVLDSIKEGRSEYFIGTLVVSKDGDEYSIIDGQQRFTSILLIA LAIQNEYAPSTEFVKKINLCFSARKRSNDTLKSLFLNESITEETSGNELRRGYNETVSALKEHIGSNDYRNISIETFYRY LFRNVKIFISEMPENLDVKLYFERFNSRGEQLEYHEIIKAELMQRLVAEGVAFSKVQKFAKIWDACSEFETPCIQFFNKK TKGSDADKEREKVFNCEWSEYEPGKNSWRYGYNLKNIYSNMVVNKENKKSLISAIDETSMNGADADVQSTGNENSNKYRC IVNFNTFLYYVLYLTDHVEEDSIHLDDKKLKSAFKVSSRDSRWILRFGENLLKAKFIFDNLIIRNSLETTNRRKEGEWFL QKSYREDKNEKARGHLYVQTRFDKNSFSTNNHEILMLQSMFAVTFTAYKDTKWLYSTLKFLFEHTDELNEADFGKKFVAF LESMSKKFAKERICNDSELDAHSLRYDHFVPVYAFNLTDYVLWKNREKLKLDYTTIKFDDFHFTYRRSIEHWYPQNPNVT EGKSKMSDDLLHCFGNLCLIVASQNSSFGNLDPLAKLENWRNIFSTQSLKLQMMAVSSKKFGVWNETKRNEILEMENDML QLLSEYIY
Specific function: Unknown
COG id: COG1479
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 76258; Mature: 76258
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNPLSIFDLLNDNSYSVPLYQRNFAWTDVEITQLIIDVLDSIKEGRSEYFIGTLVVSKD CCCCEEEHEEECCCCEECCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEECC GDEYSIIDGQQRFTSILLIALAIQNEYAPSTEFVKKINLCFSARKRSNDTLKSLFLNESI CCCEEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCC TEETSGNELRRGYNETVSALKEHIGSNDYRNISIETFYRYLFRNVKIFISEMPENLDVKL CCCCCCHHHHHCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHEECCCCCCCEEE YFERFNSRGEQLEYHEIIKAELMQRLVAEGVAFSKVQKFAKIWDACSEFETPCIQFFNKK EEHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCC TKGSDADKEREKVFNCEWSEYEPGKNSWRYGYNLKNIYSNMVVNKENKKSLISAIDETSM CCCCCCCHHHHHHCCCCCCCCCCCCCCCEECCCHHHHHHHHHCCCCHHHHHHHHHHHCCC NGADADVQSTGNENSNKYRCIVNFNTFLYYVLYLTDHVEEDSIHLDDKKLKSAFKVSSRD CCCCCCHHCCCCCCCCEEEEEEEHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHCCCCC SRWILRFGENLLKAKFIFDNLIIRNSLETTNRRKEGEWFLQKSYREDKNEKARGHLYVQT CHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEE RFDKNSFSTNNHEILMLQSMFAVTFTAYKDTKWLYSTLKFLFEHTDELNEADFGKKFVAF EECCCCCCCCCCEEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH LESMSKKFAKERICNDSELDAHSLRYDHFVPVYAFNLTDYVLWKNREKLKLDYTTIKFDD HHHHHHHHHHHHCCCCCCCCHHHCCCCCCCEEEEECCEEEEEECCCCEEEEEEEEEEEEC FHFTYRRSIEHWYPQNPNVTEGKSKMSDDLLHCFGNLCLIVASQNSSFGNLDPLAKLENW CHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHH RNIFSTQSLKLQMMAVSSKKFGVWNETKRNEILEMENDMLQLLSEYIY HHHHCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNNPLSIFDLLNDNSYSVPLYQRNFAWTDVEITQLIIDVLDSIKEGRSEYFIGTLVVSKD CCCCEEEHEEECCCCEECCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEECC GDEYSIIDGQQRFTSILLIALAIQNEYAPSTEFVKKINLCFSARKRSNDTLKSLFLNESI CCCEEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCC TEETSGNELRRGYNETVSALKEHIGSNDYRNISIETFYRYLFRNVKIFISEMPENLDVKL CCCCCCHHHHHCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHEECCCCCCCEEE YFERFNSRGEQLEYHEIIKAELMQRLVAEGVAFSKVQKFAKIWDACSEFETPCIQFFNKK EEHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCC TKGSDADKEREKVFNCEWSEYEPGKNSWRYGYNLKNIYSNMVVNKENKKSLISAIDETSM CCCCCCCHHHHHHCCCCCCCCCCCCCCCEECCCHHHHHHHHHCCCCHHHHHHHHHHHCCC NGADADVQSTGNENSNKYRCIVNFNTFLYYVLYLTDHVEEDSIHLDDKKLKSAFKVSSRD CCCCCCHHCCCCCCCCEEEEEEEHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHCCCCC SRWILRFGENLLKAKFIFDNLIIRNSLETTNRRKEGEWFLQKSYREDKNEKARGHLYVQT CHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEE RFDKNSFSTNNHEILMLQSMFAVTFTAYKDTKWLYSTLKFLFEHTDELNEADFGKKFVAF EECCCCCCCCCCEEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH LESMSKKFAKERICNDSELDAHSLRYDHFVPVYAFNLTDYVLWKNREKLKLDYTTIKFDD HHHHHHHHHHHHCCCCCCCCHHHCCCCCCCEEEEECCEEEEEECCCCEEEEEEEEEEEEC FHFTYRRSIEHWYPQNPNVTEGKSKMSDDLLHCFGNLCLIVASQNSSFGNLDPLAKLENW CHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHH RNIFSTQSLKLQMMAVSSKKFGVWNETKRNEILEMENDMLQLLSEYIY HHHHCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA