| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is yyaP [H]
Identifier: 229916714
GI number: 229916714
Start: 926996
End: 927589
Strand: Reverse
Name: yyaP [H]
Synonym: EAT1b_0987
Alternate gene names: 229916714
Gene position: 927589-926996 (Counterclockwise)
Preceding gene: 229916715
Following gene: 229916713
Centisome position: 30.92
GC content: 50.51
Gene sequence:
>594_bases ATGAGGAAAATCATTGTTCTGGAACATTTATCGTTAGACGGTGTCATTCAAGCACCGGGTGGGAAAGAAGAGGACTTGAG TGGGGATTTTATGCATGGGGGATGGACGGAGCCGTTTTCGAGTCAAGAGCTTGGCATTTGGATTCGGACGCAAATGCATA GTGAGTTTGATTTGTTGCTCGGTCGAAAGACATATGCTCAGTGGGCGAGTTATTGGCCGAATCACGATGACATTTGGCCG GAAGCCAACCGGGCGATGAAGTATGTGATCACGCGGCAGTCAACGGACTCACGATGGGAATCAACGACGTTTCTGACAGA GCCAGTCGAAGCGTTGAAACGACTCAAACAAGAAGAGGGACCCGATTTACACGTCTGGGGAAGCGGTGAACTCGTGCACA CGCTACTCGCAAACAATCTCATCGATGAAGTTCGACTGATCGTGTATCCCATCATCATCGGGTCAGGCAAACGACTTTTC CCAGACGGCAACATCTTGCCACTGCAACTTGACGTGATTGAGCAACAGCTGATGCCGAACGGGGTCCATGTCGTTCGGTA TGGACGCCTTCAATCGGAAGGGGAGAAGAGATGA
Upstream 100 bases:
>100_bases GGTAGCTTGGTTGGAAAAAGTAGAATAAGATGAATGTATCATGCCTTCGATTGACTCAATCGAGGGCTTTTTTTGCAAAC AGCCGAAAGGGGAGTCGGAG
Downstream 100 bases:
>100_bases GAATCGAGCAACATCTCGAAATGACCCTTTCAGAATCGATGGATAAGGAGCTGACCGAGCTACTGCAACACGCGTTTCCT TCCATCTATCCGAATCGTCG
Product: bifunctional deaminase-reductase domain protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MRKIIVLEHLSLDGVIQAPGGKEEDLSGDFMHGGWTEPFSSQELGIWIRTQMHSEFDLLLGRKTYAQWASYWPNHDDIWP EANRAMKYVITRQSTDSRWESTTFLTEPVEALKRLKQEEGPDLHVWGSGELVHTLLANNLIDEVRLIVYPIIIGSGKRLF PDGNILPLQLDVIEQQLMPNGVHVVRYGRLQSEGEKR
Sequences:
>Translated_197_residues MRKIIVLEHLSLDGVIQAPGGKEEDLSGDFMHGGWTEPFSSQELGIWIRTQMHSEFDLLLGRKTYAQWASYWPNHDDIWP EANRAMKYVITRQSTDSRWESTTFLTEPVEALKRLKQEEGPDLHVWGSGELVHTLLANNLIDEVRLIVYPIIIGSGKRLF PDGNILPLQLDVIEQQLMPNGVHVVRYGRLQSEGEKR >Mature_197_residues MRKIIVLEHLSLDGVIQAPGGKEEDLSGDFMHGGWTEPFSSQELGIWIRTQMHSEFDLLLGRKTYAQWASYWPNHDDIWP EANRAMKYVITRQSTDSRWESTTFLTEPVEALKRLKQEEGPDLHVWGSGELVHTLLANNLIDEVRLIVYPIIIGSGKRLF PDGNILPLQLDVIEQQLMPNGVHVVRYGRLQSEGEKR
Specific function: Unknown
COG id: COG0262
COG function: function code H; Dihydrofolate reductase
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis ywjB [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002734 [H]
Pfam domain/function: PF01872 RibD_C [H]
EC number: NA
Molecular weight: Translated: 22586; Mature: 22586
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKIIVLEHLSLDGVIQAPGGKEEDLSGDFMHGGWTEPFSSQELGIWIRTQMHSEFDLLL CCEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHH GRKTYAQWASYWPNHDDIWPEANRAMKYVITRQSTDSRWESTTFLTEPVEALKRLKQEEG CCHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCC PDLHVWGSGELVHTLLANNLIDEVRLIVYPIIIGSGKRLFPDGNILPLQLDVIEQQLMPN CCEEEECCCHHHHHHHHHHHHHHHHHHHEEEEECCCCEECCCCCEEEEEHHHHHHHHCCC GVHVVRYGRLQSEGEKR CEEEEEECCCCCCCCCC >Mature Secondary Structure MRKIIVLEHLSLDGVIQAPGGKEEDLSGDFMHGGWTEPFSSQELGIWIRTQMHSEFDLLL CCEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHH GRKTYAQWASYWPNHDDIWPEANRAMKYVITRQSTDSRWESTTFLTEPVEALKRLKQEEG CCHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCC PDLHVWGSGELVHTLLANNLIDEVRLIVYPIIIGSGKRLFPDGNILPLQLDVIEQQLMPN CCEEEECCCHHHHHHHHHHHHHHHHHHHEEEEECCCCEECCCCCEEEEEHHHHHHHHCCC GVHVVRYGRLQSEGEKR CEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]