| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229916633
Identifier: 229916633
GI number: 229916633
Start: 859697
End: 860362
Strand: Direct
Name: 229916633
Synonym: EAT1b_0905
Alternate gene names: NA
Gene position: 859697-860362 (Clockwise)
Preceding gene: 229916632
Following gene: 229916634
Centisome position: 28.66
GC content: 50.45
Gene sequence:
>666_bases ATGGCAGAACATTTATTTTTGAAGAAAGTCAAATGTCCGTATTGTTTACAGGAAAGTAAGACGAACCGTGTCTTATCACG TCACATCCGTCCGCTCGAGGTCGAGAAGGATGGTTACACGACGTATGACGGACCAAACCCGTATTTATACGAACCGACCG TCTGCGACCATTGTCACCTCGTCTTTCATGACTCGTTCGACAAGGTGCGCAAACATAACCGGGAAGCACTCGAGACGAAC TACTTCAATCAAGTGAATCCAGATGTGTTGAAAGGTGACCGCTCGTATGAGCACGTCATCCTCCTCTATAAGTTCGCCGT CATGACGGCCCAGTTGAGCGGACAAAAACCATCTGTCGTCGCCATGCTCGGGATGCGAATCGTATGGATGTACCGATTGA TTGGGGATACGGCATCTGAGAAGGAATGGATGCAGCGGACGCTCGATAAATACAATGAGGTGCAAGAAGCGTATACAGAC CCGATTCGTACCGGATTACCGTACGATCAACTTATGCTACGGATTGCCGACCTCTCGGCCGCGCTCGACTACTACGAGGA TGCGCGTCGTTGGTACGGGATTCTCTTAAGCAGCAAGGAAGTATCGGAGCGGATTCGGAACCAGGCCCGCGATCATTGGG AAGAGTTTCGGTTGGAGCATGCGTAA
Upstream 100 bases:
>100_bases GGATCAGGTCATCTCAGGTGAGGCCTCTCGCCTCTCCTTACTCGACCAGGTCGGTGAGATTCGCGGACTGCTCGTCAACG TCTATGTGTGAGGTGTCGAG
Downstream 100 bases:
>100_bases TCAGAAGTGTGGGACCTCGTGTCTCACACTTTTTGCATACAAAAAAATCGCGCTCATCCACTCACGGACAAACGCAATCG ACACAATTAATGGGTGAACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 221; Mature: 220
Protein sequence:
>221_residues MAEHLFLKKVKCPYCLQESKTNRVLSRHIRPLEVEKDGYTTYDGPNPYLYEPTVCDHCHLVFHDSFDKVRKHNREALETN YFNQVNPDVLKGDRSYEHVILLYKFAVMTAQLSGQKPSVVAMLGMRIVWMYRLIGDTASEKEWMQRTLDKYNEVQEAYTD PIRTGLPYDQLMLRIADLSAALDYYEDARRWYGILLSSKEVSERIRNQARDHWEEFRLEHA
Sequences:
>Translated_221_residues MAEHLFLKKVKCPYCLQESKTNRVLSRHIRPLEVEKDGYTTYDGPNPYLYEPTVCDHCHLVFHDSFDKVRKHNREALETN YFNQVNPDVLKGDRSYEHVILLYKFAVMTAQLSGQKPSVVAMLGMRIVWMYRLIGDTASEKEWMQRTLDKYNEVQEAYTD PIRTGLPYDQLMLRIADLSAALDYYEDARRWYGILLSSKEVSERIRNQARDHWEEFRLEHA >Mature_220_residues AEHLFLKKVKCPYCLQESKTNRVLSRHIRPLEVEKDGYTTYDGPNPYLYEPTVCDHCHLVFHDSFDKVRKHNREALETNY FNQVNPDVLKGDRSYEHVILLYKFAVMTAQLSGQKPSVVAMLGMRIVWMYRLIGDTASEKEWMQRTLDKYNEVQEAYTDP IRTGLPYDQLMLRIADLSAALDYYEDARRWYGILLSSKEVSERIRNQARDHWEEFRLEHA
Specific function: Unknown
COG id: COG1655
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26187; Mature: 26056
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEHLFLKKVKCPYCLQESKTNRVLSRHIRPLEVEKDGYTTYDGPNPYLYEPTVCDHCHL CCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCEEECCCCCCCEEE VFHDSFDKVRKHNREALETNYFNQVNPDVLKGDRSYEHVILLYKFAVMTAQLSGQKPSVV EEECCHHHHHHHCHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHH AMLGMRIVWMYRLIGDTASEKEWMQRTLDKYNEVQEAYTDPIRTGLPYDQLMLRIADLSA HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH ALDYYEDARRWYGILLSSKEVSERIRNQARDHWEEFRLEHA HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure AEHLFLKKVKCPYCLQESKTNRVLSRHIRPLEVEKDGYTTYDGPNPYLYEPTVCDHCHL CCCHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCEEECCCCCCCEEE VFHDSFDKVRKHNREALETNYFNQVNPDVLKGDRSYEHVILLYKFAVMTAQLSGQKPSVV EEECCHHHHHHHCHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHH AMLGMRIVWMYRLIGDTASEKEWMQRTLDKYNEVQEAYTDPIRTGLPYDQLMLRIADLSA HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH ALDYYEDARRWYGILLSSKEVSERIRNQARDHWEEFRLEHA HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA