Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

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The map label for this gene is yaaR [H]

Identifier: 229916632

GI number: 229916632

Start: 859244

End: 859687

Strand: Direct

Name: yaaR [H]

Synonym: EAT1b_0904

Alternate gene names: 229916632

Gene position: 859244-859687 (Clockwise)

Preceding gene: 229916631

Following gene: 229916633

Centisome position: 28.64

GC content: 54.95

Gene sequence:

>444_bases
ATGGACATTCGTCGCATCATGGAGACGCAATCGCTCCTCGGCTCAAGCAAGGCGAAACGCCCCGAAGTCGAACCCGGCGT
CTCCTTCCAAAACGTGATCGGTCAAAAACGCGAAGATCGGGAATACGAACGCTTCCAGCGTCAAATCGCCGCGATTCATG
AACAAGGAGAACTGCTCGCCGAGAGTCAGACCGTCGAGGCGCTCGCCGACTACAAACAAATGATTAAAGACTTTATGAAA
GAGGCCGTTGACGCGGCACTCCGTCTTGAGGACAAACGTGGATTCAATCGCCGCGGCCGCGCGAAGATTTATAAGGTCGT
CGAACAAGTCGACCAAAAACTCCTCGCGCTGACGGATCAGGTCATCTCAGGTGAGGCCTCTCGCCTCTCCTTACTCGACC
AGGTCGGTGAGATTCGCGGACTGCTCGTCAACGTCTATGTGTGA

Upstream 100 bases:

>100_bases
CTTGAATCAGTCCGGCATGGCGATGATTGCCCAGTCGAACGCATTGCCGCAAGGCGTGTTACAATTATTGAACTAACCTA
AAGAAAGGACGGTTGCCCAT

Downstream 100 bases:

>100_bases
GGTGTCGAGATGGCAGAACATTTATTTTTGAAGAAAGTCAAATGTCCGTATTGTTTACAGGAAAGTAAGACGAACCGTGT
CTTATCACGTCACATCCGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MDIRRIMETQSLLGSSKAKRPEVEPGVSFQNVIGQKREDREYERFQRQIAAIHEQGELLAESQTVEALADYKQMIKDFMK
EAVDAALRLEDKRGFNRRGRAKIYKVVEQVDQKLLALTDQVISGEASRLSLLDQVGEIRGLLVNVYV

Sequences:

>Translated_147_residues
MDIRRIMETQSLLGSSKAKRPEVEPGVSFQNVIGQKREDREYERFQRQIAAIHEQGELLAESQTVEALADYKQMIKDFMK
EAVDAALRLEDKRGFNRRGRAKIYKVVEQVDQKLLALTDQVISGEASRLSLLDQVGEIRGLLVNVYV
>Mature_147_residues
MDIRRIMETQSLLGSSKAKRPEVEPGVSFQNVIGQKREDREYERFQRQIAAIHEQGELLAESQTVEALADYKQMIKDFMK
EAVDAALRLEDKRGFNRRGRAKIYKVVEQVDQKLLALTDQVISGEASRLSLLDQVGEIRGLLVNVYV

Specific function: Unknown

COG id: COG1728

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005585 [H]

Pfam domain/function: PF03885 DUF327 [H]

EC number: NA

Molecular weight: Translated: 16808; Mature: 16808

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIRRIMETQSLLGSSKAKRPEVEPGVSFQNVIGQKREDREYERFQRQIAAIHEQGELLA
CCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
ESQTVEALADYKQMIKDFMKEAVDAALRLEDKRGFNRRGRAKIYKVVEQVDQKLLALTDQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
VISGEASRLSLLDQVGEIRGLLVNVYV
HHCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDIRRIMETQSLLGSSKAKRPEVEPGVSFQNVIGQKREDREYERFQRQIAAIHEQGELLA
CCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
ESQTVEALADYKQMIKDFMKEAVDAALRLEDKRGFNRRGRAKIYKVVEQVDQKLLALTDQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
VISGEASRLSLLDQVGEIRGLLVNVYV
HHCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]