Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

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The map label for this gene is yvlB [H]

Identifier: 229916611

GI number: 229916611

Start: 833891

End: 835060

Strand: Reverse

Name: yvlB [H]

Synonym: EAT1b_0883

Alternate gene names: 229916611

Gene position: 835060-833891 (Counterclockwise)

Preceding gene: 229916612

Following gene: 229916609

Centisome position: 27.84

GC content: 56.24

Gene sequence:

>1170_bases
GTGAAACAAGAAATGCGTGAACTGATTCTCCAGCAAGTGAAGGAAGGCAAGATGACAATCGAGGAGGCGATGACGCAACT
CGAACGTCTCGAGCGACTCGAACCGGAACAGGTTCAAGCGCTTGAAGAGCGACAGGATACAGAAAAGGTCGATGCCTATT
CGGTTGAATCGCTCACAACGAAACTGACATCTGCAGTGGAAGGGCTCGTGACGAAACTTCGCGACAGCGACTTTTCATTC
AGCTCGAACTTTGGTCCGGAAGTGACGTATTCGAAGTCGTTCCCGTTCACAGGTAGCGACATCTCGCTCGACCTGTTCAA
CGCGTCGGCGACGATCGTCTCGTCTGATGCTGAGGATTGTGAACTGATTGTCACGGGTCGTCCGCTTCGCCAACAAGACG
CGGATAAGGCGCTCGAACAGTTACAGTCTGCGGTCAAGCACTCTGTCATTGGGGATCGTCTCGTCGTCTCGCTCCGTGAC
AAGCTCGTCCGGGCCCACGTGGAACTGTACGTCCCGCACCACCATTTCAACCACCTGCTCGTTCAGACGTTGAACGGTGA
AGTCCGGGCCGATGGTCTCGATGTCGAGAACGTTCGTGTGCAAACCGCAAACGGTCGGGTCGTGCTCCATGACGTGCATG
CGTCGGAGCTCTTACTGAACACAGGGAATGGGACGGTCGAGGTCGAAGGTGTCGAAGCGGAACTCGTTCACGTCCGGACC
GGAAACGGTGCCGTCATCGTCGGTGGGAAGTACGATAAAGCCTCCCTCAAGACGGGGAACGGAAACATCCGCGCGGAACT
GGCGACAGCCCGTCCTGCCAAGTTTGAACTCGCGTCACTCGCCGGGAACATTCGACTCGTGTTACCACACGGCGTCGAGG
TCGAAGGGGAGCTCGAGACGAACTTCGGTGGTCTCCATTGCTTGCTCGATGAGCTCGAGATCATCCGTGACCGCAAGGAC
GTCGCACAGCGTCGTCTGGAATTCTTGTCGGGTCGTGGTCAAACCCCTCGCATCGAAGTCGAGGCGGGGACGCGTACCGG
TACGATCGATTTGGAGCACGGTTCGGTCTATACGCCATCCACATTCCTTGATGAGGATAAAGTGGAACCGGCTGACCCGG
TCGATCCCGTCGACCCAGGCGATTTAAACAATCCGTTCCATCAACAATAA

Upstream 100 bases:

>100_bases
CACGAGTGAAACCGAAAGCAGGAAAAAAGAAATAAGTATAGAAATGGTGAGAAACGGGAAGGTAATTGACGTGCAACCAA
ATTGAAGGGGGAAAACGAAC

Downstream 100 bases:

>100_bases
GCAAATCCCGAAGGCGGCGCCTTCGGGATTTTTTGATTATAGATTCATTTCGTACTCCATCTGTTGCCAATCCATCATCT
GCGTATCAAACAAAGTGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MKQEMRELILQQVKEGKMTIEEAMTQLERLERLEPEQVQALEERQDTEKVDAYSVESLTTKLTSAVEGLVTKLRDSDFSF
SSNFGPEVTYSKSFPFTGSDISLDLFNASATIVSSDAEDCELIVTGRPLRQQDADKALEQLQSAVKHSVIGDRLVVSLRD
KLVRAHVELYVPHHHFNHLLVQTLNGEVRADGLDVENVRVQTANGRVVLHDVHASELLLNTGNGTVEVEGVEAELVHVRT
GNGAVIVGGKYDKASLKTGNGNIRAELATARPAKFELASLAGNIRLVLPHGVEVEGELETNFGGLHCLLDELEIIRDRKD
VAQRRLEFLSGRGQTPRIEVEAGTRTGTIDLEHGSVYTPSTFLDEDKVEPADPVDPVDPGDLNNPFHQQ

Sequences:

>Translated_389_residues
MKQEMRELILQQVKEGKMTIEEAMTQLERLERLEPEQVQALEERQDTEKVDAYSVESLTTKLTSAVEGLVTKLRDSDFSF
SSNFGPEVTYSKSFPFTGSDISLDLFNASATIVSSDAEDCELIVTGRPLRQQDADKALEQLQSAVKHSVIGDRLVVSLRD
KLVRAHVELYVPHHHFNHLLVQTLNGEVRADGLDVENVRVQTANGRVVLHDVHASELLLNTGNGTVEVEGVEAELVHVRT
GNGAVIVGGKYDKASLKTGNGNIRAELATARPAKFELASLAGNIRLVLPHGVEVEGELETNFGGLHCLLDELEIIRDRKD
VAQRRLEFLSGRGQTPRIEVEAGTRTGTIDLEHGSVYTPSTFLDEDKVEPADPVDPVDPGDLNNPFHQQ
>Mature_389_residues
MKQEMRELILQQVKEGKMTIEEAMTQLERLERLEPEQVQALEERQDTEKVDAYSVESLTTKLTSAVEGLVTKLRDSDFSF
SSNFGPEVTYSKSFPFTGSDISLDLFNASATIVSSDAEDCELIVTGRPLRQQDADKALEQLQSAVKHSVIGDRLVVSLRD
KLVRAHVELYVPHHHFNHLLVQTLNGEVRADGLDVENVRVQTANGRVVLHDVHASELLLNTGNGTVEVEGVEAELVHVRT
GNGAVIVGGKYDKASLKTGNGNIRAELATARPAKFELASLAGNIRLVLPHGVEVEGELETNFGGLHCLLDELEIIRDRKD
VAQRRLEFLSGRGQTPRIEVEAGTRTGTIDLEHGSVYTPSTFLDEDKVEPADPVDPVDPGDLNNPFHQQ

Specific function: Unknown

COG id: COG3595

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016599 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42882; Mature: 42882

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQEMRELILQQVKEGKMTIEEAMTQLERLERLEPEQVQALEERQDTEKVDAYSVESLTT
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHH
KLTSAVEGLVTKLRDSDFSFSSNFGPEVTYSKSFPFTGSDISLDLFNASATIVSSDAEDC
HHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCEEEEEECCCEEEEECCCCCC
ELIVTGRPLRQQDADKALEQLQSAVKHSVIGDRLVVSLRDKLVRAHVELYVPHHHFNHLL
EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCHHHHHHH
VQTLNGEVRADGLDVENVRVQTANGRVVLHDVHASELLLNTGNGTVEVEGVEAELVHVRT
HHHCCCCEEECCCCCCEEEEEECCCEEEEEECCCCEEEEECCCCEEEEEECEEEEEEEEE
GNGAVIVGGKYDKASLKTGNGNIRAELATARPAKFELASLAGNIRLVLPHGVEVEGELET
CCCEEEECCCCCCCEEECCCCCEEEEEECCCCCCEEHHHHCCCEEEEECCCCEEECEEEC
NFGGLHCLLDELEIIRDRKDVAQRRLEFLSGRGQTPRIEVEAGTRTGTIDLEHGSVYTPS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEECCCCEECCC
TFLDEDKVEPADPVDPVDPGDLNNPFHQQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKQEMRELILQQVKEGKMTIEEAMTQLERLERLEPEQVQALEERQDTEKVDAYSVESLTT
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHH
KLTSAVEGLVTKLRDSDFSFSSNFGPEVTYSKSFPFTGSDISLDLFNASATIVSSDAEDC
HHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCEEEEEECCCEEEEECCCCCC
ELIVTGRPLRQQDADKALEQLQSAVKHSVIGDRLVVSLRDKLVRAHVELYVPHHHFNHLL
EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCHHHHHHH
VQTLNGEVRADGLDVENVRVQTANGRVVLHDVHASELLLNTGNGTVEVEGVEAELVHVRT
HHHCCCCEEECCCCCCEEEEEECCCEEEEEECCCCEEEEECCCCEEEEEECEEEEEEEEE
GNGAVIVGGKYDKASLKTGNGNIRAELATARPAKFELASLAGNIRLVLPHGVEVEGELET
CCCEEEECCCCCCCEEECCCCCEEEEEECCCCCCEEHHHHCCCEEEEECCCCEEECEEEC
NFGGLHCLLDELEIIRDRKDVAQRRLEFLSGRGQTPRIEVEAGTRTGTIDLEHGSVYTPS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEECCCCEECCC
TFLDEDKVEPADPVDPVDPGDLNNPFHQQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]