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The map label for this gene is ybbI [C]

Identifier: 229916597

GI number: 229916597

Start: 822484

End: 823236

Strand: Reverse

Name: ybbI [C]

Synonym: EAT1b_0869

Alternate gene names: 229916597

Gene position: 823236-822484 (Counterclockwise)

Preceding gene: 229916598

Following gene: 229916595

Centisome position: 27.44

GC content: 50.6

Gene sequence:

>753_bases
ATGATTGACCTGCCTCTAAGGGGCGACTGTACAGTGAAAGTAGGAGGTGGGGAAACCGTGATTCCAATCGGAAGAGTCGC
CCATGTGACCGGATTGTCGGTCAAGGCGATCAAATTTTATGAAGCGCGCGGATTGGTCCGCCCGACGCGGACCGAGAATC
AGTATCGAATGTACGGGATGGAAGAGATTCGACGGTTAAGTGAAATCAAACGATTACGTCAAATTGGACTCCGTCTAGAA
CAAATTCAATCGGGTCTACCGGTTGATACATTACTAGAAACACGATTGGATGAAATCCAGGCAGAAATCGAACGACTTCA
TCGAATCGAGAGGCAGATTCGATTGATGCAATCAGGAGGGAACGACATGAAGATTCGATATGAGATGTTGAATGAAGCCA
TTTCCGTCTATGGATATGGTGGTACGTTAGAGGAAATCCCGAACATGTGGGCCAAGCTTCAACCGGAATTGACGACAGAC
GAGTCGTACGGGGTCTGTCTCCCGCAGGAGAACGGTTATGTCGCGGGGATGACGAAGCCGGTGTCGGGAGAAAGTGCGCG
AAGTGTCGAACTGACGAAAGGGAACTATATCGTCGCGACGGTGGAGGGAGGCATCCCGATGATTCCGTCGACGTATGAGC
AGCTAGTAAATGTTCCAGATGTGACGCTACGAGACGCGGTCGACTTCGAGCGCTATATTCACGGGCAAGGTGGGGCGGAC
GACATCATTGAGATTTGGATGCCGATTGAATGA

Upstream 100 bases:

>100_bases
TCGTTCCGGATGAGCCGGGCATCTATCTCTATGAAGTCGGCGGAGAGTGGTCGCAAGGAGATAGCCGATACGTCTTCGGT
GTCCGGGTCCCTGAAAACTA

Downstream 100 bases:

>100_bases
AAAAGACGTTTCCCGCTCAAACGGGAAACGTCTTTTGTGTGATTAACGTGTCATGACTTTGTCGATGAGACCGTAGTCTT
TCGCTTGGTCAGCTGCCATG

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MerR Family Protein

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MIDLPLRGDCTVKVGGGETVIPIGRVAHVTGLSVKAIKFYEARGLVRPTRTENQYRMYGMEEIRRLSEIKRLRQIGLRLE
QIQSGLPVDTLLETRLDEIQAEIERLHRIERQIRLMQSGGNDMKIRYEMLNEAISVYGYGGTLEEIPNMWAKLQPELTTD
ESYGVCLPQENGYVAGMTKPVSGESARSVELTKGNYIVATVEGGIPMIPSTYEQLVNVPDVTLRDAVDFERYIHGQGGAD
DIIEIWMPIE

Sequences:

>Translated_250_residues
MIDLPLRGDCTVKVGGGETVIPIGRVAHVTGLSVKAIKFYEARGLVRPTRTENQYRMYGMEEIRRLSEIKRLRQIGLRLE
QIQSGLPVDTLLETRLDEIQAEIERLHRIERQIRLMQSGGNDMKIRYEMLNEAISVYGYGGTLEEIPNMWAKLQPELTTD
ESYGVCLPQENGYVAGMTKPVSGESARSVELTKGNYIVATVEGGIPMIPSTYEQLVNVPDVTLRDAVDFERYIHGQGGAD
DIIEIWMPIE
>Mature_250_residues
MIDLPLRGDCTVKVGGGETVIPIGRVAHVTGLSVKAIKFYEARGLVRPTRTENQYRMYGMEEIRRLSEIKRLRQIGLRLE
QIQSGLPVDTLLETRLDEIQAEIERLHRIERQIRLMQSGGNDMKIRYEMLNEAISVYGYGGTLEEIPNMWAKLQPELTTD
ESYGVCLPQENGYVAGMTKPVSGESARSVELTKGNYIVATVEGGIPMIPSTYEQLVNVPDVTLRDAVDFERYIHGQGGAD
DIIEIWMPIE

Specific function: Copper responsive transcription regulator [C]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786695, Length=100, Percent_Identity=39, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28127; Mature: 28127

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDLPLRGDCTVKVGGGETVIPIGRVAHVTGLSVKAIKFYEARGLVRPTRTENQYRMYGM
CCCCCCCCCEEEEECCCCEEEECCCCHHHCCCEEEEEEEEHHCCCCCCCCCCCCEEECCH
EEIRRLSEIKRLRQIGLRLEQIQSGLPVDTLLETRLDEIQAEIERLHRIERQIRLMQSGG
HHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NDMKIRYEMLNEAISVYGYGGTLEEIPNMWAKLQPELTTDESYGVCLPQENGYVAGMTKP
CCEEEHHHHHHHHHHEEECCCCHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEECCCC
VSGESARSVELTKGNYIVATVEGGIPMIPSTYEQLVNVPDVTLRDAVDFERYIHGQGGAD
CCCCCCCEEEEECCCEEEEEECCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCC
DIIEIWMPIE
CEEEEEECCC
>Mature Secondary Structure
MIDLPLRGDCTVKVGGGETVIPIGRVAHVTGLSVKAIKFYEARGLVRPTRTENQYRMYGM
CCCCCCCCCEEEEECCCCEEEECCCCHHHCCCEEEEEEEEHHCCCCCCCCCCCCEEECCH
EEIRRLSEIKRLRQIGLRLEQIQSGLPVDTLLETRLDEIQAEIERLHRIERQIRLMQSGG
HHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NDMKIRYEMLNEAISVYGYGGTLEEIPNMWAKLQPELTTDESYGVCLPQENGYVAGMTKP
CCEEEHHHHHHHHHHEEECCCCHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEECCCC
VSGESARSVELTKGNYIVATVEGGIPMIPSTYEQLVNVPDVTLRDAVDFERYIHGQGGAD
CCCCCCCEEEEECCCEEEEEECCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCC
DIIEIWMPIE
CEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA