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The map label for this gene is cggR [H]

Identifier: 229916593

GI number: 229916593

Start: 818977

End: 820005

Strand: Reverse

Name: cggR [H]

Synonym: EAT1b_0865

Alternate gene names: 229916593

Gene position: 820005-818977 (Counterclockwise)

Preceding gene: 229916594

Following gene: 229916592

Centisome position: 27.33

GC content: 52.28

Gene sequence:

>1029_bases
ATGATCCAGCAACTGATTCACGTTCAGAAGCAAATTGTCCCTGACCTGCTCGATACGCTCCGACATCGTTACGATATCTT
ACATTATGTCCGCTTGATGCAGCCGATTGGCCGCAGGACACTCGCGACGAGCTTGGGACTGACCGAACGGGTACTCAGAC
GAGAAGTCGACTTTTTGAAAGACCAAGGTCTTCTTTACGTCGCTACTCAAGGAATTTCCCTCAGTGAGACGGGACGAAAC
GTCTTACGAGACTTGCACGAGATCATGGGAGAACTTCTCGGGATCTCAGAAGTGGCAAGAGAGCTCGAAGAGAAATTAGG
GGTTCGCCAAGTCGTCATCGTACCGGGTGACTCGGATGAGACATTCTGGGTTCAACGCGATATCGGACGGGCGGCGGTCA
CGCAACTAAAAGCGCGGCTCGCACCGGATGATAATGTGATTGCGGTAACGGGAGGAACGACGATGGCATCGGTCGCGGCG
ATGATGTCGCCCGATAAAAAAGAACGCCCGATGCATTTCGTGCCCGCCCGTGGAGGTCTTGGAGAGACGCTTGAACTTCA
GGCGAACACCGTCTGTTCACGCATGGCGGACCGGGCCCACGCAGACTATCATCTTCTACATATTCCGGATGAAGTATCAC
AAGAAACATTCGACCGGATGGTGGAGGAACCTAGCATAAAAAATGTGCTGGAAATGATTAGAGCGGCGCGAATTGTGGTA
CATGGAATTGGTGAGGCAGAAACGATGGCAAAGCGCCGTCACGCATCACCGGAGCATTTGCGGATGATTGAACGGCATGA
CGCCGTCGCCGAGGCATTCGGATATTATTTCAATGCTGAAGGTGAAATCGTTCATCGCGTTAAGACGGTCGGGATCCAAC
TCGAAGAGCTGGATGACATGGATACCGTCATCGCGGTTGCCGGAGGGAAATCGAAGGCACAGGCGATCGCCGCTTATGCG
AAACACACGTCGAACATCATCCTCGTCACAGACGAAGGTGCGGCGAAAGAATTATTAACTTGTTATTAA

Upstream 100 bases:

>100_bases
CAGACGGAAAAGTGATTGATAAGATGAACTCGTAGCGGTGGGACGCAAATAAAAAAGTGGGACAAAAGTTGTCCACACTG
AAAGTCGAGGGGGTATGAGC

Downstream 100 bases:

>100_bases
AGAGTTGACCCCCCGTTGGCTCTTCAATAAATAGCTTCTACCCTAAGGAGGAAATTAACATGGCAGTAAAAGTTGGTATT
AACGGATTTGGACGTATCGG

Product: DeoR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MIQQLIHVQKQIVPDLLDTLRHRYDILHYVRLMQPIGRRTLATSLGLTERVLRREVDFLKDQGLLYVATQGISLSETGRN
VLRDLHEIMGELLGISEVARELEEKLGVRQVVIVPGDSDETFWVQRDIGRAAVTQLKARLAPDDNVIAVTGGTTMASVAA
MMSPDKKERPMHFVPARGGLGETLELQANTVCSRMADRAHADYHLLHIPDEVSQETFDRMVEEPSIKNVLEMIRAARIVV
HGIGEAETMAKRRHASPEHLRMIERHDAVAEAFGYYFNAEGEIVHRVKTVGIQLEELDDMDTVIAVAGGKSKAQAIAAYA
KHTSNIILVTDEGAAKELLTCY

Sequences:

>Translated_342_residues
MIQQLIHVQKQIVPDLLDTLRHRYDILHYVRLMQPIGRRTLATSLGLTERVLRREVDFLKDQGLLYVATQGISLSETGRN
VLRDLHEIMGELLGISEVARELEEKLGVRQVVIVPGDSDETFWVQRDIGRAAVTQLKARLAPDDNVIAVTGGTTMASVAA
MMSPDKKERPMHFVPARGGLGETLELQANTVCSRMADRAHADYHLLHIPDEVSQETFDRMVEEPSIKNVLEMIRAARIVV
HGIGEAETMAKRRHASPEHLRMIERHDAVAEAFGYYFNAEGEIVHRVKTVGIQLEELDDMDTVIAVAGGKSKAQAIAAYA
KHTSNIILVTDEGAAKELLTCY
>Mature_342_residues
MIQQLIHVQKQIVPDLLDTLRHRYDILHYVRLMQPIGRRTLATSLGLTERVLRREVDFLKDQGLLYVATQGISLSETGRN
VLRDLHEIMGELLGISEVARELEEKLGVRQVVIVPGDSDETFWVQRDIGRAAVTQLKARLAPDDNVIAVTGGTTMASVAA
MMSPDKKERPMHFVPARGGLGETLELQANTVCSRMADRAHADYHLLHIPDEVSQETFDRMVEEPSIKNVLEMIRAARIVV
HGIGEAETMAKRRHASPEHLRMIERHDAVAEAFGYYFNAEGEIVHRVKTVGIQLEELDDMDTVIAVAGGKSKAQAIAAYA
KHTSNIILVTDEGAAKELLTCY

Specific function: Represses the transcription of the gapA gene [H]

COG id: COG2390

COG function: function code K; Transcriptional regulator, contains sigma factor-related N-terminal domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sorC transcriptional regulatory family [H]

Homologues:

Organism=Escherichia coli, GI1787791, Length=258, Percent_Identity=27.1317829457364, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007324
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04198 Sugar-bind [H]

EC number: NA

Molecular weight: Translated: 38125; Mature: 38125

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQQLIHVQKQIVPDLLDTLRHRYDILHYVRLMQPIGRRTLATSLGLTERVLRREVDFLK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DQGLLYVATQGISLSETGRNVLRDLHEIMGELLGISEVARELEEKLGVRQVVIVPGDSDE
CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCEEEEEEECCCCC
TFWVQRDIGRAAVTQLKARLAPDDNVIAVTGGTTMASVAAMMSPDKKERPMHFVPARGGL
EEEEEHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHCCCCCCCCCEEECCCCCC
GETLELQANTVCSRMADRAHADYHLLHIPDEVSQETFDRMVEEPSIKNVLEMIRAARIVV
CCEEEHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
HGIGEAETMAKRRHASPEHLRMIERHDAVAEAFGYYFNAEGEIVHRVKTVGIQLEELDDM
HCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHCCCHHHHCCC
DTVIAVAGGKSKAQAIAAYAKHTSNIILVTDEGAAKELLTCY
CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHCC
>Mature Secondary Structure
MIQQLIHVQKQIVPDLLDTLRHRYDILHYVRLMQPIGRRTLATSLGLTERVLRREVDFLK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DQGLLYVATQGISLSETGRNVLRDLHEIMGELLGISEVARELEEKLGVRQVVIVPGDSDE
CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCEEEEEEECCCCC
TFWVQRDIGRAAVTQLKARLAPDDNVIAVTGGTTMASVAAMMSPDKKERPMHFVPARGGL
EEEEEHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHCCCCCCCCCEEECCCCCC
GETLELQANTVCSRMADRAHADYHLLHIPDEVSQETFDRMVEEPSIKNVLEMIRAARIVV
CCEEEHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
HGIGEAETMAKRRHASPEHLRMIERHDAVAEAFGYYFNAEGEIVHRVKTVGIQLEELDDM
HCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHCCCHHHHCCC
DTVIAVAGGKSKAQAIAAYAKHTSNIILVTDEGAAKELLTCY
CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]