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The map label for this gene is 229916529

Identifier: 229916529

GI number: 229916529

Start: 753183

End: 754454

Strand: Reverse

Name: 229916529

Synonym: EAT1b_0800

Alternate gene names: NA

Gene position: 754454-753183 (Counterclockwise)

Preceding gene: 229916530

Following gene: 229916528

Centisome position: 25.15

GC content: 41.19

Gene sequence:

>1272_bases
ATGGTGATTGATGATCGAAGCATAGACCAATTTGATACGATTTGGAATGAGCATTACGGTAAAGTATTTGCTACGTGCAT
GCGATACGTACACCACATCGAAACAGCAGAAGACTTGACACAAGATGTATTTGAGACAGCTTTTTCACATTGGATGAAAA
AAGGCGTTCCCACTTATCCGTCATCATGGTTAATTAAAGTCGCAACGTACAAAGCAATCGATGATCTAAGAAGAACCAAA
AACTTCAATCAAAAATATGAAGTCCTTAAAACCGAGTACCTTGTTAAACAAAATTTCGCTAGCCAAATCGAACAAGATGC
CGACGTTGGAAATGATATGCTCCGCTTAATGTTGATGTCGTGCCACCCATCGCTTTCAAAAGAATCACAAGTCGCCTTAA
CGTTGAAATACGTTTGTGGATTGACGACGCATGACATAGCTAGTGCTTATTTGACAAGTGAGGTGACAATTTCACAACGA
ATTCTGCGGGCAAAGAAGAAAATTCAGAGATTGTCGATCCCCTTTCATTTACCTGATCCGGAAAATGACGACCAACATTT
GAACAGTGTCCTTCAAACCATCTACCTCATGTTCAACGAAGGGTATTTAAATTCAAGTGGGCATCAGCTCGTTCGTCATG
ATCTTTGTCATGAATCCATGCGTCTAGGGATGGATTTATCAGTATGGCGCCCAGGACATGCTGAAGTCGAAAGCTTGAAC
GCATTAATGTGTTTTCAAGCCTCTCGCTTATCAACGCGATTTAATCGAGAAGGTGAAATGGTGTTGTTAGAACATCAAGA
TCGTTCTAAGTGGGACCGAAAGTTGATTGATCAAGGGTTATCTCACTTATTACGTGCTATAGAGATCACGAAAACACCGG
GGTTCATCATGTATCAGGCATTGATTGCCGCACAACATGCTCAAGCGACACATTATGCACATACAGATTGGTCAACCATT
ATAAAGTTATATGATGGCTTATTCGAACTGACCGGTTCACTTGTGGTTGCACTGAATCGAACGGTGGCGATCTCAATGGT
TTATGGTCCGGATGTCGCATTAGAACAGATACGTCAAATTGAACAAACAGAGCGACTCCGACACTATCATTTACTCTATA
GCGTCAAAGGAAATTTGTTACATCGACTAGAGCGATATGATGAAGCATCTCGAGCTTTTCAACATGCGTCTACTCTAACG
GAAAATGAGAGGGAACGAGTATTTCTCACTCGACAAGCTCAAGCAAATCAATTGAATGGAAAGGAAGGATAA

Upstream 100 bases:

>100_bases
GAATAGAGTTACAAAAAAGTTTAAAAAACTTGTACATTCTGTCGAAATACGGTCGCTTCATTCGTTACATATATAAGGGA
CTTGTTTGAAGGGAGGCGGT

Downstream 100 bases:

>100_bases
GCATGTTATTTTTGGGAATCGGCTATTTTAATGCTGAAAAAATGGATGAAAAATCAGAACAGGAAATGGAGGGAATCATG
AATCAATGTGAACCGTTCAT

Product: RNA polymerase, sigma-24 subunit, ECF subfamily

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MVIDDRSIDQFDTIWNEHYGKVFATCMRYVHHIETAEDLTQDVFETAFSHWMKKGVPTYPSSWLIKVATYKAIDDLRRTK
NFNQKYEVLKTEYLVKQNFASQIEQDADVGNDMLRLMLMSCHPSLSKESQVALTLKYVCGLTTHDIASAYLTSEVTISQR
ILRAKKKIQRLSIPFHLPDPENDDQHLNSVLQTIYLMFNEGYLNSSGHQLVRHDLCHESMRLGMDLSVWRPGHAEVESLN
ALMCFQASRLSTRFNREGEMVLLEHQDRSKWDRKLIDQGLSHLLRAIEITKTPGFIMYQALIAAQHAQATHYAHTDWSTI
IKLYDGLFELTGSLVVALNRTVAISMVYGPDVALEQIRQIEQTERLRHYHLLYSVKGNLLHRLERYDEASRAFQHASTLT
ENERERVFLTRQAQANQLNGKEG

Sequences:

>Translated_423_residues
MVIDDRSIDQFDTIWNEHYGKVFATCMRYVHHIETAEDLTQDVFETAFSHWMKKGVPTYPSSWLIKVATYKAIDDLRRTK
NFNQKYEVLKTEYLVKQNFASQIEQDADVGNDMLRLMLMSCHPSLSKESQVALTLKYVCGLTTHDIASAYLTSEVTISQR
ILRAKKKIQRLSIPFHLPDPENDDQHLNSVLQTIYLMFNEGYLNSSGHQLVRHDLCHESMRLGMDLSVWRPGHAEVESLN
ALMCFQASRLSTRFNREGEMVLLEHQDRSKWDRKLIDQGLSHLLRAIEITKTPGFIMYQALIAAQHAQATHYAHTDWSTI
IKLYDGLFELTGSLVVALNRTVAISMVYGPDVALEQIRQIEQTERLRHYHLLYSVKGNLLHRLERYDEASRAFQHASTLT
ENERERVFLTRQAQANQLNGKEG
>Mature_423_residues
MVIDDRSIDQFDTIWNEHYGKVFATCMRYVHHIETAEDLTQDVFETAFSHWMKKGVPTYPSSWLIKVATYKAIDDLRRTK
NFNQKYEVLKTEYLVKQNFASQIEQDADVGNDMLRLMLMSCHPSLSKESQVALTLKYVCGLTTHDIASAYLTSEVTISQR
ILRAKKKIQRLSIPFHLPDPENDDQHLNSVLQTIYLMFNEGYLNSSGHQLVRHDLCHESMRLGMDLSVWRPGHAEVESLN
ALMCFQASRLSTRFNREGEMVLLEHQDRSKWDRKLIDQGLSHLLRAIEITKTPGFIMYQALIAAQHAQATHYAHTDWSTI
IKLYDGLFELTGSLVVALNRTVAISMVYGPDVALEQIRQIEQTERLRHYHLLYSVKGNLLHRLERYDEASRAFQHASTLT
ENERERVFLTRQAQANQLNGKEG

Specific function: Unknown

COG id: COG4941

COG function: function code K; Predicted RNA polymerase sigma factor containing a TPR repeat domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008940
- InterPro:   IPR014284
- InterPro:   IPR007627
- InterPro:   IPR013249
- InterPro:   IPR013325
- InterPro:   IPR013324 [H]

Pfam domain/function: PF04542 Sigma70_r2; PF08281 Sigma70_r4_2 [H]

EC number: NA

Molecular weight: Translated: 48945; Mature: 48945

Theoretical pI: Translated: 6.99; Mature: 6.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCC
>Mature Secondary Structure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CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11481430; 7751302 [H]