| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229916528
Identifier: 229916528
GI number: 229916528
Start: 752800
End: 753180
Strand: Reverse
Name: 229916528
Synonym: EAT1b_0799
Alternate gene names: NA
Gene position: 753180-752800 (Counterclockwise)
Preceding gene: 229916529
Following gene: 229916527
Centisome position: 25.11
GC content: 42.52
Gene sequence:
>381_bases ATGTTATTTTTGGGAATCGGCTATTTTAATGCTGAAAAAATGGATGAAAAATCAGAACAGGAAATGGAGGGAATCATGAA TCAATGTGAACCGTTCATGAAAGACCTTTATGCGAGTGACCGAGTGTTGTTAGACTTAGGACTTGATACACGTATGAAAG TGTTAAAGCGTCAATCAAATCAGATTACGGTGACGGATGGACCGTTCACTGAAACGAAAGAAGTGATTGGGAGTACATTC TTGATTGAAGCGGATGATCTCGAGGATGCAGTTCGCATCGCATCCCTGCATCCGACGACTCAAGTAGAAGGAGTAGAAGA GCTGGGGTGGAGACTGGAAGTTCGACCGATTCATTACATCTATGACCGTAAAGAAACGTGA
Upstream 100 bases:
>100_bases CTTTTCAACATGCGTCTACTCTAACGGAAAATGAGAGGGAACGAGTATTTCTCACTCGACAAGCTCAAGCAAATCAATTG AATGGAAAGGAAGGATAAGC
Downstream 100 bases:
>100_bases CACAGTAAGATTCAGACGGGACGCAATAGCGTTCCGTTTTGTTGTCGAGAATATTTTGTATAATGAAATAAGGAGGCGAT AACGTGACCCATCGATTTTT
Product: YCII-related
Products: NA
Alternate protein names: YCII-Related; DGPF Domain Superfamily
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MLFLGIGYFNAEKMDEKSEQEMEGIMNQCEPFMKDLYASDRVLLDLGLDTRMKVLKRQSNQITVTDGPFTETKEVIGSTF LIEADDLEDAVRIASLHPTTQVEGVEELGWRLEVRPIHYIYDRKET
Sequences:
>Translated_126_residues MLFLGIGYFNAEKMDEKSEQEMEGIMNQCEPFMKDLYASDRVLLDLGLDTRMKVLKRQSNQITVTDGPFTETKEVIGSTF LIEADDLEDAVRIASLHPTTQVEGVEELGWRLEVRPIHYIYDRKET >Mature_126_residues MLFLGIGYFNAEKMDEKSEQEMEGIMNQCEPFMKDLYASDRVLLDLGLDTRMKVLKRQSNQITVTDGPFTETKEVIGSTF LIEADDLEDAVRIASLHPTTQVEGVEELGWRLEVRPIHYIYDRKET
Specific function: Unknown
COG id: COG3795
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14534; Mature: 14534
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFLGIGYFNAEKMDEKSEQEMEGIMNQCEPFMKDLYASDRVLLDLGLDTRMKVLKRQSN CEEEEECCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHCCCC QITVTDGPFTETKEVIGSTFLIEADDLEDAVRIASLHPTTQVEGVEELGWRLEVRPIHYI EEEEECCCCHHHHHHHCCEEEEECCCHHHHHHHHCCCCCHHCCCHHHCCCEEEEEEEEEE YDRKET ECCCCC >Mature Secondary Structure MLFLGIGYFNAEKMDEKSEQEMEGIMNQCEPFMKDLYASDRVLLDLGLDTRMKVLKRQSN CEEEEECCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHCCCC QITVTDGPFTETKEVIGSTFLIEADDLEDAVRIASLHPTTQVEGVEELGWRLEVRPIHYI EEEEECCCCHHHHHHHCCEEEEECCCHHHHHHHHCCCCCHHCCCHHHCCCEEEEEEEEEE YDRKET ECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA