| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is yutM [H]
Identifier: 229916504
GI number: 229916504
Start: 731169
End: 731525
Strand: Reverse
Name: yutM [H]
Synonym: EAT1b_0774
Alternate gene names: 229916504
Gene position: 731525-731169 (Counterclockwise)
Preceding gene: 229916507
Following gene: 229916502
Centisome position: 24.39
GC content: 48.74
Gene sequence:
>357_bases ATGATTCATTTAACAGAATCAGCCGCACTTCAAGTGCAAGAGATGATGAAACAGACCGAACGTCCGGATGCGCAATATTT GCGAGTGAAAGTTCAAGGTGGCGGATGTACAGGACTTTCATACGGAATGGGCTTTGACGAAGAGAAAACGGACAAAGACG TTCAATTCGACCATCATGGTGTCCGCGTCATCGTTGCAGAAGCAGACCATGGGGTCGTTGATGGCCTTGAGATTGATTAT AAGCAGTCGATGCTCGGTGGCGGTTTCACAATCAAAAATCCCAATGCGATTGCAACATGCGGTTGCGGTTCGAGTTTCCG GACAGCGACGAACGCAGGTACGCCAGGAGAATGCTAA
Upstream 100 bases:
>100_bases AACGATTTAATTTTTTTTGTTACAGTTTAGTTATACAAGATAATCTACAAGATGACAAGTCAATTGACTTGAATTGAAGA TAAAATGAGGAGGAGTTCAG
Downstream 100 bases:
>100_bases AGAATAAGAACCGATCGCGAGTGCGATCGGTTCTTATTCTTCTTCTGTCAAAATCAAGCGAATGATTTTGGCGGTCACAT CAAGTTCGATATGGTGCTGC
Product: iron-sulfur cluster assembly accessory protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MIHLTESAALQVQEMMKQTERPDAQYLRVKVQGGGCTGLSYGMGFDEEKTDKDVQFDHHGVRVIVAEADHGVVDGLEIDY KQSMLGGGFTIKNPNAIATCGCGSSFRTATNAGTPGEC
Sequences:
>Translated_118_residues MIHLTESAALQVQEMMKQTERPDAQYLRVKVQGGGCTGLSYGMGFDEEKTDKDVQFDHHGVRVIVAEADHGVVDGLEIDY KQSMLGGGFTIKNPNAIATCGCGSSFRTATNAGTPGEC >Mature_118_residues MIHLTESAALQVQEMMKQTERPDAQYLRVKVQGGGCTGLSYGMGFDEEKTDKDVQFDHHGVRVIVAEADHGVVDGLEIDY KQSMLGGGFTIKNPNAIATCGCGSSFRTATNAGTPGEC
Specific function: Unknown
COG id: COG0316
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hesB/iscA family [H]
Homologues:
Organism=Homo sapiens, GI52426768, Length=105, Percent_Identity=35.2380952380952, Blast_Score=74, Evalue=2e-14, Organism=Homo sapiens, GI160420328, Length=106, Percent_Identity=35.8490566037736, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1786351, Length=105, Percent_Identity=36.1904761904762, Blast_Score=82, Evalue=7e-18, Organism=Escherichia coli, GI1788877, Length=105, Percent_Identity=36.1904761904762, Blast_Score=72, Evalue=9e-15, Organism=Escherichia coli, GI1787974, Length=105, Percent_Identity=31.4285714285714, Blast_Score=63, Evalue=6e-12, Organism=Caenorhabditis elegans, GI25146411, Length=105, Percent_Identity=31.4285714285714, Blast_Score=67, Evalue=2e-12, Organism=Caenorhabditis elegans, GI193209025, Length=105, Percent_Identity=31.4285714285714, Blast_Score=67, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71998452, Length=108, Percent_Identity=32.4074074074074, Blast_Score=64, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6323001, Length=106, Percent_Identity=30.188679245283, Blast_Score=68, Evalue=4e-13, Organism=Drosophila melanogaster, GI24642263, Length=105, Percent_Identity=34.2857142857143, Blast_Score=73, Evalue=5e-14, Organism=Drosophila melanogaster, GI24649697, Length=106, Percent_Identity=31.1320754716981, Blast_Score=64, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000361 - InterPro: IPR016092 - InterPro: IPR017870 [H]
Pfam domain/function: PF01521 Fe-S_biosyn [H]
EC number: NA
Molecular weight: Translated: 12626; Mature: 12626
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: PS01152 HESB
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIHLTESAALQVQEMMKQTERPDAQYLRVKVQGGGCTGLSYGMGFDEEKTDKDVQFDHHG CEEECCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCC VRVIVAEADHGVVDGLEIDYKQSMLGGGFTIKNPNAIATCGCGSSFRTATNAGTPGEC EEEEEEECCCCEECCEEECCHHHHCCCCEEEECCCEEEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIHLTESAALQVQEMMKQTERPDAQYLRVKVQGGGCTGLSYGMGFDEEKTDKDVQFDHHG CEEECCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCC VRVIVAEADHGVVDGLEIDYKQSMLGGGFTIKNPNAIATCGCGSSFRTATNAGTPGEC EEEEEEECCCCEECCEEECCHHHHCCCCEEEECCCEEEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]