| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229916502
Identifier: 229916502
GI number: 229916502
Start: 729913
End: 730767
Strand: Reverse
Name: 229916502
Synonym: EAT1b_0772
Alternate gene names: NA
Gene position: 730767-729913 (Counterclockwise)
Preceding gene: 229916504
Following gene: 229916500
Centisome position: 24.36
GC content: 50.88
Gene sequence:
>855_bases ATGAGAAAAGTATTGATATTCGGAGGGTCACGTTATTTCGGAAAACGGCTCGCATTGCGACTTGCTGAAGCAGGGGATGA TGTGACGATTGTGACGAGAGGGCAACTACAGGTGCCGGAAGCTGAAGGGATTCGGTCTGTCAAAGGAGACCGGCAATCGG TCGCGACGATGAAAGACTTGGCCCGCGAACGGTACGACCTCGTCTATGACAACATTTGTTTTACTCCGTATCAGGCAAAA ATCGCCTCGGATGCGTTCATGGACAAAGTCGGGAAATATGTGCTCACGTCGACGATGTCGGTCTACGCCCCTGGTCCTGA TTTAAAAGAGAGCGACTTCAATCCGCTCCATTACGAATATCATCTTGAATCCGAACATGACTACGGACAAGGGAAACGCG AGGCGGAATCTTTCTTCTTCCATCGCGCCTCTTTCCCGGTGGCGACCGTACGATTACCGATCGTGTTAGGTCCGGATGAC TATACAGACCGATTGAAGTTTTATGTAGATGCAATCCGGAACGAGGAACCGGTTGTCTTGCATCATCCAGAGGCGAAGAT GGGCTTCATCTCGAGTGCGGAAGCGGCCGCCTTCTTAGAATGGGTCGGTCGTGCCAATGTGACAGGACCGTTCAATGCGG CGAGTGATGGCCTCATTTCGATGGGGGCCTTGATGGAGCGAATCGGTCAACACGTCGGAAAACCCGTCCATATTATAAAA GATGGAGACTCGTCGCCGTATGATTCGGATGTCGACTATTATATGTCGATTGCTGAGGCGAAGAAGGCGGGGTTTGTGTT CACGCAACTCGATGACTGGATTGACCGGGTCATCGTTCAAACGATGAAAAGATAA
Upstream 100 bases:
>100_bases TATAAGAATAGCAAGAATACGAGTGAAAGTGGTAGATTAGTCTGTTTCTTTGAAGGGAAAATGAGTAGGGACGTCATTAC AAATGGGAGGATTCAGGGTC
Downstream 100 bases:
>100_bases AAAAACGCTTCTGTGGATGTGGTCCACAGAAGCGTTTTTGGTTATTTCCCAGCAAATACAGATGTCGAGTGTTGTGGATG ACGAGCGGTCGGGTCCACAA
Product: NAD-dependent epimerase/dehydratase
Products: NA
Alternate protein names: Reductase; NAD Dependent Epimerase/Dehydratase Family Protein; Isoflavone Reductase; Nucleoside-Diphosphate-Sugar Epimerase; NAD Dependent Epimerase/Dehydratase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; Dtdpglucose 4 6-Dehydratase-Like Protein; Isoflavone_redu Isoflavone Reductase; NAD Dependent Epimerase; NAD-Dependent Epimerase/Dehydratase Family Protein; NAD Dependent Epimerase/Dehydratase Family
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MRKVLIFGGSRYFGKRLALRLAEAGDDVTIVTRGQLQVPEAEGIRSVKGDRQSVATMKDLARERYDLVYDNICFTPYQAK IASDAFMDKVGKYVLTSTMSVYAPGPDLKESDFNPLHYEYHLESEHDYGQGKREAESFFFHRASFPVATVRLPIVLGPDD YTDRLKFYVDAIRNEEPVVLHHPEAKMGFISSAEAAAFLEWVGRANVTGPFNAASDGLISMGALMERIGQHVGKPVHIIK DGDSSPYDSDVDYYMSIAEAKKAGFVFTQLDDWIDRVIVQTMKR
Sequences:
>Translated_284_residues MRKVLIFGGSRYFGKRLALRLAEAGDDVTIVTRGQLQVPEAEGIRSVKGDRQSVATMKDLARERYDLVYDNICFTPYQAK IASDAFMDKVGKYVLTSTMSVYAPGPDLKESDFNPLHYEYHLESEHDYGQGKREAESFFFHRASFPVATVRLPIVLGPDD YTDRLKFYVDAIRNEEPVVLHHPEAKMGFISSAEAAAFLEWVGRANVTGPFNAASDGLISMGALMERIGQHVGKPVHIIK DGDSSPYDSDVDYYMSIAEAKKAGFVFTQLDDWIDRVIVQTMKR >Mature_284_residues MRKVLIFGGSRYFGKRLALRLAEAGDDVTIVTRGQLQVPEAEGIRSVKGDRQSVATMKDLARERYDLVYDNICFTPYQAK IASDAFMDKVGKYVLTSTMSVYAPGPDLKESDFNPLHYEYHLESEHDYGQGKREAESFFFHRASFPVATVRLPIVLGPDD YTDRLKFYVDAIRNEEPVVLHHPEAKMGFISSAEAAAFLEWVGRANVTGPFNAASDGLISMGALMERIGQHVGKPVHIIK DGDSSPYDSDVDYYMSIAEAKKAGFVFTQLDDWIDRVIVQTMKR
Specific function: Unknown
COG id: COG0451
COG function: function code MG; Nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31894; Mature: 31894
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKVLIFGGSRYFGKRLALRLAEAGDDVTIVTRGQLQVPEAEGIRSVKGDRQSVATMKDL CCEEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCEECCHHHCCHHHCCCHHHHHHHHHH ARERYDLVYDNICFTPYQAKIASDAFMDKVGKYVLTSTMSVYAPGPDLKESDFNPLHYEY HHHHHHHHHCCEECCCHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCEEEEE HLESEHDYGQGKREAESFFFHRASFPVATVRLPIVLGPDDYTDRLKFYVDAIRNEEPVVL EECCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEEECCCCHHHHHHHHHHHHCCCCCEEE HHPEAKMGFISSAEAAAFLEWVGRANVTGPFNAASDGLISMGALMERIGQHVGKPVHIIK ECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEE DGDSSPYDSDVDYYMSIAEAKKAGFVFTQLDDWIDRVIVQTMKR CCCCCCCCCCHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRKVLIFGGSRYFGKRLALRLAEAGDDVTIVTRGQLQVPEAEGIRSVKGDRQSVATMKDL CCEEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCEECCHHHCCHHHCCCHHHHHHHHHH ARERYDLVYDNICFTPYQAKIASDAFMDKVGKYVLTSTMSVYAPGPDLKESDFNPLHYEY HHHHHHHHHCCEECCCHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCEEEEE HLESEHDYGQGKREAESFFFHRASFPVATVRLPIVLGPDDYTDRLKFYVDAIRNEEPVVL EECCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEEECCCCHHHHHHHHHHHHCCCCCEEE HHPEAKMGFISSAEAAAFLEWVGRANVTGPFNAASDGLISMGALMERIGQHVGKPVHIIK ECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEE DGDSSPYDSDVDYYMSIAEAKKAGFVFTQLDDWIDRVIVQTMKR CCCCCCCCCCHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA