Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

Click here to switch to the map view.

The map label for this gene is 229916492

Identifier: 229916492

GI number: 229916492

Start: 716839

End: 717498

Strand: Reverse

Name: 229916492

Synonym: EAT1b_0762

Alternate gene names: NA

Gene position: 717498-716839 (Counterclockwise)

Preceding gene: 229916493

Following gene: 229916490

Centisome position: 23.92

GC content: 50.3

Gene sequence:

>660_bases
ATGGTAGGAGTAGGAATTGATGGTGCACGTGGCGGCTGGGTACGGATCACATACGACAGCATCTCACTTTGTTTAACGAT
TTCGGAGACGTTGGAGGAGTTACTGATTGATGGTGCCATGCATTTTGTGGATATGCCGAAAGATTTAGGAACGGTCGACC
ATCCGATCCGCGAATGCGATGCGTGGATGCGTTGCCGACTCAGCCAACGAAAGTCGTCCGTCTTCACTCCGCCGATTCAA
GAGGTGTTGCACGAAGCGACTTATGAGGAAGCGAATGAAAGGAGTCGGGCGTTGGTTGGTAAAGGGATTAGTAAACAAGC
GTGGAATCTTGTTCCCCGGATCCGTGAGTTTCAGCAGGTGAAGGCATCTGACGTTTACGAATCACATCCGGAAGTTTGTT
TCTCGGTCATGATGGGACATGAGGCCAGTCATTCGAAAAAGACGGTCGAAGGGCAGGATGAGCGAATCGAGTTACTTCGG
CAATACTCGAAAAGTTCTCCATGGAAATGGAAGATGTCGAACGTCCAAATCGACGATATTATCGATGCGTGTATCTTGGC
GGTAGCTGCCTATGAAGCGGGGACCAGTGGTCTCTCGCTCCAGCCGGCAGAATCCGATCAACCGGTAGTGGCTGTACCTC
AAATGAAAAAAGAGCGATGA

Upstream 100 bases:

>100_bases
TGTGGCCTATGCTACACGGTTTGGCCGAACCGTATTTGGTTAGGGAGTACAGTGTTTCTCGCCGTATTTGGCGTGTTGAT
GATGTTACAGGAGGTACGAC

Downstream 100 bases:

>100_bases
AATCAACATTTCATCGCTCTTTTGCTGTCGTCGTAGGCGGACCGACGATAAATCGCCATATGTAATGAAACACTTTGGCA
TTGTATACGGCTTTTAATAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MVGVGIDGARGGWVRITYDSISLCLTISETLEELLIDGAMHFVDMPKDLGTVDHPIRECDAWMRCRLSQRKSSVFTPPIQ
EVLHEATYEEANERSRALVGKGISKQAWNLVPRIREFQQVKASDVYESHPEVCFSVMMGHEASHSKKTVEGQDERIELLR
QYSKSSPWKWKMSNVQIDDIIDACILAVAAYEAGTSGLSLQPAESDQPVVAVPQMKKER

Sequences:

>Translated_219_residues
MVGVGIDGARGGWVRITYDSISLCLTISETLEELLIDGAMHFVDMPKDLGTVDHPIRECDAWMRCRLSQRKSSVFTPPIQ
EVLHEATYEEANERSRALVGKGISKQAWNLVPRIREFQQVKASDVYESHPEVCFSVMMGHEASHSKKTVEGQDERIELLR
QYSKSSPWKWKMSNVQIDDIIDACILAVAAYEAGTSGLSLQPAESDQPVVAVPQMKKER
>Mature_219_residues
MVGVGIDGARGGWVRITYDSISLCLTISETLEELLIDGAMHFVDMPKDLGTVDHPIRECDAWMRCRLSQRKSSVFTPPIQ
EVLHEATYEEANERSRALVGKGISKQAWNLVPRIREFQQVKASDVYESHPEVCFSVMMGHEASHSKKTVEGQDERIELLR
QYSKSSPWKWKMSNVQIDDIIDACILAVAAYEAGTSGLSLQPAESDQPVVAVPQMKKER

Specific function: Unknown

COG id: COG4923

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24577; Mature: 24577

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGVGIDGARGGWVRITYDSISLCLTISETLEELLIDGAMHFVDMPKDLGTVDHPIRECD
CCCCCCCCCCCCEEEEEECCCHHEEEHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHH
AWMRCRLSQRKSSVFTPPIQEVLHEATYEEANERSRALVGKGISKQAWNLVPRIREFQQV
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
KASDVYESHPEVCFSVMMGHEASHSKKTVEGQDERIELLRQYSKSSPWKWKMSNVQIDDI
HHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCHHHH
IDACILAVAAYEAGTSGLSLQPAESDQPVVAVPQMKKER
HHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCC
>Mature Secondary Structure
MVGVGIDGARGGWVRITYDSISLCLTISETLEELLIDGAMHFVDMPKDLGTVDHPIRECD
CCCCCCCCCCCCEEEEEECCCHHEEEHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHH
AWMRCRLSQRKSSVFTPPIQEVLHEATYEEANERSRALVGKGISKQAWNLVPRIREFQQV
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
KASDVYESHPEVCFSVMMGHEASHSKKTVEGQDERIELLRQYSKSSPWKWKMSNVQIDDI
HHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCHHHH
IDACILAVAAYEAGTSGLSLQPAESDQPVVAVPQMKKER
HHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA