| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is pepA [H]
Identifier: 229916493
GI number: 229916493
Start: 717631
End: 719070
Strand: Reverse
Name: pepA [H]
Synonym: EAT1b_0763
Alternate gene names: 229916493
Gene position: 719070-717631 (Counterclockwise)
Preceding gene: 229916495
Following gene: 229916492
Centisome position: 23.97
GC content: 52.01
Gene sequence:
>1440_bases ATGTATCAAATTGCTCAATTAAATTGGACCGATACTTACGAGACAATCGTCGTTGGGGTTGGAGCAGCTGACTCTATCGA TGAAGGACTCGACACATTGTTTGGTGGACGCGTCAAAGCACTCATTCAATCAGGAGACCTCTCTACGAAGACGGGAGAAG TGACGATTCTTCCGACATTCACGGGGGAGACGGCGCGTGTCTTATTTGTCGGACTCGGCCAACGAAATGACATGACGACC GAGAACGTTCGGAATTGGTTCGGGAAAGTCTCGAAACTGATCAAGTCACGTGGATTGAAGGACGTCGCCGTAGCGCTTGA TACGTTTACGGACGGTGCGGCACGCATATTCACAGAAGCATATGAAATGGCGACGTATGCCCATCCTACATATAAGTCTG CTCCAAAAGAAGCGGTCGAAGAACCGACGATCACGTTGCTCGGTGACGTGGATCAGACAGATATCGATGCGGGTGCGGCT TATGGGAAAGGGGTCAATGTCGCCCGTACATTGACGATGATGCCGGCCAATATTTTGACGGCGGAGACGTTAGCGGATTA CGCGGTTGAGTTGGCGAAACGTCATGATTTCAAATACCGCATCCTTGAAAAAGAAGAGATGGAAGGACTCGGGATGGGGG CATTGCTCGCAGTCAACCAAGGGTCGACGATTCCACCGAAATTGATTGTGCTCGAGTATCGTGGGGCAGAAGAGGCTCCG ATTGCCGTTGTCGGGAAGGGTGTCACGTTCGACACAGGCGGCTATTCAATCAAGCCGAAAGATGGCATCGTCGGGATGAA AGGGGATATGGGTGGCGCTGCTACCGTCCTCGGATTGTTCGAGACCCTCGGATTGACGCGACCAAAACGGAACGTGATTG GCATCATCGGTGCGACCGACAATATGATTTCTGGAGATGCGTTCAAACCAGATGATGTGATCACGGCCATGAATGGAAAG ACGATCGAAGTATTGAACACGGATGCAGAGGGACGTCTTGTGTTAGCGGATGCGGTCACGTTTGCGAAAACGTATGAACC AAAAGCCATCATCGATGTGGCTACGCTCACAGGTGGCGTTCTCGTCGCCCTCGGGACAGACGTGACGGGCTGTCTAACGA ACGACGATACTCTCTATCGTTCGCTTGAAGAGGCGAGCCGTGAAACGAACGAACTCGTGTGGCAGATGCCATATTTCGAT GTCTTCATCGACAAGGTGAGAAAATCGGAAGTTGCCGACTTGAACAACTCACCAGGTCGTTTCGGGCATATGATTTTTGG TGGCGCATTTGTCGGTGAGTTTGTCGGCGATACACCATGGCTACATCTCGATATTGCAGGAACGAGCGAACGAGCGGCAG CGAATGACCTCGGTCCGAAGGGGCCGACGGGTGTCATGGTTCGAACTCTCGCACGGATGATTGAATCGTGGGAGCGGTAA
Upstream 100 bases:
>100_bases AGCCCATGAATTCGAAGATTTCTTGACTCTTACGCATACTATTTCATTATTTTGGAGAAGTTCGTTATGCTTACCATATA TATAGAAGGGAAGTGGCAAT
Downstream 100 bases:
>100_bases GAGCAGGTGGCGTAATCGGTTTGGCGATTCTGTGTGGCCTATGCTACACGGTTTGGCCGAACCGTATTTGGTTAGGGAGT ACAGTGTTTCTCGCCGTATT
Product: leucyl aminopeptidase
Products: NA
Alternate protein names: Leucine aminopeptidase; LAP; Leucyl aminopeptidase [H]
Number of amino acids: Translated: 479; Mature: 479
Protein sequence:
>479_residues MYQIAQLNWTDTYETIVVGVGAADSIDEGLDTLFGGRVKALIQSGDLSTKTGEVTILPTFTGETARVLFVGLGQRNDMTT ENVRNWFGKVSKLIKSRGLKDVAVALDTFTDGAARIFTEAYEMATYAHPTYKSAPKEAVEEPTITLLGDVDQTDIDAGAA YGKGVNVARTLTMMPANILTAETLADYAVELAKRHDFKYRILEKEEMEGLGMGALLAVNQGSTIPPKLIVLEYRGAEEAP IAVVGKGVTFDTGGYSIKPKDGIVGMKGDMGGAATVLGLFETLGLTRPKRNVIGIIGATDNMISGDAFKPDDVITAMNGK TIEVLNTDAEGRLVLADAVTFAKTYEPKAIIDVATLTGGVLVALGTDVTGCLTNDDTLYRSLEEASRETNELVWQMPYFD VFIDKVRKSEVADLNNSPGRFGHMIFGGAFVGEFVGDTPWLHLDIAGTSERAAANDLGPKGPTGVMVRTLARMIESWER
Sequences:
>Translated_479_residues MYQIAQLNWTDTYETIVVGVGAADSIDEGLDTLFGGRVKALIQSGDLSTKTGEVTILPTFTGETARVLFVGLGQRNDMTT ENVRNWFGKVSKLIKSRGLKDVAVALDTFTDGAARIFTEAYEMATYAHPTYKSAPKEAVEEPTITLLGDVDQTDIDAGAA YGKGVNVARTLTMMPANILTAETLADYAVELAKRHDFKYRILEKEEMEGLGMGALLAVNQGSTIPPKLIVLEYRGAEEAP IAVVGKGVTFDTGGYSIKPKDGIVGMKGDMGGAATVLGLFETLGLTRPKRNVIGIIGATDNMISGDAFKPDDVITAMNGK TIEVLNTDAEGRLVLADAVTFAKTYEPKAIIDVATLTGGVLVALGTDVTGCLTNDDTLYRSLEEASRETNELVWQMPYFD VFIDKVRKSEVADLNNSPGRFGHMIFGGAFVGEFVGDTPWLHLDIAGTSERAAANDLGPKGPTGVMVRTLARMIESWER >Mature_479_residues MYQIAQLNWTDTYETIVVGVGAADSIDEGLDTLFGGRVKALIQSGDLSTKTGEVTILPTFTGETARVLFVGLGQRNDMTT ENVRNWFGKVSKLIKSRGLKDVAVALDTFTDGAARIFTEAYEMATYAHPTYKSAPKEAVEEPTITLLGDVDQTDIDAGAA YGKGVNVARTLTMMPANILTAETLADYAVELAKRHDFKYRILEKEEMEGLGMGALLAVNQGSTIPPKLIVLEYRGAEEAP IAVVGKGVTFDTGGYSIKPKDGIVGMKGDMGGAATVLGLFETLGLTRPKRNVIGIIGATDNMISGDAFKPDDVITAMNGK TIEVLNTDAEGRLVLADAVTFAKTYEPKAIIDVATLTGGVLVALGTDVTGCLTNDDTLYRSLEEASRETNELVWQMPYFD VFIDKVRKSEVADLNNSPGRFGHMIFGGAFVGEFVGDTPWLHLDIAGTSERAAANDLGPKGPTGVMVRTLARMIESWER
Specific function: Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides [H]
COG id: COG0260
COG function: function code E; Leucyl aminopeptidase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M17 family [H]
Homologues:
Organism=Homo sapiens, GI41393561, Length=462, Percent_Identity=35.4978354978355, Blast_Score=241, Evalue=1e-63, Organism=Homo sapiens, GI47155554, Length=354, Percent_Identity=34.7457627118644, Blast_Score=157, Evalue=3e-38, Organism=Escherichia coli, GI1790710, Length=485, Percent_Identity=36.2886597938144, Blast_Score=254, Evalue=1e-68, Organism=Escherichia coli, GI87082123, Length=322, Percent_Identity=38.8198757763975, Blast_Score=183, Evalue=2e-47, Organism=Caenorhabditis elegans, GI17556903, Length=288, Percent_Identity=38.8888888888889, Blast_Score=164, Evalue=1e-40, Organism=Caenorhabditis elegans, GI17565172, Length=146, Percent_Identity=41.0958904109589, Blast_Score=92, Evalue=5e-19, Organism=Drosophila melanogaster, GI24661038, Length=462, Percent_Identity=31.3852813852814, Blast_Score=200, Evalue=2e-51, Organism=Drosophila melanogaster, GI21355725, Length=463, Percent_Identity=31.1015118790497, Blast_Score=197, Evalue=1e-50, Organism=Drosophila melanogaster, GI161077148, Length=431, Percent_Identity=28.0742459396752, Blast_Score=177, Evalue=2e-44, Organism=Drosophila melanogaster, GI20130057, Length=431, Percent_Identity=28.0742459396752, Blast_Score=177, Evalue=2e-44, Organism=Drosophila melanogaster, GI20129969, Length=460, Percent_Identity=28.0434782608696, Blast_Score=173, Evalue=2e-43, Organism=Drosophila melanogaster, GI19922386, Length=460, Percent_Identity=28.0434782608696, Blast_Score=167, Evalue=1e-41, Organism=Drosophila melanogaster, GI21355645, Length=433, Percent_Identity=27.0207852193995, Blast_Score=166, Evalue=4e-41, Organism=Drosophila melanogaster, GI24662223, Length=433, Percent_Identity=27.0207852193995, Blast_Score=166, Evalue=4e-41, Organism=Drosophila melanogaster, GI24662227, Length=464, Percent_Identity=27.5862068965517, Blast_Score=165, Evalue=8e-41, Organism=Drosophila melanogaster, GI20129963, Length=436, Percent_Identity=27.9816513761468, Blast_Score=157, Evalue=1e-38, Organism=Drosophila melanogaster, GI221379063, Length=281, Percent_Identity=35.2313167259786, Blast_Score=155, Evalue=5e-38, Organism=Drosophila melanogaster, GI221379062, Length=281, Percent_Identity=35.2313167259786, Blast_Score=155, Evalue=5e-38, Organism=Drosophila melanogaster, GI21357381, Length=281, Percent_Identity=35.2313167259786, Blast_Score=155, Evalue=5e-38, Organism=Drosophila melanogaster, GI24646701, Length=254, Percent_Identity=28.740157480315, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI24646703, Length=254, Percent_Identity=28.740157480315, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI21358201, Length=254, Percent_Identity=28.740157480315, Blast_Score=80, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011356 - InterPro: IPR000819 - InterPro: IPR023042 - InterPro: IPR008283 [H]
Pfam domain/function: PF00883 Peptidase_M17; PF02789 Peptidase_M17_N [H]
EC number: =3.4.11.1; =3.4.11.10 [H]
Molecular weight: Translated: 51418; Mature: 51418
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: PS00631 CYTOSOL_AP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYQIAQLNWTDTYETIVVGVGAADSIDEGLDTLFGGRVKALIQSGDLSTKTGEVTILPTF CCEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHCCCEEEHEECCCCCCCCCCEEEEEEC TGETARVLFVGLGQRNDMTTENVRNWFGKVSKLIKSRGLKDVAVALDTFTDGAARIFTEA CCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEHHCCCCHHHHHHHH YEMATYAHPTYKSAPKEAVEEPTITLLGDVDQTDIDAGAAYGKGVNVARTLTMMPANILT HHHHHHCCCCCCCCCHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCHHHEEEECCCHHHH AETLADYAVELAKRHDFKYRILEKEEMEGLGMGALLAVNQGSTIPPKLIVLEYRGAEEAP HHHHHHHHHHHHHHCCCEEEEECHHHHCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCC IAVVGKGVTFDTGGYSIKPKDGIVGMKGDMGGAATVLGLFETLGLTRPKRNVIGIIGATD EEEEECCEEECCCCEEECCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCC NMISGDAFKPDDVITAMNGKTIEVLNTDAEGRLVLADAVTFAKTYEPKAIIDVATLTGGV CCCCCCCCCCCCEEEECCCCEEEEEECCCCCCEEEEEHHHHHHCCCCCCEEEEEECCCCE LVALGTDVTGCLTNDDTLYRSLEEASRETNELVWQMPYFDVFIDKVRKSEVADLNNSPGR EEEECCCCEEEECCCHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHCCCCCCCC FGHMIFGGAFVGEFVGDTPWLHLDIAGTSERAAANDLGPKGPTGVMVRTLARMIESWER EEHHEECHHHHHHHHCCCCEEEEEECCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MYQIAQLNWTDTYETIVVGVGAADSIDEGLDTLFGGRVKALIQSGDLSTKTGEVTILPTF CCEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHCCCEEEHEECCCCCCCCCCEEEEEEC TGETARVLFVGLGQRNDMTTENVRNWFGKVSKLIKSRGLKDVAVALDTFTDGAARIFTEA CCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEHHCCCCHHHHHHHH YEMATYAHPTYKSAPKEAVEEPTITLLGDVDQTDIDAGAAYGKGVNVARTLTMMPANILT HHHHHHCCCCCCCCCHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCHHHEEEECCCHHHH AETLADYAVELAKRHDFKYRILEKEEMEGLGMGALLAVNQGSTIPPKLIVLEYRGAEEAP HHHHHHHHHHHHHHCCCEEEEECHHHHCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCC IAVVGKGVTFDTGGYSIKPKDGIVGMKGDMGGAATVLGLFETLGLTRPKRNVIGIIGATD EEEEECCEEECCCCEEECCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCC NMISGDAFKPDDVITAMNGKTIEVLNTDAEGRLVLADAVTFAKTYEPKAIIDVATLTGGV CCCCCCCCCCCCEEEECCCCEEEEEECCCCCCEEEEEHHHHHHCCCCCCEEEEEECCCCE LVALGTDVTGCLTNDDTLYRSLEEASRETNELVWQMPYFDVFIDKVRKSEVADLNNSPGR EEEECCCCEEEECCCHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHCCCCCCCC FGHMIFGGAFVGEFVGDTPWLHLDIAGTSERAAANDLGPKGPTGVMVRTLARMIESWER EEHHEECHHHHHHHHCCCCEEEEEECCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA