| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229916463
Identifier: 229916463
GI number: 229916463
Start: 685347
End: 686480
Strand: Reverse
Name: 229916463
Synonym: EAT1b_0733
Alternate gene names: NA
Gene position: 686480-685347 (Counterclockwise)
Preceding gene: 229916464
Following gene: 229916462
Centisome position: 22.88
GC content: 48.5
Gene sequence:
>1134_bases ATGTCCATGAAACGTTCTTATGTGCTATACACGACACTATGTGCCGTCGTGGTCGGTGTGATCCTTTGTTATGTTTTTGT CTTTTCAGATGAAGAGATTCAACGACAGGTCGCCTCGACATTTGAAAAAATTGATATTCAAACGAGTCATCAAACAGCAT CCCTTCCACCCGTGGAAGCGGCGCAGGATGATGAAGATATCGATACGACCGATGCCCTCGAACAAATCAGTCAAATCGAT GAAGTGTACTACAGTGACACGATCGGGGCATATTTGGTCTTAACCGAACAAGCTGAATTTTTTGAGGTGAGTGGAAACGG AACGCGCGTCAACTCGGTGCTTCAACTGGAGAATTCAGGGAAACAGCGCCTCGATGATTTTATCGGAATGCGCATGGTCG AAGAAGATCTTGTGTATGCAGTGACAGCGAATGGAACTCTCGTCACAATCGAACGAGAAGAAGGACGCTGGGTCGAGAGA CCACGTAAACAAATCAAAGGACTCGTGTCGGAAGACCGAATCTTTGGTCTTGGTTATGACCGGGAAACGAAACGTCTGTT CATGATGAACCGATTGGCGGATACCCCGGACCTTGAGCTCCTTTATATCGAAGAACGGGAGATCGAACCGGAGACTCCAG CCGATGACAAATCATCAGAAGCGTCAACTGATGCTGACACGGCTACTCCAAAAACAGAAGAATCATCAGAAGACACAACG ACAGAGAACGTCTCGACGAATGACGACGCCTCGAGCGAATCGGCTGTATCTGAAGACGCGCCTGACAATGAGTCGAACGA ACAAGAAGCGGAAGAAGAGAAACAAGAGCCCGAGACCGAATGGATGCTCGATTCGCGTCAAGCGTTATCGGCTGACGGGA TGAGCGCCTCAATCCAGCAAAAGTTTGAGCGATTCGAAGGCGTCGGGCTTGTCGAACGACAAGGCCGGATTTACGTTCTC GACTCGGAAGAACTCGTCCTCTACACAGTGAACCCGGAAGAAAGTACCATCAACGGTCAGATGGTGACACCTCGCGTGTA TGACTCAACCGGCATGTTTTTACAAGACAATGAAATCTTTGCAATCGTCCACCCGGAAGTATTTGATTTGGATGCTTTCG TCTCTGTGGACTAA
Upstream 100 bases:
>100_bases TGTGACATTGTCGCACATTCTTTTCTTTTTGGTGAGGTCATTTTCTTTTTTGGACGGTTTTGATACACTAAAGGGCGATA CTGAAGTAGAAGGGGACGAC
Downstream 100 bases:
>100_bases CAATGGGGGAAAGACAGATGAGCAAGCGTTATTTTTTTGAAGAAGTGAAACAATTTCATGAAACTTTTGGACATCCAGGA GCAAAATCGCCGCAACCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 377; Mature: 376
Protein sequence:
>377_residues MSMKRSYVLYTTLCAVVVGVILCYVFVFSDEEIQRQVASTFEKIDIQTSHQTASLPPVEAAQDDEDIDTTDALEQISQID EVYYSDTIGAYLVLTEQAEFFEVSGNGTRVNSVLQLENSGKQRLDDFIGMRMVEEDLVYAVTANGTLVTIEREEGRWVER PRKQIKGLVSEDRIFGLGYDRETKRLFMMNRLADTPDLELLYIEEREIEPETPADDKSSEASTDADTATPKTEESSEDTT TENVSTNDDASSESAVSEDAPDNESNEQEAEEEKQEPETEWMLDSRQALSADGMSASIQQKFERFEGVGLVERQGRIYVL DSEELVLYTVNPEESTINGQMVTPRVYDSTGMFLQDNEIFAIVHPEVFDLDAFVSVD
Sequences:
>Translated_377_residues MSMKRSYVLYTTLCAVVVGVILCYVFVFSDEEIQRQVASTFEKIDIQTSHQTASLPPVEAAQDDEDIDTTDALEQISQID EVYYSDTIGAYLVLTEQAEFFEVSGNGTRVNSVLQLENSGKQRLDDFIGMRMVEEDLVYAVTANGTLVTIEREEGRWVER PRKQIKGLVSEDRIFGLGYDRETKRLFMMNRLADTPDLELLYIEEREIEPETPADDKSSEASTDADTATPKTEESSEDTT TENVSTNDDASSESAVSEDAPDNESNEQEAEEEKQEPETEWMLDSRQALSADGMSASIQQKFERFEGVGLVERQGRIYVL DSEELVLYTVNPEESTINGQMVTPRVYDSTGMFLQDNEIFAIVHPEVFDLDAFVSVD >Mature_376_residues SMKRSYVLYTTLCAVVVGVILCYVFVFSDEEIQRQVASTFEKIDIQTSHQTASLPPVEAAQDDEDIDTTDALEQISQIDE VYYSDTIGAYLVLTEQAEFFEVSGNGTRVNSVLQLENSGKQRLDDFIGMRMVEEDLVYAVTANGTLVTIEREEGRWVERP RKQIKGLVSEDRIFGLGYDRETKRLFMMNRLADTPDLELLYIEEREIEPETPADDKSSEASTDADTATPKTEESSEDTTT ENVSTNDDASSESAVSEDAPDNESNEQEAEEEKQEPETEWMLDSRQALSADGMSASIQQKFERFEGVGLVERQGRIYVLD SEELVLYTVNPEESTINGQMVTPRVYDSTGMFLQDNEIFAIVHPEVFDLDAFVSVD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42458; Mature: 42327
Theoretical pI: Translated: 3.80; Mature: 3.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMKRSYVLYTTLCAVVVGVILCYVFVFSDEEIQRQVASTFEKIDIQTSHQTASLPPVEA CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCEECCCCCCCCCCCC AQDDEDIDTTDALEQISQIDEVYYSDTIGAYLVLTEQAEFFEVSGNGTRVNSVLQLENSG CCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEECCCCCEEEEEEEECCCC KQRLDDFIGMRMVEEDLVYAVTANGTLVTIEREEGRWVERPRKQIKGLVSEDRIFGLGYD HHHHHHHHHHHHCCCCEEEEEECCCEEEEEECCCCCHHHHHHHHHHCCCCCCEEEECCCC RETKRLFMMNRLADTPDLELLYIEEREIEPETPADDKSSEASTDADTATPKTEESSEDTT CHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TENVSTNDDASSESAVSEDAPDNESNEQEAEEEKQEPETEWMLDSRQALSADGMSASIQQ CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHCCHHHHCCCCCCHHHHH KFERFEGVGLVERQGRIYVLDSEELVLYTVNPEESTINGQMVTPRVYDSTGMFLQDNEIF HHHHHCCCCEEECCCEEEEEECCCEEEEEECCCCCCCCCEEECCEEECCCCCEEECCCEE AIVHPEVFDLDAFVSVD EEECCCEECCEEEEECC >Mature Secondary Structure SMKRSYVLYTTLCAVVVGVILCYVFVFSDEEIQRQVASTFEKIDIQTSHQTASLPPVEA CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCEECCCCCCCCCCCC AQDDEDIDTTDALEQISQIDEVYYSDTIGAYLVLTEQAEFFEVSGNGTRVNSVLQLENSG CCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEECCCCCEEEEEEEECCCC KQRLDDFIGMRMVEEDLVYAVTANGTLVTIEREEGRWVERPRKQIKGLVSEDRIFGLGYD HHHHHHHHHHHHCCCCEEEEEECCCEEEEEECCCCCHHHHHHHHHHCCCCCCEEEECCCC RETKRLFMMNRLADTPDLELLYIEEREIEPETPADDKSSEASTDADTATPKTEESSEDTT CHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TENVSTNDDASSESAVSEDAPDNESNEQEAEEEKQEPETEWMLDSRQALSADGMSASIQQ CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHCCHHHHCCCCCCHHHHH KFERFEGVGLVERQGRIYVLDSEELVLYTVNPEESTINGQMVTPRVYDSTGMFLQDNEIF HHHHHCCCCEEECCCEEEEEECCCEEEEEECCCCCCCCCEEECCEEECCCCCEEECCCEE AIVHPEVFDLDAFVSVD EEECCCEECCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA