| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is leuS [H]
Identifier: 229916464
GI number: 229916464
Start: 686592
End: 688997
Strand: Reverse
Name: leuS [H]
Synonym: EAT1b_0734
Alternate gene names: 229916464
Gene position: 688997-686592 (Counterclockwise)
Preceding gene: 229916465
Following gene: 229916463
Centisome position: 22.97
GC content: 51.91
Gene sequence:
>2406_bases ATGTTGAGCTATTTTAAACATCAAGAAATCGAGCCGAAGTGGCAAAAGCGTTGGGAAGAGAAAGAAGCATTTAAAACGAC AGAAGACCCGGAAAAGGATTGTTTCTACGTCCTTGATATGTTCCCGTACCCATCCGGTGCAGGTCTTCACGTCGGTCACC CGGAAGGTTACACAGCGACGGATATCATCGCTCGTATGAAACGGATGCAAGGATATAACGTCCTTCACCCGATTGGCTGG GATGCGTTCGGTCTTCCTGCCGAGCAATATGCACTCGACACAGGGAACGACCCGCGTGAATTCACAGCGCGCAACATCGA GACGTTCCGCCGTCAGTTGAAAGAACTCGGATTCTCATACGATTGGGACCGTGAAATTAGCACGACGGACCCGAAATACT ATAAATGGACGCAGTGGATCTTCACGCAACTCTTCGAACGTGGTCTCGCATACGTCGATGAAGTCGCGGTCAACTGGTGC CCGGCTCTCGGTACAGTCCTTGCGAACGAGGAAGTCATCGATGGGTTGTCAGAGCGTGGGAACCACCCGGTCTACCGTGT CCCAATGAAGCAGTGGGTGCTTCGTATCACAGAATACGCAGAGCGTTTGCTTGAAGATTTGGAAGGTCTCGATTGGCCTG AGAGCGTGAAAGAGATGCAACGCAACTGGATTGGCAAATCAGTCGGTGCCGAGGTCGACTTTAAAGTCGATGGTCACGAT AAGATTGTCACGGTATTCACAACACGTCCAGATACGCTTCATGGGGCGACATACGTAACACTCGCACCAGAGCATCCGTT CACGAAAGTGATCACGACGCCTGAACAATCGACGGCAGTCGAAGCTTACATTGAAGAAGTCTCGAAGAAGACGGACCTTG AGCGTACAGATCTCGCCAAAGAGAAGACGGGTGTCTTCACGGGCGCATATGCGATCAACCCGGTGAACGGCGAGAAACTT CCGATTTGGACAGCGGACTACGTTCTCTCGACATATGGGACAGGTGCAGTCATGGCTGTTCCTGGACACGATGAGCGCGA TTATGAGTTTGCGAAAACGTTCGACCTCCCGATCCGTGAAGTCGTCAAAGGTGGAAACGTGGAAGAGGCGGCTTACGTCG AAGACGGAGAGCACGTCAACTCTGGTAGCTTGAACGGACTTAATAAAGCCGATGCCATCAAGACGATCATTGAAGAGCTC GAAGCGAGTGGCACAGGGCGTGCGAAGACGACATACCGTCTTCGTGACTGGTTGTTCAGCCGTCAACGTTACTGGGGCGA GCCGATTCCGGTCGTCCACATGGAAGACGGAACAATGAAGACGGTACCGGTCGAAGAGCTTCCGCTCGAACTTCCGATCA TCGATGAAATCAAACCATCTGGTACAGGTGAGTCGCCACTCGCGAACGCAGAAGAGTGGTTGACGTACACAGATCCGGTC ACGGGGGAAAAAGGTCGTCGCGAGACGAACACGATGCCACAATGGGCAGGTAGCTGCTGGTACTACATCCGTTACATCGA TCCAGATAACGAAGAGATGATCGCGGATCCTGAGAAACTCAAGCGTTGGCTTCCAGTCGACTTGTATATCGGGGGTACGG AGCATGCCGTTCTTCACTTGCTCTACGCACGTTTCTGGCATAAAGTCCTCTTTGATATCGGTGTCGTCCCGACGAGCGAA CCGTTCCAAAAACTCTACAACCAAGGAATGATCCTCGGTGAGAACAACGAGAAGATGTCGAAATCTCGTGGGAACGTTGT CAACCCGGATGATATCGTGAAGTCGCACGGAGCCGATACACTCCGTCTTTACGAAATGTTCATGGGACCACTTGATGCGG CCATCGCATGGTCGACGAATGGTCTTGACGGGGCACGTCGCTTCCTCGACCGCGTCTGGCGTTTGTTCGATCAGACGAAC TTCGCAGACGTGGCACCGACTGCCGACTTTGAACGTACGTATCATCAGACGGTGAAAAAAGTCACGGAGGATTATGAAGC CCTTCGCTTCAACACGGCAATCTCGCAGTTGATGGTCTTCGTCAATGAAGCGAACAAACAAGAGACGTTGCCGAAATCGC AAATGGTCGACTTCATCAAGATGCTTTCACCGGTCGCGCCACACTTGTCTGAAGAGTTGTGGGAGAAGATGGGCATGACG GAAGAGTTGACGTATGCGGCTTGGCCGACATACGATGAGTCAAAACTTGTGAGCGACACGATTGAAGTCGTCATCCAGGT GAACGGGAAACTCCGTGCGAAAATGCACGTCTCTCGTGACGCATCAAAAGAAGCACTTGAAGCGGAAGCACTCGGGAACG AGCGTGTCCAAGAGTTCACAGAAGGCAAGACGGTTCGTAAAGTCATTGTCGTTCCTGGAAAACTCGTCAATATTGTAGTG GGGTAA
Upstream 100 bases:
>100_bases AAGTGGCAGCAATGCAACATGGGTGGTACCGCGGAGAGCTTTCAAGCCTTTCGTCCCATTTTCGGGGACGGAAGGCTTTT TATTATGCAGAGGAGGAAGA
Downstream 100 bases:
>100_bases CAAAAAGAATGTGTGACATTGTCGCACATTCTTTTCTTTTTGGTGAGGTCATTTTCTTTTTTGGACGGTTTTGATACACT AAAGGGCGATACTGAAGTAG
Product: leucyl-tRNA synthetase
Products: NA
Alternate protein names: Leucine--tRNA ligase; LeuRS [H]
Number of amino acids: Translated: 801; Mature: 801
Protein sequence:
>801_residues MLSYFKHQEIEPKWQKRWEEKEAFKTTEDPEKDCFYVLDMFPYPSGAGLHVGHPEGYTATDIIARMKRMQGYNVLHPIGW DAFGLPAEQYALDTGNDPREFTARNIETFRRQLKELGFSYDWDREISTTDPKYYKWTQWIFTQLFERGLAYVDEVAVNWC PALGTVLANEEVIDGLSERGNHPVYRVPMKQWVLRITEYAERLLEDLEGLDWPESVKEMQRNWIGKSVGAEVDFKVDGHD KIVTVFTTRPDTLHGATYVTLAPEHPFTKVITTPEQSTAVEAYIEEVSKKTDLERTDLAKEKTGVFTGAYAINPVNGEKL PIWTADYVLSTYGTGAVMAVPGHDERDYEFAKTFDLPIREVVKGGNVEEAAYVEDGEHVNSGSLNGLNKADAIKTIIEEL EASGTGRAKTTYRLRDWLFSRQRYWGEPIPVVHMEDGTMKTVPVEELPLELPIIDEIKPSGTGESPLANAEEWLTYTDPV TGEKGRRETNTMPQWAGSCWYYIRYIDPDNEEMIADPEKLKRWLPVDLYIGGTEHAVLHLLYARFWHKVLFDIGVVPTSE PFQKLYNQGMILGENNEKMSKSRGNVVNPDDIVKSHGADTLRLYEMFMGPLDAAIAWSTNGLDGARRFLDRVWRLFDQTN FADVAPTADFERTYHQTVKKVTEDYEALRFNTAISQLMVFVNEANKQETLPKSQMVDFIKMLSPVAPHLSEELWEKMGMT EELTYAAWPTYDESKLVSDTIEVVIQVNGKLRAKMHVSRDASKEALEAEALGNERVQEFTEGKTVRKVIVVPGKLVNIVV G
Sequences:
>Translated_801_residues MLSYFKHQEIEPKWQKRWEEKEAFKTTEDPEKDCFYVLDMFPYPSGAGLHVGHPEGYTATDIIARMKRMQGYNVLHPIGW DAFGLPAEQYALDTGNDPREFTARNIETFRRQLKELGFSYDWDREISTTDPKYYKWTQWIFTQLFERGLAYVDEVAVNWC PALGTVLANEEVIDGLSERGNHPVYRVPMKQWVLRITEYAERLLEDLEGLDWPESVKEMQRNWIGKSVGAEVDFKVDGHD KIVTVFTTRPDTLHGATYVTLAPEHPFTKVITTPEQSTAVEAYIEEVSKKTDLERTDLAKEKTGVFTGAYAINPVNGEKL PIWTADYVLSTYGTGAVMAVPGHDERDYEFAKTFDLPIREVVKGGNVEEAAYVEDGEHVNSGSLNGLNKADAIKTIIEEL EASGTGRAKTTYRLRDWLFSRQRYWGEPIPVVHMEDGTMKTVPVEELPLELPIIDEIKPSGTGESPLANAEEWLTYTDPV TGEKGRRETNTMPQWAGSCWYYIRYIDPDNEEMIADPEKLKRWLPVDLYIGGTEHAVLHLLYARFWHKVLFDIGVVPTSE PFQKLYNQGMILGENNEKMSKSRGNVVNPDDIVKSHGADTLRLYEMFMGPLDAAIAWSTNGLDGARRFLDRVWRLFDQTN FADVAPTADFERTYHQTVKKVTEDYEALRFNTAISQLMVFVNEANKQETLPKSQMVDFIKMLSPVAPHLSEELWEKMGMT EELTYAAWPTYDESKLVSDTIEVVIQVNGKLRAKMHVSRDASKEALEAEALGNERVQEFTEGKTVRKVIVVPGKLVNIVV G >Mature_801_residues MLSYFKHQEIEPKWQKRWEEKEAFKTTEDPEKDCFYVLDMFPYPSGAGLHVGHPEGYTATDIIARMKRMQGYNVLHPIGW DAFGLPAEQYALDTGNDPREFTARNIETFRRQLKELGFSYDWDREISTTDPKYYKWTQWIFTQLFERGLAYVDEVAVNWC PALGTVLANEEVIDGLSERGNHPVYRVPMKQWVLRITEYAERLLEDLEGLDWPESVKEMQRNWIGKSVGAEVDFKVDGHD KIVTVFTTRPDTLHGATYVTLAPEHPFTKVITTPEQSTAVEAYIEEVSKKTDLERTDLAKEKTGVFTGAYAINPVNGEKL PIWTADYVLSTYGTGAVMAVPGHDERDYEFAKTFDLPIREVVKGGNVEEAAYVEDGEHVNSGSLNGLNKADAIKTIIEEL EASGTGRAKTTYRLRDWLFSRQRYWGEPIPVVHMEDGTMKTVPVEELPLELPIIDEIKPSGTGESPLANAEEWLTYTDPV TGEKGRRETNTMPQWAGSCWYYIRYIDPDNEEMIADPEKLKRWLPVDLYIGGTEHAVLHLLYARFWHKVLFDIGVVPTSE PFQKLYNQGMILGENNEKMSKSRGNVVNPDDIVKSHGADTLRLYEMFMGPLDAAIAWSTNGLDGARRFLDRVWRLFDQTN FADVAPTADFERTYHQTVKKVTEDYEALRFNTAISQLMVFVNEANKQETLPKSQMVDFIKMLSPVAPHLSEELWEKMGMT EELTYAAWPTYDESKLVSDTIEVVIQVNGKLRAKMHVSRDASKEALEAEALGNERVQEFTEGKTVRKVIVVPGKLVNIVV G
Specific function: Unknown
COG id: COG0495
COG function: function code J; Leucyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI7661872, Length=878, Percent_Identity=32.5740318906606, Blast_Score=445, Evalue=1e-125, Organism=Escherichia coli, GI1786861, Length=871, Percent_Identity=43.2835820895522, Blast_Score=693, Evalue=0.0, Organism=Escherichia coli, GI1790708, Length=394, Percent_Identity=27.1573604060914, Blast_Score=108, Evalue=2e-24, Organism=Caenorhabditis elegans, GI71997510, Length=774, Percent_Identity=29.8449612403101, Blast_Score=311, Evalue=8e-85, Organism=Caenorhabditis elegans, GI71997517, Length=774, Percent_Identity=29.8449612403101, Blast_Score=311, Evalue=9e-85, Organism=Caenorhabditis elegans, GI212645227, Length=321, Percent_Identity=28.3489096573209, Blast_Score=120, Evalue=2e-27, Organism=Caenorhabditis elegans, GI17510661, Length=886, Percent_Identity=21.3318284424379, Blast_Score=114, Evalue=3e-25, Organism=Saccharomyces cerevisiae, GI6323414, Length=874, Percent_Identity=34.5537757437071, Blast_Score=464, Evalue=1e-131, Organism=Saccharomyces cerevisiae, GI6319395, Length=188, Percent_Identity=28.7234042553192, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI21355409, Length=891, Percent_Identity=31.8742985409652, Blast_Score=382, Evalue=1e-106,
Paralogues:
None
Copy number: 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001412 - InterPro: IPR002300 - InterPro: IPR002302 - InterPro: IPR014729 - InterPro: IPR009080 - InterPro: IPR013155 - InterPro: IPR009008 [H]
Pfam domain/function: PF08264 Anticodon_1; PF00133 tRNA-synt_1 [H]
EC number: =6.1.1.4 [H]
Molecular weight: Translated: 91360; Mature: 91360
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSYFKHQEIEPKWQKRWEEKEAFKTTEDPEKDCFYVLDMFPYPSGAGLHVGHPEGYTAT CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCEECCCCCCCCHH DIIARMKRMQGYNVLHPIGWDAFGLPAEQYALDTGNDPREFTARNIETFRRQLKELGFSY HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC DWDREISTTDPKYYKWTQWIFTQLFERGLAYVDEVAVNWCPALGTVLANEEVIDGLSERG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC NHPVYRVPMKQWVLRITEYAERLLEDLEGLDWPESVKEMQRNWIGKSVGAEVDFKVDGHD CCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHCCCEEEEEECCCC KIVTVFTTRPDTLHGATYVTLAPEHPFTKVITTPEQSTAVEAYIEEVSKKTDLERTDLAK EEEEEEECCCCCCCCCEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHH EKTGVFTGAYAINPVNGEKLPIWTADYVLSTYGTGAVMAVPGHDERDYEFAKTFDLPIRE HHCCEEEEEEEECCCCCCCCEEEEHHHHHHHCCCCEEEEECCCCCCCCHHHHHCCCCHHH VVKGGNVEEAAYVEDGEHVNSGSLNGLNKADAIKTIIEELEASGTGRAKTTYRLRDWLFS HHCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH RQRYWGEPIPVVHMEDGTMKTVPVEELPLELPIIDEIKPSGTGESPLANAEEWLTYTDPV HHHHCCCCCCEEEECCCCEEECCHHHCCCCCCCHHCCCCCCCCCCCCCCHHHCEEECCCC TGEKGRRETNTMPQWAGSCWYYIRYIDPDNEEMIADPEKLKRWLPVDLYIGGTEHAVLHL CCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHCCEEEEECCCHHHHHHH LYARFWHKVLFDIGVVPTSEPFQKLYNQGMILGENNEKMSKSRGNVVNPDDIVKSHGADT HHHHHHHHHHHHHCCCCCCHHHHHHHHCCEEECCCCHHHHHCCCCCCCHHHHHHHCCCCH LRLYEMFMGPLDAAIAWSTNGLDGARRFLDRVWRLFDQTNFADVAPTADFERTYHQTVKK HHHHHHHHCCHHHEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH VTEDYEALRFNTAISQLMVFVNEANKQETLPKSQMVDFIKMLSPVAPHLSEELWEKMGMT HHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCC EELTYAAWPTYDESKLVSDTIEVVIQVNGKLRAKMHVSRDASKEALEAEALGNERVQEFT HHCEEEECCCCCCHHHHHHHHHEEEEECCCEEEEEEECCCCHHHHHHHHHCCHHHHHHHH EGKTVRKVIVVPGKLVNIVVG CCCCEEEEEEECCEEEEEEEC >Mature Secondary Structure MLSYFKHQEIEPKWQKRWEEKEAFKTTEDPEKDCFYVLDMFPYPSGAGLHVGHPEGYTAT CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCEECCCCCCCCHH DIIARMKRMQGYNVLHPIGWDAFGLPAEQYALDTGNDPREFTARNIETFRRQLKELGFSY HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC DWDREISTTDPKYYKWTQWIFTQLFERGLAYVDEVAVNWCPALGTVLANEEVIDGLSERG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC NHPVYRVPMKQWVLRITEYAERLLEDLEGLDWPESVKEMQRNWIGKSVGAEVDFKVDGHD CCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHCCCEEEEEECCCC KIVTVFTTRPDTLHGATYVTLAPEHPFTKVITTPEQSTAVEAYIEEVSKKTDLERTDLAK EEEEEEECCCCCCCCCEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHH EKTGVFTGAYAINPVNGEKLPIWTADYVLSTYGTGAVMAVPGHDERDYEFAKTFDLPIRE HHCCEEEEEEEECCCCCCCCEEEEHHHHHHHCCCCEEEEECCCCCCCCHHHHHCCCCHHH VVKGGNVEEAAYVEDGEHVNSGSLNGLNKADAIKTIIEELEASGTGRAKTTYRLRDWLFS HHCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH RQRYWGEPIPVVHMEDGTMKTVPVEELPLELPIIDEIKPSGTGESPLANAEEWLTYTDPV HHHHCCCCCCEEEECCCCEEECCHHHCCCCCCCHHCCCCCCCCCCCCCCHHHCEEECCCC TGEKGRRETNTMPQWAGSCWYYIRYIDPDNEEMIADPEKLKRWLPVDLYIGGTEHAVLHL CCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHCCEEEEECCCHHHHHHH LYARFWHKVLFDIGVVPTSEPFQKLYNQGMILGENNEKMSKSRGNVVNPDDIVKSHGADT HHHHHHHHHHHHHCCCCCCHHHHHHHHCCEEECCCCHHHHHCCCCCCCHHHHHHHCCCCH LRLYEMFMGPLDAAIAWSTNGLDGARRFLDRVWRLFDQTNFADVAPTADFERTYHQTVKK HHHHHHHHCCHHHEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH VTEDYEALRFNTAISQLMVFVNEANKQETLPKSQMVDFIKMLSPVAPHLSEELWEKMGMT HHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCC EELTYAAWPTYDESKLVSDTIEVVIQVNGKLRAKMHVSRDASKEALEAEALGNERVQEFT HHCEEEECCCCCCHHHHHHHHHEEEEECCCEEEEEEECCCCHHHHHHHHHCCHHHHHHHH EGKTVRKVIVVPGKLVNIVVG CCCCEEEEEEECCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA