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The map label for this gene is ytmP [H]

Identifier: 229916450

GI number: 229916450

Start: 671393

End: 672187

Strand: Reverse

Name: ytmP [H]

Synonym: EAT1b_0720

Alternate gene names: 229916450

Gene position: 672187-671393 (Counterclockwise)

Preceding gene: 229916451

Following gene: 229916448

Centisome position: 22.41

GC content: 48.05

Gene sequence:

>795_bases
ATGTATTCAGATATAGTCGGTGCGCTCGGGAAAGAGTGGACAGTCGCTTCAGCCGGAGGCATCACGGGCGAAGCGTATGT
AGCGACGACGCGCCAACAGAAGATTTTTGTCAAACGAAATTCTTCTCCGTTTCTGGCGATCTTGTCAGCGGAAGGAATCG
TACCAAAGCTTCTTTGGACAAAGCGAATGTTTAACGGGGACGTGTTAAGCGCCCAACAATTTATCGAAGGCCGCGAACTT
TCACCAGAAGATATGAAGCGACCTGATGTCGCGGCGCAACTCGGCAAGATTCATAATTCGAAAGAGCTATTATTCATGTT
GCAACAGCTGAACCACACACCGGTGACGCCGCACTTGTTGCTCCGTCAGTGTGAAGCATATGAACAAGATGAAACAGACC
CAATCATCGGAGAAGCCGTACAATGGCTAAAGCACCATTTGCCAAAAGTCGACGAGCAAGAATTTGTCGTCTGTCATTCT
GACTTAAACCATAATAATTGGATTGAGGATGAGAGCGGCCTACTCTACTTGACGGATTGGGATGACGCGATCATTGCAGA
CCGCGCGTTCGATTTGGCGATGGTTGTCTATAGCTATATGGATGAAGTGGAGTGGGAGCGCTGGTTCTCTCATTACGGGG
TACGTGTCTCGAGTGAGCTCCATAATCGAATGCATTGGTATGCAATCGCCCAGACGATTTTGACAATCTATGGGGAAGAG
AATGACTCGGCGCGAACTGAAGGATTTCATGTATTACGTGAGCTGATGGATGAGGCGTACGAACGAATCAATTAA

Upstream 100 bases:

>100_bases
CCGGCACACATTCAAGTCGAGTCGTTGTCAATGACGATTCTCGCGTGTTAAGATGTTGATTGTATCTCTTTAATTCAAGT
AAGATTTGAGCGTGATGAAT

Downstream 100 bases:

>100_bases
AAGGGATGGCTGTTCGCCACCCCTTTTTGAATGTGTTAAATGTCGTCTGGATTCATAAAGTAAGCCCAAACGAACGTTGC
GATGACACCAGCAAAAAACG

Product: aminoglycoside phosphotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MYSDIVGALGKEWTVASAGGITGEAYVATTRQQKIFVKRNSSPFLAILSAEGIVPKLLWTKRMFNGDVLSAQQFIEGREL
SPEDMKRPDVAAQLGKIHNSKELLFMLQQLNHTPVTPHLLLRQCEAYEQDETDPIIGEAVQWLKHHLPKVDEQEFVVCHS
DLNHNNWIEDESGLLYLTDWDDAIIADRAFDLAMVVYSYMDEVEWERWFSHYGVRVSSELHNRMHWYAIAQTILTIYGEE
NDSARTEGFHVLRELMDEAYERIN

Sequences:

>Translated_264_residues
MYSDIVGALGKEWTVASAGGITGEAYVATTRQQKIFVKRNSSPFLAILSAEGIVPKLLWTKRMFNGDVLSAQQFIEGREL
SPEDMKRPDVAAQLGKIHNSKELLFMLQQLNHTPVTPHLLLRQCEAYEQDETDPIIGEAVQWLKHHLPKVDEQEFVVCHS
DLNHNNWIEDESGLLYLTDWDDAIIADRAFDLAMVVYSYMDEVEWERWFSHYGVRVSSELHNRMHWYAIAQTILTIYGEE
NDSARTEGFHVLRELMDEAYERIN
>Mature_264_residues
MYSDIVGALGKEWTVASAGGITGEAYVATTRQQKIFVKRNSSPFLAILSAEGIVPKLLWTKRMFNGDVLSAQQFIEGREL
SPEDMKRPDVAAQLGKIHNSKELLFMLQQLNHTPVTPHLLLRQCEAYEQDETDPIIGEAVQWLKHHLPKVDEQEFVVCHS
DLNHNNWIEDESGLLYLTDWDDAIIADRAFDLAMVVYSYMDEVEWERWFSHYGVRVSSELHNRMHWYAIAQTILTIYGEE
NDSARTEGFHVLRELMDEAYERIN

Specific function: Unknown

COG id: COG0510

COG function: function code M; Predicted choline kinase involved in LPS biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aminoglycoside phosphotransferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002575
- InterPro:   IPR011009 [H]

Pfam domain/function: PF01636 APH [H]

EC number: NA

Molecular weight: Translated: 30458; Mature: 30458

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSDIVGALGKEWTVASAGGITGEAYVATTRQQKIFVKRNSSPFLAILSAEGIVPKLLWT
CCHHHHHHCCCCEEEECCCCCCCCEEEEECCCEEEEEEECCCCEEEEEECCCCHHHHHHH
KRMFNGDVLSAQQFIEGRELSPEDMKRPDVAAQLGKIHNSKELLFMLQQLNHTPVTPHLL
HHHCCCCHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHH
LRQCEAYEQDETDPIIGEAVQWLKHHLPKVDEQEFVVCHSDLNHNNWIEDESGLLYLTDW
HHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEECC
DDAIIADRAFDLAMVVYSYMDEVEWERWFSHYGVRVSSELHNRMHWYAIAQTILTIYGEE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHCCC
NDSARTEGFHVLRELMDEAYERIN
CCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MYSDIVGALGKEWTVASAGGITGEAYVATTRQQKIFVKRNSSPFLAILSAEGIVPKLLWT
CCHHHHHHCCCCEEEECCCCCCCCEEEEECCCEEEEEEECCCCEEEEEECCCCHHHHHHH
KRMFNGDVLSAQQFIEGRELSPEDMKRPDVAAQLGKIHNSKELLFMLQQLNHTPVTPHLL
HHHCCCCHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHH
LRQCEAYEQDETDPIIGEAVQWLKHHLPKVDEQEFVVCHSDLNHNNWIEDESGLLYLTDW
HHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEECC
DDAIIADRAFDLAMVVYSYMDEVEWERWFSHYGVRVSSELHNRMHWYAIAQTILTIYGEE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHCCC
NDSARTEGFHVLRELMDEAYERIN
CCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]