| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is ytxK [H]
Identifier: 229916415
GI number: 229916415
Start: 638641
End: 639534
Strand: Reverse
Name: ytxK [H]
Synonym: EAT1b_0685
Alternate gene names: 229916415
Gene position: 639534-638641 (Counterclockwise)
Preceding gene: 229916416
Following gene: 229916414
Centisome position: 21.32
GC content: 45.53
Gene sequence:
>894_bases ATGGAACGTTTTGAACAACTCTATCGTGATTGGAAAAAGGAAGCGAAGAAACTAGTCAACGACCTGGATGTATTACCGAT CGAGGCACTCGTCCAAGTATTTGACCATGTTGACATTGAAAAAGAGAAGATGGACGATGTCCGTAAAGCTGTGAGTTTAC TCGTCTTGGAAGAAACGACACAACTCCCTCCGAACAATCAACCGACACCGGATGCGGTCAGCCTATTTATGGGTTATCTA GCTACGAAGCTGCTTAAGGAAAATGCGACGATTCTAGACTTAGGTAGTGGGACAGGTACGTTGACGCATGCCATTCTTTC TCAGTTAAAAGATGCTACAGCACAGGCGGTCGAAGTAGACGAACTGTTGCTTCGTCTTTCCTACTCCATGAGTAACTTGT TAGGAGAACCGGTATCCTACTTCCATCAAGACGCACTTGCTCCTCTGTTTGTTGAACCGAGCGACCTTTCCGTTGCTGAC TTGCCGATCGGCTATTATCCAAATGATGAAGTGGCAGCCAGTTACGATATGAAACGAGAAGAAGGACATGCCTATTCGCA TTTCCTCTTGATGGAACAGGCGATTCGCCATACGAAACCAGGTGGGCATGGATTATTTGTCATCCCGAACAATTTGTTTG AACAGGATGACGAAGGGAAATTAAAACAATGGATGGACCGTGAGGCTGTTGTGAAAGGGGTCATTCAACTTCCGACGACG ATGTTCAAAGACGAGCGTTACGCGAAAAGCTTATTGCTTCTTCAAAAAGTAGGAGAAGGCGTCACACGACCGAAACAAGC GCTATTCGTGGAACTTCCGTCATTCACTGATGTGAGAGCGGTAGCCAATGTCGTGAAACAGATTGACGAGTGGTTCAAAA CAACTCAAAAATAA
Upstream 100 bases:
>100_bases TTGATTCGTTTGGCGAAATTGATTAAAATAGCTTACACTAGTACGTGAACCGACCGGTCCTCTCATGGGGGCCGGTTTTG TATGGAAAGGATGAACGAAA
Downstream 100 bases:
>100_bases TGGACAAAATACTTGAAAAAGGTATGCAAAATCAAGTATCTTCATTATGATACAGTTATCAGTTTTAAATTGAACAGATA AAGATATGCGTTTAAAACGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MERFEQLYRDWKKEAKKLVNDLDVLPIEALVQVFDHVDIEKEKMDDVRKAVSLLVLEETTQLPPNNQPTPDAVSLFMGYL ATKLLKENATILDLGSGTGTLTHAILSQLKDATAQAVEVDELLLRLSYSMSNLLGEPVSYFHQDALAPLFVEPSDLSVAD LPIGYYPNDEVAASYDMKREEGHAYSHFLLMEQAIRHTKPGGHGLFVIPNNLFEQDDEGKLKQWMDREAVVKGVIQLPTT MFKDERYAKSLLLLQKVGEGVTRPKQALFVELPSFTDVRAVANVVKQIDEWFKTTQK
Sequences:
>Translated_297_residues MERFEQLYRDWKKEAKKLVNDLDVLPIEALVQVFDHVDIEKEKMDDVRKAVSLLVLEETTQLPPNNQPTPDAVSLFMGYL ATKLLKENATILDLGSGTGTLTHAILSQLKDATAQAVEVDELLLRLSYSMSNLLGEPVSYFHQDALAPLFVEPSDLSVAD LPIGYYPNDEVAASYDMKREEGHAYSHFLLMEQAIRHTKPGGHGLFVIPNNLFEQDDEGKLKQWMDREAVVKGVIQLPTT MFKDERYAKSLLLLQKVGEGVTRPKQALFVELPSFTDVRAVANVVKQIDEWFKTTQK >Mature_297_residues MERFEQLYRDWKKEAKKLVNDLDVLPIEALVQVFDHVDIEKEKMDDVRKAVSLLVLEETTQLPPNNQPTPDAVSLFMGYL ATKLLKENATILDLGSGTGTLTHAILSQLKDATAQAVEVDELLLRLSYSMSNLLGEPVSYFHQDALAPLFVEPSDLSVAD LPIGYYPNDEVAASYDMKREEGHAYSHFLLMEQAIRHTKPGGHGLFVIPNNLFEQDDEGKLKQWMDREAVVKGVIQLPTT MFKDERYAKSLLLLQKVGEGVTRPKQALFVELPSFTDVRAVANVVKQIDEWFKTTQK
Specific function: Unknown
COG id: COG0827
COG function: function code L; Adenine-specific DNA methylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To type I restriction system adenine methylases [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003356 - InterPro: IPR002296 - InterPro: IPR016843 [H]
Pfam domain/function: PF02384 N6_Mtase [H]
EC number: NA
Molecular weight: Translated: 33561; Mature: 33561
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERFEQLYRDWKKEAKKLVNDLDVLPIEALVQVFDHVDIEKEKMDDVRKAVSLLVLEETT CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH QLPPNNQPTPDAVSLFMGYLATKLLKENATILDLGSGTGTLTHAILSQLKDATAQAVEVD CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHH ELLLRLSYSMSNLLGEPVSYFHQDALAPLFVEPSDLSVADLPIGYYPNDEVAASYDMKRE HHHHHHHHHHHHHHCHHHHHHHHHCCCCEEECCCCCCEECCCCCCCCCCCHHHHCCCHHH EGHAYSHFLLMEQAIRHTKPGGHGLFVIPNNLFEQDDEGKLKQWMDREAVVKGVIQLPTT CCCHHHHHHHHHHHHHHCCCCCCEEEEECCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH MFKDERYAKSLLLLQKVGEGVTRPKQALFVELPSFTDVRAVANVVKQIDEWFKTTQK HHHHHHHHHHHHHHHHHCCCCCCCCHHHEEECCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MERFEQLYRDWKKEAKKLVNDLDVLPIEALVQVFDHVDIEKEKMDDVRKAVSLLVLEETT CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH QLPPNNQPTPDAVSLFMGYLATKLLKENATILDLGSGTGTLTHAILSQLKDATAQAVEVD CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHH ELLLRLSYSMSNLLGEPVSYFHQDALAPLFVEPSDLSVADLPIGYYPNDEVAASYDMKRE HHHHHHHHHHHHHHCHHHHHHHHHCCCCEEECCCCCCEECCCCCCCCCCCHHHHCCCHHH EGHAYSHFLLMEQAIRHTKPGGHGLFVIPNNLFEQDDEGKLKQWMDREAVVKGVIQLPTT CCCHHHHHHHHHHHHHHCCCCCCEEEEECCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH MFKDERYAKSLLLLQKVGEGVTRPKQALFVELPSFTDVRAVANVVKQIDEWFKTTQK HHHHHHHHHHHHHHHHHCCCCCCCCHHHEEECCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377; 8226682 [H]