| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is pfkA [H]
Identifier: 229916400
GI number: 229916400
Start: 623098
End: 624066
Strand: Reverse
Name: pfkA [H]
Synonym: EAT1b_0670
Alternate gene names: 229916400
Gene position: 624066-623098 (Counterclockwise)
Preceding gene: 229916401
Following gene: 229916399
Centisome position: 20.8
GC content: 49.54
Gene sequence:
>969_bases GTGAATTTAAAACGTATTGCGGTATTAACAAGCGGAGGAGACGCTCCTGGAATGAACGCTGCTGTCCGTGCCGTGACCCG AAAAGCAATTTTTGAAGGTCTTGAAGTGTACGGCGTGTATAACGGCTATCAAGGATTAATCGAAGGTGATTTAGTCGAAT TAAATCTTGGATCAGTCGGCGATATCATTCAACGTGGAGGTACGTTCCTTCGCTCTGCGCGCTGTCCTGAATTCAGAACA GAAGAAGGTCGCGCGAAAGCAGTAGAACAGTTGAAGAAGTTCAATATCGATGCCCTCGTGGTCATTGGTGGAGATGGCTC TTATCGCGGAGCTCAAAAATTGACTGAACTCGGATTCCCAACAATCGGCCTTCCGGGTACAATCGATAACGATATCCCAG GAACAGATGCGACAATCGGTTTTGACACGGCGCTCAACACAGCGCTTGATGCGATCGATAAGATTCGTGATACGGCTTCA TCACATGAACGCACGTATGTCATCGAGGTCATGGGGCGCGACGCTGGTGATATCGCGCTTTATTCTGGTCTCGCTGGTGG TGCTGAGTCGATTCTCGTCCCAGAACGTCCAGAAGATTTGAATGCAATCGTGGAACGAATCAATCACGGGATTGCACGCG GTAAGAAGCACTCAATCGTCATCGTTGCTGAAGGTGCAGGAAGTGCGGAAGAAATCGGCAAATTGATTGCTGAGAAGACG AACTCAGAAACACGCGTCACGATTCTCGGTCACATCCAACGTGGTGGTTCCCCAACTGCCGCTGACCGTGTCCTTGCAAG TCGCATGGGTGCATACGCTGTTGAGATCTTGCTCGAAGGGAAGGCGGGCCGCGTTGTCGGAATCCGTAACAACCAAATGA TGGATCTCGATATCGATGAGGCGCTCGACAACAACAAGCACACGATTGATATGCAATTGATTGACCTCGTCAACCAGTTG TCGATTTAA
Upstream 100 bases:
>100_bases ATACCCTATGCATTTTTTTCACATACTTGTGTTGTAAAACAAAGGTCAGACGTGGTATTTTATTTTCAGATTTCGTTAAA ACACATAAGAGGTGAGCGAC
Downstream 100 bases:
>100_bases ACGATTTTGTATGTTGCAGAGACGGGATACGGTCTAAGGCCCCCCGTTTTCTGTTTGTAAATTGCACTATATCCCCTAGG AGGTTTTTATATTATGCGTA
Product: 6-phosphofructokinase
Products: NA
Alternate protein names: Phosphofructokinase; Phosphohexokinase [H]
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MNLKRIAVLTSGGDAPGMNAAVRAVTRKAIFEGLEVYGVYNGYQGLIEGDLVELNLGSVGDIIQRGGTFLRSARCPEFRT EEGRAKAVEQLKKFNIDALVVIGGDGSYRGAQKLTELGFPTIGLPGTIDNDIPGTDATIGFDTALNTALDAIDKIRDTAS SHERTYVIEVMGRDAGDIALYSGLAGGAESILVPERPEDLNAIVERINHGIARGKKHSIVIVAEGAGSAEEIGKLIAEKT NSETRVTILGHIQRGGSPTAADRVLASRMGAYAVEILLEGKAGRVVGIRNNQMMDLDIDEALDNNKHTIDMQLIDLVNQL SI
Sequences:
>Translated_322_residues MNLKRIAVLTSGGDAPGMNAAVRAVTRKAIFEGLEVYGVYNGYQGLIEGDLVELNLGSVGDIIQRGGTFLRSARCPEFRT EEGRAKAVEQLKKFNIDALVVIGGDGSYRGAQKLTELGFPTIGLPGTIDNDIPGTDATIGFDTALNTALDAIDKIRDTAS SHERTYVIEVMGRDAGDIALYSGLAGGAESILVPERPEDLNAIVERINHGIARGKKHSIVIVAEGAGSAEEIGKLIAEKT NSETRVTILGHIQRGGSPTAADRVLASRMGAYAVEILLEGKAGRVVGIRNNQMMDLDIDEALDNNKHTIDMQLIDLVNQL SI >Mature_322_residues MNLKRIAVLTSGGDAPGMNAAVRAVTRKAIFEGLEVYGVYNGYQGLIEGDLVELNLGSVGDIIQRGGTFLRSARCPEFRT EEGRAKAVEQLKKFNIDALVVIGGDGSYRGAQKLTELGFPTIGLPGTIDNDIPGTDATIGFDTALNTALDAIDKIRDTAS SHERTYVIEVMGRDAGDIALYSGLAGGAESILVPERPEDLNAIVERINHGIARGKKHSIVIVAEGAGSAEEIGKLIAEKT NSETRVTILGHIQRGGSPTAADRVLASRMGAYAVEILLEGKAGRVVGIRNNQMMDLDIDEALDNNKHTIDMQLIDLVNQL SI
Specific function: Key control step of glycolysis. [C]
COG id: COG0205
COG function: function code G; 6-phosphofructokinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphofructokinase family [H]
Homologues:
Organism=Homo sapiens, GI48762920, Length=358, Percent_Identity=43.2960893854749, Blast_Score=250, Evalue=1e-66, Organism=Homo sapiens, GI266453619, Length=341, Percent_Identity=43.9882697947214, Blast_Score=248, Evalue=7e-66, Organism=Homo sapiens, GI11321601, Length=349, Percent_Identity=43.8395415472779, Blast_Score=247, Evalue=8e-66, Organism=Homo sapiens, GI266453768, Length=341, Percent_Identity=43.9882697947214, Blast_Score=247, Evalue=1e-65, Organism=Homo sapiens, GI266453748, Length=341, Percent_Identity=43.9882697947214, Blast_Score=247, Evalue=1e-65, Organism=Homo sapiens, GI4505749, Length=341, Percent_Identity=43.9882697947214, Blast_Score=247, Evalue=1e-65, Organism=Escherichia coli, GI1790350, Length=318, Percent_Identity=58.1761006289308, Blast_Score=367, Evalue=1e-103, Organism=Caenorhabditis elegans, GI25147584, Length=311, Percent_Identity=45.3376205787781, Blast_Score=239, Evalue=1e-63, Organism=Caenorhabditis elegans, GI17558788, Length=310, Percent_Identity=37.741935483871, Blast_Score=198, Evalue=4e-51, Organism=Caenorhabditis elegans, GI72003601, Length=289, Percent_Identity=34.6020761245675, Blast_Score=168, Evalue=4e-42, Organism=Saccharomyces cerevisiae, GI6323861, Length=315, Percent_Identity=40, Blast_Score=212, Evalue=6e-56, Organism=Saccharomyces cerevisiae, GI6321679, Length=346, Percent_Identity=39.0173410404624, Blast_Score=208, Evalue=9e-55, Organism=Drosophila melanogaster, GI17647809, Length=341, Percent_Identity=42.8152492668622, Blast_Score=244, Evalue=7e-65, Organism=Drosophila melanogaster, GI24652337, Length=341, Percent_Identity=42.8152492668622, Blast_Score=244, Evalue=7e-65, Organism=Drosophila melanogaster, GI28573326, Length=341, Percent_Identity=42.2287390029325, Blast_Score=243, Evalue=2e-64,
Paralogues:
None
Copy number: 3981 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 950 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012003 - InterPro: IPR012828 - InterPro: IPR022953 - InterPro: IPR015912 - InterPro: IPR000023 [H]
Pfam domain/function: PF00365 PFK [H]
EC number: =2.7.1.11 [H]
Molecular weight: Translated: 34292; Mature: 34292
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: PS00433 PHOSPHOFRUCTOKINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLKRIAVLTSGGDAPGMNAAVRAVTRKAIFEGLEVYGVYNGYQGLIEGDLVELNLGSVG CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCHHEEEEECCCCCCCCCCEEEEECCCHH DIIQRGGTFLRSARCPEFRTEEGRAKAVEQLKKFNIDALVVIGGDGSYRGAQKLTELGFP HHHHCCCHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCC TIGLPGTIDNDIPGTDATIGFDTALNTALDAIDKIRDTASSHERTYVIEVMGRDAGDIAL CCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEE YSGLAGGAESILVPERPEDLNAIVERINHGIARGKKHSIVIVAEGAGSAEEIGKLIAEKT ECCCCCCCCCEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHCC NSETRVTILGHIQRGGSPTAADRVLASRMGAYAVEILLEGKAGRVVGIRNNQMMDLDIDE CCCEEEEEEEEECCCCCCHHHHHHHHHHHHHEEEEEEEECCCCCEEEECCCEEEECCHHH ALDNNKHTIDMQLIDLVNQLSI HHCCCCEEEHHHHHHHHHHHCC >Mature Secondary Structure MNLKRIAVLTSGGDAPGMNAAVRAVTRKAIFEGLEVYGVYNGYQGLIEGDLVELNLGSVG CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCHHEEEEECCCCCCCCCCEEEEECCCHH DIIQRGGTFLRSARCPEFRTEEGRAKAVEQLKKFNIDALVVIGGDGSYRGAQKLTELGFP HHHHCCCHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCC TIGLPGTIDNDIPGTDATIGFDTALNTALDAIDKIRDTASSHERTYVIEVMGRDAGDIAL CCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEE YSGLAGGAESILVPERPEDLNAIVERINHGIARGKKHSIVIVAEGAGSAEEIGKLIAEKT ECCCCCCCCCEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHCC NSETRVTILGHIQRGGSPTAADRVLASRMGAYAVEILLEGKAGRVVGIRNNQMMDLDIDE CCCEEEEEEEEECCCCCCHHHHHHHHHHHHHEEEEEEEECCCCCEEEECCCEEEECCHHH ALDNNKHTIDMQLIDLVNQLSI HHCCCCEEEHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA