| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is pyk [H]
Identifier: 229916399
GI number: 229916399
Start: 621262
End: 623004
Strand: Reverse
Name: pyk [H]
Synonym: EAT1b_0669
Alternate gene names: 229916399
Gene position: 623004-621262 (Counterclockwise)
Preceding gene: 229916400
Following gene: 229916398
Centisome position: 20.77
GC content: 49.68
Gene sequence:
>1743_bases ATGCGTAGAACGAAAATTGTATGTACCATTGGACCGGCTTCTGAGAAGCGTCTTCCTGAGATGATTGAAGCTGGGATGAA CGTTGCCCGTCTCAACTTCTCACACGGTGACTATGAAGAGCACGGCGCTCGTATCCGTGACATCCGTGAAGCAGCGAAAG CAGCGGGTAAAGTTGTCACTGTTCTTCTCGACACAAAAGGTCCAGAAATCCGCACGCATACATTCGAAGACGGTAAGGCA CTTCTTGAAAAAGGAAAAGAAGTCACGATCGTCTCGACGGAAGAAATCGTCGGAACGAAAGATCGTTTCTCTGTGACTTA CGAAGGACTCTACGATGATGTGGAAGTCGGTTCACACATCATGCTCGACGACGGTCTCATCGGACTCCGTGTCGTTGAAA AACTTGATAACCGTGATCTCCGTTGCGTCATCGAAAACGAAGGGATCATCAAGACGAAGAAAGGTGTTAACTTGCCAAAC GTCAAGGTAAACCTTCCTGCCCTCACGGACAAAGATATCGCGGACATCGAGTTCGGGATCTCACAAGACATTGACGTGAT TGCAGCATCATTCGTACGTCGTGCATCTGACGTAGTTGAAATTCGTCAACTTCTCGAGAAGCACAACGCGTCTCACATCA AGATTTACCCGAAAATCGAGAACCAAGAAGGTGTCGATAACATCGAAGAAATCTTGGCAATCTCTGACGGTTTGATGGTA GCCCGTGGTGACCTCGGAATTGAAATCCCGACGGAAGAAGTGACACCAGTTCAAAAAGAACTCATCAAGAAGTGTAACGA CCTCGGGAAGCCGGTCATCACAGCAACGCAAATGCTTGATTCAATGCAACGTAACCCGCGTCCGACACGTGCGGAAGCAT CAGACGTAGCAAACGCAATCTTGGATGGAACAGACGCAGTCATGCTCTCTGGTGAAACAGCTGCAGGGGACTACCCAATC GAATCTGTTCAAATGCAAGCTGCAATCGCAGAGCGTACAGAACGCATGCTCGACTACAAAAACTTGTTGAAAGATCGTCA GAAGCGCAGTGAGCACACAGTGACGGATGCGATCTCACAAGCGGTTGCGCACACGGCAATCAACTTGAACGCCAAAGCAA TCTTGACACCGACACAATCAGGTTATACGGCTGCTCGTACAGCGAAGTATCGTCCTGAAGCGAACATCATCGCGGTGACA GAATCGGAGCGCGTTGCGCGTCAATTGAACCTCGTATGGGGCGTATATCCAATCGTTGCTGAAACAATGCCGAACAATAC GGATGAAATGTTGGTTCAAGCATCGGAAGCGGCACGTCACGCTGGATTCGTCACTGACGGTGACCTCGTTGTCATCTCAG CTGGTATTCCTGCAGCGACTGCTGGTACGACGAACATGATGAAAGTCCACATCGTTGGTCACGCTCTCGCAGACGGACGT GGAATCGGTGAGCGCGGTGTCGTTGGAGAAGTCGTTGTCGCAAAAAATGCGGATGAAGCAAACGCAAAAGCGAAAGACGG CATGATCCTTGTCGCACCATTCACAGATAAAGAAATGATGCCTGCGATTGAAAAAGCGGCTGGAATCATCACGGAAGACG GTGGATTGACGAGCCATGCTGGGATCGTTGGACCATCACTTCGCAAGCCGGTCATCGTAGGTGTTGACGCAGCGACAACA TCGCTTCGTGACGGTCAGATGATTTCAATCGACCCACTCACAGGTAAAATCTACAACGCATAA
Upstream 100 bases:
>100_bases GATTTAAACGATTTTGTATGTTGCAGAGACGGGATACGGTCTAAGGCCCCCCGTTTTCTGTTTGTAAATTGCACTATATC CCCTAGGAGGTTTTTATATT
Downstream 100 bases:
>100_bases TTGAACGACAATCGAACCGGCCTTCTACAAAGGTCGGTTCTTTTTCCGTTCGAAGAAAGGAATACGTATGAGTGCATATC TATTTTTATTGATGCTCGTC
Product: pyruvate kinase
Products: NA
Alternate protein names: PK [H]
Number of amino acids: Translated: 580; Mature: 580
Protein sequence:
>580_residues MRRTKIVCTIGPASEKRLPEMIEAGMNVARLNFSHGDYEEHGARIRDIREAAKAAGKVVTVLLDTKGPEIRTHTFEDGKA LLEKGKEVTIVSTEEIVGTKDRFSVTYEGLYDDVEVGSHIMLDDGLIGLRVVEKLDNRDLRCVIENEGIIKTKKGVNLPN VKVNLPALTDKDIADIEFGISQDIDVIAASFVRRASDVVEIRQLLEKHNASHIKIYPKIENQEGVDNIEEILAISDGLMV ARGDLGIEIPTEEVTPVQKELIKKCNDLGKPVITATQMLDSMQRNPRPTRAEASDVANAILDGTDAVMLSGETAAGDYPI ESVQMQAAIAERTERMLDYKNLLKDRQKRSEHTVTDAISQAVAHTAINLNAKAILTPTQSGYTAARTAKYRPEANIIAVT ESERVARQLNLVWGVYPIVAETMPNNTDEMLVQASEAARHAGFVTDGDLVVISAGIPAATAGTTNMMKVHIVGHALADGR GIGERGVVGEVVVAKNADEANAKAKDGMILVAPFTDKEMMPAIEKAAGIITEDGGLTSHAGIVGPSLRKPVIVGVDAATT SLRDGQMISIDPLTGKIYNA
Sequences:
>Translated_580_residues MRRTKIVCTIGPASEKRLPEMIEAGMNVARLNFSHGDYEEHGARIRDIREAAKAAGKVVTVLLDTKGPEIRTHTFEDGKA LLEKGKEVTIVSTEEIVGTKDRFSVTYEGLYDDVEVGSHIMLDDGLIGLRVVEKLDNRDLRCVIENEGIIKTKKGVNLPN VKVNLPALTDKDIADIEFGISQDIDVIAASFVRRASDVVEIRQLLEKHNASHIKIYPKIENQEGVDNIEEILAISDGLMV ARGDLGIEIPTEEVTPVQKELIKKCNDLGKPVITATQMLDSMQRNPRPTRAEASDVANAILDGTDAVMLSGETAAGDYPI ESVQMQAAIAERTERMLDYKNLLKDRQKRSEHTVTDAISQAVAHTAINLNAKAILTPTQSGYTAARTAKYRPEANIIAVT ESERVARQLNLVWGVYPIVAETMPNNTDEMLVQASEAARHAGFVTDGDLVVISAGIPAATAGTTNMMKVHIVGHALADGR GIGERGVVGEVVVAKNADEANAKAKDGMILVAPFTDKEMMPAIEKAAGIITEDGGLTSHAGIVGPSLRKPVIVGVDAATT SLRDGQMISIDPLTGKIYNA >Mature_580_residues MRRTKIVCTIGPASEKRLPEMIEAGMNVARLNFSHGDYEEHGARIRDIREAAKAAGKVVTVLLDTKGPEIRTHTFEDGKA LLEKGKEVTIVSTEEIVGTKDRFSVTYEGLYDDVEVGSHIMLDDGLIGLRVVEKLDNRDLRCVIENEGIIKTKKGVNLPN VKVNLPALTDKDIADIEFGISQDIDVIAASFVRRASDVVEIRQLLEKHNASHIKIYPKIENQEGVDNIEEILAISDGLMV ARGDLGIEIPTEEVTPVQKELIKKCNDLGKPVITATQMLDSMQRNPRPTRAEASDVANAILDGTDAVMLSGETAAGDYPI ESVQMQAAIAERTERMLDYKNLLKDRQKRSEHTVTDAISQAVAHTAINLNAKAILTPTQSGYTAARTAKYRPEANIIAVT ESERVARQLNLVWGVYPIVAETMPNNTDEMLVQASEAARHAGFVTDGDLVVISAGIPAATAGTTNMMKVHIVGHALADGR GIGERGVVGEVVVAKNADEANAKAKDGMILVAPFTDKEMMPAIEKAAGIITEDGGLTSHAGIVGPSLRKPVIVGVDAATT SLRDGQMISIDPLTGKIYNA
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the PEP- utilizing enzyme family [H]
Homologues:
Organism=Homo sapiens, GI33286422, Length=488, Percent_Identity=45.2868852459016, Blast_Score=388, Evalue=1e-108, Organism=Homo sapiens, GI33286420, Length=488, Percent_Identity=45.2868852459016, Blast_Score=388, Evalue=1e-108, Organism=Homo sapiens, GI10835121, Length=490, Percent_Identity=44.6938775510204, Blast_Score=383, Evalue=1e-106, Organism=Homo sapiens, GI33286418, Length=488, Percent_Identity=45.2868852459016, Blast_Score=382, Evalue=1e-106, Organism=Homo sapiens, GI32967597, Length=490, Percent_Identity=44.6938775510204, Blast_Score=382, Evalue=1e-106, Organism=Homo sapiens, GI310128732, Length=289, Percent_Identity=48.4429065743945, Blast_Score=238, Evalue=1e-62, Organism=Homo sapiens, GI310128730, Length=289, Percent_Identity=48.4429065743945, Blast_Score=238, Evalue=1e-62, Organism=Homo sapiens, GI310128736, Length=237, Percent_Identity=45.5696202531646, Blast_Score=180, Evalue=3e-45, Organism=Homo sapiens, GI310128734, Length=237, Percent_Identity=45.5696202531646, Blast_Score=180, Evalue=3e-45, Organism=Homo sapiens, GI310128738, Length=216, Percent_Identity=44.4444444444444, Blast_Score=159, Evalue=6e-39, Organism=Escherichia coli, GI1787965, Length=477, Percent_Identity=48.6373165618449, Blast_Score=439, Evalue=1e-124, Organism=Escherichia coli, GI1788160, Length=482, Percent_Identity=38.5892116182573, Blast_Score=281, Evalue=9e-77, Organism=Escherichia coli, GI1787994, Length=165, Percent_Identity=30.9090909090909, Blast_Score=67, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17544584, Length=486, Percent_Identity=46.5020576131687, Blast_Score=382, Evalue=1e-106, Organism=Caenorhabditis elegans, GI71984413, Length=489, Percent_Identity=43.1492842535787, Blast_Score=352, Evalue=4e-97, Organism=Caenorhabditis elegans, GI17506829, Length=489, Percent_Identity=43.1492842535787, Blast_Score=352, Evalue=4e-97, Organism=Caenorhabditis elegans, GI71984406, Length=489, Percent_Identity=43.1492842535787, Blast_Score=351, Evalue=5e-97, Organism=Caenorhabditis elegans, GI17506831, Length=489, Percent_Identity=42.7402862985685, Blast_Score=351, Evalue=5e-97, Organism=Saccharomyces cerevisiae, GI6324923, Length=492, Percent_Identity=41.6666666666667, Blast_Score=342, Evalue=9e-95, Organism=Saccharomyces cerevisiae, GI6319279, Length=487, Percent_Identity=41.8891170431211, Blast_Score=335, Evalue=9e-93, Organism=Drosophila melanogaster, GI24648964, Length=489, Percent_Identity=43.1492842535787, Blast_Score=361, Evalue=1e-100, Organism=Drosophila melanogaster, GI28571814, Length=489, Percent_Identity=43.1492842535787, Blast_Score=360, Evalue=1e-99, Organism=Drosophila melanogaster, GI24648966, Length=413, Percent_Identity=44.0677966101695, Blast_Score=317, Evalue=1e-86, Organism=Drosophila melanogaster, GI24581235, Length=486, Percent_Identity=34.5679012345679, Blast_Score=274, Evalue=1e-73, Organism=Drosophila melanogaster, GI24646914, Length=272, Percent_Identity=43.75, Blast_Score=206, Evalue=3e-53,
Paralogues:
None
Copy number: 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 124 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008279 - InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR018209 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 [H]
Pfam domain/function: PF00391 PEP-utilizers; PF00224 PK; PF02887 PK_C [H]
EC number: =2.7.1.40 [H]
Molecular weight: Translated: 62582; Mature: 62582
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRTKIVCTIGPASEKRLPEMIEAGMNVARLNFSHGDYEEHGARIRDIREAAKAAGKVVT CCCEEEEEEECCCCHHCCHHHHHCCCCEEEEECCCCCHHHHCHHHHHHHHHHHHCCEEEE VLLDTKGPEIRTHTFEDGKALLEKGKEVTIVSTEEIVGTKDRFSVTYEGLYDDVEVGSHI EEEECCCCCEEEEECCCCHHHHHCCCEEEEEEHHHHCCCCCCEEEEECCCCCCHHCCCEE MLDDGLIGLRVVEKLDNRDLRCVIENEGIIKTKKGVNLPNVKVNLPALTDKDIADIEFGI EECCCCHHHHHHHHHCCCCEEEEEECCCEEEECCCCCCCCEEEECCCCCCCCCHHEECCC SQDIDVIAASFVRRASDVVEIRQLLEKHNASHIKIYPKIENQEGVDNIEEILAISDGLMV CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHCCCEEE ARGDLGIEIPTEEVTPVQKELIKKCNDLGKPVITATQMLDSMQRNPRPTRAEASDVANAI EECCCCEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH LDGTDAVMLSGETAAGDYPIESVQMQAAIAERTERMLDYKNLLKDRQKRSEHTVTDAISQ HCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVAHTAINLNAKAILTPTQSGYTAARTAKYRPEANIIAVTESERVARQLNLVWGVYPIVA HHHHHHEECCCEEEEECCCCCCCHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHH ETMPNNTDEMLVQASEAARHAGFVTDGDLVVISAGIPAATAGTTNMMKVHIVGHALADGR HHCCCCHHHHHHHHHHHHHHCCCEECCCEEEEECCCCCCCCCCCCEEEEEEEEEEHHCCC GIGERGVVGEVVVAKNADEANAKAKDGMILVAPFTDKEMMPAIEKAAGIITEDGGLTSHA CCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCEEECCCCCCCCC GIVGPSLRKPVIVGVDAATTSLRDGQMISIDPLTGKIYNA CCCCCCCCCCEEEEECCHHCCCCCCCEEEEECCCCCEECC >Mature Secondary Structure MRRTKIVCTIGPASEKRLPEMIEAGMNVARLNFSHGDYEEHGARIRDIREAAKAAGKVVT CCCEEEEEEECCCCHHCCHHHHHCCCCEEEEECCCCCHHHHCHHHHHHHHHHHHCCEEEE VLLDTKGPEIRTHTFEDGKALLEKGKEVTIVSTEEIVGTKDRFSVTYEGLYDDVEVGSHI EEEECCCCCEEEEECCCCHHHHHCCCEEEEEEHHHHCCCCCCEEEEECCCCCCHHCCCEE MLDDGLIGLRVVEKLDNRDLRCVIENEGIIKTKKGVNLPNVKVNLPALTDKDIADIEFGI EECCCCHHHHHHHHHCCCCEEEEEECCCEEEECCCCCCCCEEEECCCCCCCCCHHEECCC SQDIDVIAASFVRRASDVVEIRQLLEKHNASHIKIYPKIENQEGVDNIEEILAISDGLMV CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHCCCEEE ARGDLGIEIPTEEVTPVQKELIKKCNDLGKPVITATQMLDSMQRNPRPTRAEASDVANAI EECCCCEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH LDGTDAVMLSGETAAGDYPIESVQMQAAIAERTERMLDYKNLLKDRQKRSEHTVTDAISQ HCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVAHTAINLNAKAILTPTQSGYTAARTAKYRPEANIIAVTESERVARQLNLVWGVYPIVA HHHHHHEECCCEEEEECCCCCCCHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHH ETMPNNTDEMLVQASEAARHAGFVTDGDLVVISAGIPAATAGTTNMMKVHIVGHALADGR HHCCCCHHHHHHHHHHHHHHCCCEECCCEEEEECCCCCCCCCCCCEEEEEEEEEEHHCCC GIGERGVVGEVVVAKNADEANAKAKDGMILVAPFTDKEMMPAIEKAAGIITEDGGLTSHA CCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCEEECCCCCCCCC GIVGPSLRKPVIVGVDAATTSLRDGQMISIDPLTGKIYNA CCCCCCCCCCEEEEECCHHCCCCCCCEEEEECCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7549104 [H]