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The map label for this gene is yqeN [H]

Identifier: 229916357

GI number: 229916357

Start: 579606

End: 580625

Strand: Reverse

Name: yqeN [H]

Synonym: EAT1b_0627

Alternate gene names: 229916357

Gene position: 580625-579606 (Counterclockwise)

Preceding gene: 229916359

Following gene: 229916356

Centisome position: 19.35

GC content: 48.33

Gene sequence:

>1020_bases
GTGAAAGTGGTGTGTGTTTTGAATGAACCGTGGTTACATAATGGAAAACTGGCGAGCGTCTATGTTCTCCATGGCACCGA
AAAATATTTGTTAGAGACGTGGGAACGTGAAATCGTGAAAGCGGCCAATCCATCCGGTGATCAATTTGATGTCATGCAAT
TAGATCTTCAAGAGACGTCACTCGATACGGCGCTTGATGAAGCGGAGACGGTCCCTTTCTTTAGTGAATATCGCACGGTT
ATCGTGAAAAATGCCCAGTTCTTAACGGGTGCGAAAGAGAAGCAAAAGCACAATGTCGACCGTCTGGCGGAATATGTCGT
GCAACCGGCGACCTACTCGGTTCTTGTCTTGATCGTCGAGTCAGAAAAACTCGATGAGCGGAAGAAAATCGTGAAGCGTC
TGAAAGAGCGTGCCATCGTCCTCGAAGCGAAAAAGCCGAGCCAAAACGAACTGATGCGATACGTGAACGATGCATTGAGT
CGTGAACAACAAAAGATGGAGCGCTCTACGATGGAGCGTCTTTTATTCCTATGTCAGGATGATTGGGGAAAGTTGGTTCG
CGAACTAGAGAAGCTACAGTTGTACGCGGGAACGGGTGCGACGATTCCGATTGAGATTGTGAATGATTTAGTTCCACGTA
CATTAGAAGATAACGTCTTTCAGCTCTCGGAGCTTCTCGTCAAACGACAAGCTGATGCAGCGCTTCGATTGGTTCGGGAT
TTAGAAAAACAAGGGCAAGAACTGATTGGGCTACTCGGGTTGCTTGCTCGGCAATATCGGAACATGTACCTGTCGAAACA
GTTGACAGAGGCAGGCTATGGAGAGAAGCAAATCGCATCGAAAATCGGGGCCCACCCGTACACAATCAAATTGGCGACAC
AAGCGAGTCGCGGCTTTTCAGAGGCTCAGCTCGCACGTGCGTTGACATTGATTGCAGACGCGGACGAAGCCATGAAAACA
GGACGAGGTGACAAACAGATCGTATTCGATACGCTCGTTTGTCAACTGGCCTTATTGTGA

Upstream 100 bases:

>100_bases
GTACTGAGTTGATTTGCATATTAGGTCCCTCCTTATCATACTTCCTTTATAAGTATAGCGAATCATGGGAAGATAATCTA
TGTTTAGATGAGAATAAATT

Downstream 100 bases:

>100_bases
GGTGAGGGAATGGGATTCAAACAAGTGACGCTTCAAGACGTGATTCCACTCCGTCATGTTGTGCTCAGACCAGGAAAAGA
CGTTGAGACATGCTATTTTG

Product: DNA polymerase III, delta subunit

Products: diphosphate; DNAn+1

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MKVVCVLNEPWLHNGKLASVYVLHGTEKYLLETWEREIVKAANPSGDQFDVMQLDLQETSLDTALDEAETVPFFSEYRTV
IVKNAQFLTGAKEKQKHNVDRLAEYVVQPATYSVLVLIVESEKLDERKKIVKRLKERAIVLEAKKPSQNELMRYVNDALS
REQQKMERSTMERLLFLCQDDWGKLVRELEKLQLYAGTGATIPIEIVNDLVPRTLEDNVFQLSELLVKRQADAALRLVRD
LEKQGQELIGLLGLLARQYRNMYLSKQLTEAGYGEKQIASKIGAHPYTIKLATQASRGFSEAQLARALTLIADADEAMKT
GRGDKQIVFDTLVCQLALL

Sequences:

>Translated_339_residues
MKVVCVLNEPWLHNGKLASVYVLHGTEKYLLETWEREIVKAANPSGDQFDVMQLDLQETSLDTALDEAETVPFFSEYRTV
IVKNAQFLTGAKEKQKHNVDRLAEYVVQPATYSVLVLIVESEKLDERKKIVKRLKERAIVLEAKKPSQNELMRYVNDALS
REQQKMERSTMERLLFLCQDDWGKLVRELEKLQLYAGTGATIPIEIVNDLVPRTLEDNVFQLSELLVKRQADAALRLVRD
LEKQGQELIGLLGLLARQYRNMYLSKQLTEAGYGEKQIASKIGAHPYTIKLATQASRGFSEAQLARALTLIADADEAMKT
GRGDKQIVFDTLVCQLALL
>Mature_339_residues
MKVVCVLNEPWLHNGKLASVYVLHGTEKYLLETWEREIVKAANPSGDQFDVMQLDLQETSLDTALDEAETVPFFSEYRTV
IVKNAQFLTGAKEKQKHNVDRLAEYVVQPATYSVLVLIVESEKLDERKKIVKRLKERAIVLEAKKPSQNELMRYVNDALS
REQQKMERSTMERLLFLCQDDWGKLVRELEKLQLYAGTGATIPIEIVNDLVPRTLEDNVFQLSELLVKRQADAALRLVRD
LEKQGQELIGLLGLLARQYRNMYLSKQLTEAGYGEKQIASKIGAHPYTIKLATQASRGFSEAQLARALTLIADADEAMKT
GRGDKQIVFDTLVCQLALL

Specific function: Unknown

COG id: COG1466

COG function: function code L; DNA polymerase III, delta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008921
- InterPro:   IPR010372
- InterPro:   IPR005790 [H]

Pfam domain/function: PF06144 DNA_pol3_delta [H]

EC number: 2.7.7.7

Molecular weight: Translated: 38483; Mature: 38483

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVVCVLNEPWLHNGKLASVYVLHGTEKYLLETWEREIVKAANPSGDQFDVMQLDLQETS
CEEEEEECCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHH
LDTALDEAETVPFFSEYRTVIVKNAQFLTGAKEKQKHNVDRLAEYVVQPATYSVLVLIVE
HHHHHHHHHCCCHHHHHHHHHEECCHHHCCCHHHHHCCHHHHHHHHHCCCCEEEEEEEEC
SEKLDERKKIVKRLKERAIVLEAKKPSQNELMRYVNDALSREQQKMERSTMERLLFLCQD
CCCHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DWGKLVRELEKLQLYAGTGATIPIEIVNDLVPRTLEDNVFQLSELLVKRQADAALRLVRD
HHHHHHHHHHHHHHEECCCCEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEKQGQELIGLLGLLARQYRNMYLSKQLTEAGYGEKQIASKIGAHPYTIKLATQASRGFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEECCCCCCCH
EAQLARALTLIADADEAMKTGRGDKQIVFDTLVCQLALL
HHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKVVCVLNEPWLHNGKLASVYVLHGTEKYLLETWEREIVKAANPSGDQFDVMQLDLQETS
CEEEEEECCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHH
LDTALDEAETVPFFSEYRTVIVKNAQFLTGAKEKQKHNVDRLAEYVVQPATYSVLVLIVE
HHHHHHHHHCCCHHHHHHHHHEECCHHHCCCHHHHHCCHHHHHHHHHCCCCEEEEEEEEC
SEKLDERKKIVKRLKERAIVLEAKKPSQNELMRYVNDALSREQQKMERSTMERLLFLCQD
CCCHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DWGKLVRELEKLQLYAGTGATIPIEIVNDLVPRTLEDNVFQLSELLVKRQADAALRLVRD
HHHHHHHHHHHHHHEECCCCEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEKQGQELIGLLGLLARQYRNMYLSKQLTEAGYGEKQIASKIGAHPYTIKLATQASRGFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEECCCCCCCH
EAQLARALTLIADADEAMKTGRGDKQIVFDTLVCQLALL
HHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]