| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is yqfF [H]
Identifier: 229916330
GI number: 229916330
Start: 549890
End: 551977
Strand: Reverse
Name: yqfF [H]
Synonym: EAT1b_0599
Alternate gene names: 229916330
Gene position: 551977-549890 (Counterclockwise)
Preceding gene: 229916331
Following gene: 229916329
Centisome position: 18.4
GC content: 48.61
Gene sequence:
>2088_bases ATGCAGCAAGCTAAAAACTGGACAGTCGCGACCATCTCGTTGATTTTCTTTCTCTTATTAGGCGCCATTCTATACTTTAC CGTGCGCCCATCCATCATCAGTGTGGAACCGCTCGGGATTGCCGAACAGGATATCCGGTCTCCGATCACGGTTGAGGACC GTGTTGCGACCGAACGATTGAAACAAGAAGTGACAAATGGTGTTGGCAGTCAATTCTCATTGAGAAAAGAATTTGCAGAC CAACAAATCGCTAAAGTTGAGCAGTTGTTCGCAGCATTCGACCAGACGGATGAGGAGACTGAACTGGCGGACATTAAAAA CCGTCTAAATTCTACAGAGGCGAACGGGGTATTAGCTGATGAAGAGTTGAATTCGCTTCTTGAAGCGAGTGAGGACACTC GACAAACGGTAGAAGATGTCACAGTCACTGCATTACAACAAGTGATGGACGATCGGATTGAGACGAGTAATGAAGCGGTC GCTGCCGCTCGAGACCGAGCTGCAGCGATTATCGATCAATCGCCGCTCTCGTTTGAGTTCCGTGCTATCTCGAAAACGTT AAGCGATGAACTTATCGTACCGAACTATGTGTTTGACTCTGAGGCGACCCGTCAAAAAGAACAAGAGGCCGTCGATGCTG TCGATCCTGTCATCATTCAAGAAGGACAGCTACTCGTCAGCCAAGGCGAGGTGGTGACTCGAGAGATTTACCGGAAATTA GAGCTATCCGGTGCCATCGACCCGAATCGTTCGCTTGCGCCGTTATTCGGATCATTCTTACTGAGTGCATTGTTGACCGG TGGGTTTCTGTTCATGCTCATTCGCTCGAAAATCAAAGACCTGTTACTGAGTCCGAAAATCCTAGTGACGGTCTATGGCT TGTTACTCTTACAACTTGGCATCTTTTTTGGTGTCGGATACATCGGTGTCGATTTTACGACATATGCCTATATTTTGGCG CCGACCGCGTTCGTCGTATTGCTTCTACGCATCCTAATCGATGAACGAGTCGCGCTCGCCTCAGCATTCATTACGATGAT TGCCGGGAGTGTCGTTGTCACGTTCGGACAGAGCACGAATTTCATGACGCTCGTGTACGTGGCGACCGGTAGTTTTCTAG CTGTCTTTTTAGTTGAACCGAAAATTCAGCGAAAGCGACTATTCTTATCAGGGGTGTTACTCGGTTTCGTCAACATCATC ATGGTCATCGCCTTACTCTTACTTCGGAACGTGCAAGTTTCCTGGGAAATGGCGATGTATCTTTCCGGATTTGCCGTCAT TAGCGCCTTGCTCTCCATTGTCTTGACGTTCGGCTTCCTGCCATTTTTGGAACCGTGGTTTGGTGTCTTGTCTTCTGGTC GACTCGTTGAATTGATGAGTCCGACGCATCCATTGCTGCGGAAACTTTTAATGGAGGCACCTGGTACGTATCATCATAGT ATGATGGTGGCGAATTTGGCGGAGTCCGCATGTGAGGCGATTGGCGCAGATGGTCTCCTCGCGCGTGTTGCGAGCTACTA TCACGATCTTGGGAAGACGGAACGTCCCCTGCATTTCATTGAAAATCAGCAAGGTGGAGGGAATCCCCACGATCGCTTGA CGCCTGAAGAATCGGCAGACATCATCATGGCTCATCCTTATGACGGAGCGGATCTGTTGCGACGTTATAAGTTACCGAAA GAAATCATCGATATCGCAGAACAGCATCACGGTACGTCTTTATTAAAATATTTCTACGTGAAAGCGAAAGAAGATCCTGA TAAAGAGGTGTTAGAGTCTCGTTTCCGCTACCCTGGTCCAAAGCCACAATCGCGCGAGGCGGCCGTTGTCATGATTGTCG ACTCAATCGAAGCGGCCGTCCGCTCGCAAAAACAACCGACGCCAGAAAAAATCCGAATGCTCGTTCGAACGATCATTCGT GACAAGTTGGCGGATGGGCAGTTCGAAGAATGTGAATTGACGACGAAAGAAATTTGGCGCGTCGGAGAGAGTGCGTGTGA GACACTGACCGGCTTGTTCCACGAACGAATCGAATACCCAGAATTAAAGAAAGAGGGAGAATTACATGCAAATCATCTCG AACGATGA
Upstream 100 bases:
>100_bases CGTCCGTCATCCGCTCGTCAAGAAAATCATCAACGCCTATAGTACGGACCTCACTTAAATGTACGGGTGAGGTCACAAGA TCGTGAAAGGGGGGGCACGA
Downstream 100 bases:
>100_bases ACATGAATTGTTAACAACATCTCAAATCGAGCTCGTCGAGTCGATTTTACAACATGCCGCTCAATTAGAAGGGGTGGAAG AACCAAGCGAATTGTCGGTC
Product: 7TM receptor with intracellular metal dependent phosphohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 695; Mature: 695
Protein sequence:
>695_residues MQQAKNWTVATISLIFFLLLGAILYFTVRPSIISVEPLGIAEQDIRSPITVEDRVATERLKQEVTNGVGSQFSLRKEFAD QQIAKVEQLFAAFDQTDEETELADIKNRLNSTEANGVLADEELNSLLEASEDTRQTVEDVTVTALQQVMDDRIETSNEAV AAARDRAAAIIDQSPLSFEFRAISKTLSDELIVPNYVFDSEATRQKEQEAVDAVDPVIIQEGQLLVSQGEVVTREIYRKL ELSGAIDPNRSLAPLFGSFLLSALLTGGFLFMLIRSKIKDLLLSPKILVTVYGLLLLQLGIFFGVGYIGVDFTTYAYILA PTAFVVLLLRILIDERVALASAFITMIAGSVVVTFGQSTNFMTLVYVATGSFLAVFLVEPKIQRKRLFLSGVLLGFVNII MVIALLLLRNVQVSWEMAMYLSGFAVISALLSIVLTFGFLPFLEPWFGVLSSGRLVELMSPTHPLLRKLLMEAPGTYHHS MMVANLAESACEAIGADGLLARVASYYHDLGKTERPLHFIENQQGGGNPHDRLTPEESADIIMAHPYDGADLLRRYKLPK EIIDIAEQHHGTSLLKYFYVKAKEDPDKEVLESRFRYPGPKPQSREAAVVMIVDSIEAAVRSQKQPTPEKIRMLVRTIIR DKLADGQFEECELTTKEIWRVGESACETLTGLFHERIEYPELKKEGELHANHLER
Sequences:
>Translated_695_residues MQQAKNWTVATISLIFFLLLGAILYFTVRPSIISVEPLGIAEQDIRSPITVEDRVATERLKQEVTNGVGSQFSLRKEFAD QQIAKVEQLFAAFDQTDEETELADIKNRLNSTEANGVLADEELNSLLEASEDTRQTVEDVTVTALQQVMDDRIETSNEAV AAARDRAAAIIDQSPLSFEFRAISKTLSDELIVPNYVFDSEATRQKEQEAVDAVDPVIIQEGQLLVSQGEVVTREIYRKL ELSGAIDPNRSLAPLFGSFLLSALLTGGFLFMLIRSKIKDLLLSPKILVTVYGLLLLQLGIFFGVGYIGVDFTTYAYILA PTAFVVLLLRILIDERVALASAFITMIAGSVVVTFGQSTNFMTLVYVATGSFLAVFLVEPKIQRKRLFLSGVLLGFVNII MVIALLLLRNVQVSWEMAMYLSGFAVISALLSIVLTFGFLPFLEPWFGVLSSGRLVELMSPTHPLLRKLLMEAPGTYHHS MMVANLAESACEAIGADGLLARVASYYHDLGKTERPLHFIENQQGGGNPHDRLTPEESADIIMAHPYDGADLLRRYKLPK EIIDIAEQHHGTSLLKYFYVKAKEDPDKEVLESRFRYPGPKPQSREAAVVMIVDSIEAAVRSQKQPTPEKIRMLVRTIIR DKLADGQFEECELTTKEIWRVGESACETLTGLFHERIEYPELKKEGELHANHLER >Mature_695_residues MQQAKNWTVATISLIFFLLLGAILYFTVRPSIISVEPLGIAEQDIRSPITVEDRVATERLKQEVTNGVGSQFSLRKEFAD QQIAKVEQLFAAFDQTDEETELADIKNRLNSTEANGVLADEELNSLLEASEDTRQTVEDVTVTALQQVMDDRIETSNEAV AAARDRAAAIIDQSPLSFEFRAISKTLSDELIVPNYVFDSEATRQKEQEAVDAVDPVIIQEGQLLVSQGEVVTREIYRKL ELSGAIDPNRSLAPLFGSFLLSALLTGGFLFMLIRSKIKDLLLSPKILVTVYGLLLLQLGIFFGVGYIGVDFTTYAYILA PTAFVVLLLRILIDERVALASAFITMIAGSVVVTFGQSTNFMTLVYVATGSFLAVFLVEPKIQRKRLFLSGVLLGFVNII MVIALLLLRNVQVSWEMAMYLSGFAVISALLSIVLTFGFLPFLEPWFGVLSSGRLVELMSPTHPLLRKLLMEAPGTYHHS MMVANLAESACEAIGADGLLARVASYYHDLGKTERPLHFIENQQGGGNPHDRLTPEESADIIMAHPYDGADLLRRYKLPK EIIDIAEQHHGTSLLKYFYVKAKEDPDKEVLESRFRYPGPKPQSREAAVVMIVDSIEAAVRSQKQPTPEKIRMLVRTIIR DKLADGQFEECELTTKEIWRVGESACETLTGLFHERIEYPELKKEGELHANHLER
Specific function: Unknown
COG id: COG1480
COG function: function code R; Predicted membrane-associated HD superfamily hydrolase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011624 - InterPro: IPR011621 - InterPro: IPR003607 - InterPro: IPR006675 [H]
Pfam domain/function: PF07698 7TM-7TMR_HD; PF07697 7TMR-HDED [H]
EC number: NA
Molecular weight: Translated: 77493; Mature: 77493
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQAKNWTVATISLIFFLLLGAILYFTVRPSIISVEPLGIAEQDIRSPITVEDRVATERL CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHCCCCCHHHHHHHHHH KQEVTNGVGSQFSLRKEFADQQIAKVEQLFAAFDQTDEETELADIKNRLNSTEANGVLAD HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCH EELNSLLEASEDTRQTVEDVTVTALQQVMDDRIETSNEAVAAARDRAAAIIDQSPLSFEF HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHH RAISKTLSDELIVPNYVFDSEATRQKEQEAVDAVDPVIIQEGQLLVSQGEVVTREIYRKL HHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHHHCCHHCCCCCEEECCCHHHHHHHHHHH ELSGAIDPNRSLAPLFGSFLLSALLTGGFLFMLIRSKIKDLLLSPKILVTVYGLLLLQLG HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH IFFGVGYIGVDFTTYAYILAPTAFVVLLLRILIDERVALASAFITMIAGSVVVTFGQSTN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCC FMTLVYVATGSFLAVFLVEPKIQRKRLFLSGVLLGFVNIIMVIALLLLRNVQVSWEMAMY CEEEEEEHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH LSGFAVISALLSIVLTFGFLPFLEPWFGVLSSGRLVELMSPTHPLLRKLLMEAPGTYHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCCCHHHH MMVANLAESACEAIGADGLLARVASYYHDLGKTERPLHFIENQQGGGNPHDRLTPEESAD HHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCC IIMAHPYDGADLLRRYKLPKEIIDIAEQHHGTSLLKYFYVKAKEDPDKEVLESRFRYPGP EEEECCCCCHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCC KPQSREAAVVMIVDSIEAAVRSQKQPTPEKIRMLVRTIIRDKLADGQFEECELTTKEIWR CCCCCCCEEEEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHH VGESACETLTGLFHERIEYPELKKEGELHANHLER HHHHHHHHHHHHHHHHCCCCCHHCCCCCCHHHCCC >Mature Secondary Structure MQQAKNWTVATISLIFFLLLGAILYFTVRPSIISVEPLGIAEQDIRSPITVEDRVATERL CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHCCCCCHHHHHHHHHH KQEVTNGVGSQFSLRKEFADQQIAKVEQLFAAFDQTDEETELADIKNRLNSTEANGVLAD HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCH EELNSLLEASEDTRQTVEDVTVTALQQVMDDRIETSNEAVAAARDRAAAIIDQSPLSFEF HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHH RAISKTLSDELIVPNYVFDSEATRQKEQEAVDAVDPVIIQEGQLLVSQGEVVTREIYRKL HHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHHHCCHHCCCCCEEECCCHHHHHHHHHHH ELSGAIDPNRSLAPLFGSFLLSALLTGGFLFMLIRSKIKDLLLSPKILVTVYGLLLLQLG HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH IFFGVGYIGVDFTTYAYILAPTAFVVLLLRILIDERVALASAFITMIAGSVVVTFGQSTN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCC FMTLVYVATGSFLAVFLVEPKIQRKRLFLSGVLLGFVNIIMVIALLLLRNVQVSWEMAMY CEEEEEEHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH LSGFAVISALLSIVLTFGFLPFLEPWFGVLSSGRLVELMSPTHPLLRKLLMEAPGTYHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCCCHHHH MMVANLAESACEAIGADGLLARVASYYHDLGKTERPLHFIENQQGGGNPHDRLTPEESAD HHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCC IIMAHPYDGADLLRRYKLPKEIIDIAEQHHGTSLLKYFYVKAKEDPDKEVLESRFRYPGP EEEECCCCCHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCC KPQSREAAVVMIVDSIEAAVRSQKQPTPEKIRMLVRTIIRDKLADGQFEECELTTKEIWR CCCCCCCEEEEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHH VGESACETLTGLFHERIEYPELKKEGELHANHLER HHHHHHHHHHHHHHHHCCCCCHHCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]