| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is ydiA [C]
Identifier: 229916322
GI number: 229916322
Start: 542685
End: 543500
Strand: Reverse
Name: ydiA [C]
Synonym: EAT1b_0591
Alternate gene names: 229916322
Gene position: 543500-542685 (Counterclockwise)
Preceding gene: 229916323
Following gene: 229916321
Centisome position: 18.12
GC content: 49.51
Gene sequence:
>816_bases TTGACTACGAAACAACTCGTGTTCGTTGTAAGTGACTCGGTCGGGGAGACGTGCGAACTCGTCGTCCGGGCAGCGAGTAT CCAATTCCACGAGAATGCGATTGATACTCTTCGCATCCCGTTCGTCGAAGATGAGCAGACGATTATCGATGTCGTCACGC AAGCGAAAGCACAACAGGCCATCATTGCGTTCACGCTCGTTAATGAGGAACATCGCGCCCTTCTCATGCGACTCGGTGAA GAACATCAAGTGAAGACGGTAGATTTGCTCGGAGATTTGCTCGATGTGTTATCTGGTCAATTGAAAGAAGCGCCACGTGA AAAGCCGGGGCTCATCTATCGATTGGATGATGATTACTTCCGAAAAATCGAGGCGATGGAGTTTGCCGTCAAGTATGACG ATGGTCGGGACCCGCGTGGGCTGAAAAAAGCCGATATCGTGTTGGTCGGTGTTTCTCGAACGTCAAAGACGCCGCTATCT CAATATTTGGCACTGAAACGATATAAAGTCGCGAACGTACCGCTCGTTCCAGAATCGAGACCGCCTGAGGAGTTGTTTGA TTTGCCTGCTGAACGATGTGTCGGGTTGATCATCTCTCCGGAAAAGCTGATTTCAATTCGGATGGAACGTCTCAAATCGC TCGGTTTGAAGCCGGAAGCCGATTATGCGCAACTCGAGCGAATCAATCGTGAACTCGAGTATGCGCGCGGTATTTATGAA CGAATCGGTTGCGATGTCATCGATGTGACGAACAAAGCAGTTGAAGAAACGGCAGGGATCATCTTGCGTCATCTCGAACA GTCTAAAGATGATTGA
Upstream 100 bases:
>100_bases GATGGGAAACTGATTGTGCTCGGACGTATGACGAAGACCAATATGACGAAGGTGCTCATTGCGCTAGCGAACGATGAGTC GATCTGAGGAGGAAACCGAA
Downstream 100 bases:
>100_bases ATGAGTAAGTGTTTCAATTAGTAATCATTGCTTCAAGAGGGTATAATAGAGTATTGACAGTACAGTGAAACGGAACGTGA TGAGCGTTCCGTTTCGTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 271; Mature: 270
Protein sequence:
>271_residues MTTKQLVFVVSDSVGETCELVVRAASIQFHENAIDTLRIPFVEDEQTIIDVVTQAKAQQAIIAFTLVNEEHRALLMRLGE EHQVKTVDLLGDLLDVLSGQLKEAPREKPGLIYRLDDDYFRKIEAMEFAVKYDDGRDPRGLKKADIVLVGVSRTSKTPLS QYLALKRYKVANVPLVPESRPPEELFDLPAERCVGLIISPEKLISIRMERLKSLGLKPEADYAQLERINRELEYARGIYE RIGCDVIDVTNKAVEETAGIILRHLEQSKDD
Sequences:
>Translated_271_residues MTTKQLVFVVSDSVGETCELVVRAASIQFHENAIDTLRIPFVEDEQTIIDVVTQAKAQQAIIAFTLVNEEHRALLMRLGE EHQVKTVDLLGDLLDVLSGQLKEAPREKPGLIYRLDDDYFRKIEAMEFAVKYDDGRDPRGLKKADIVLVGVSRTSKTPLS QYLALKRYKVANVPLVPESRPPEELFDLPAERCVGLIISPEKLISIRMERLKSLGLKPEADYAQLERINRELEYARGIYE RIGCDVIDVTNKAVEETAGIILRHLEQSKDD >Mature_270_residues TTKQLVFVVSDSVGETCELVVRAASIQFHENAIDTLRIPFVEDEQTIIDVVTQAKAQQAIIAFTLVNEEHRALLMRLGEE HQVKTVDLLGDLLDVLSGQLKEAPREKPGLIYRLDDDYFRKIEAMEFAVKYDDGRDPRGLKKADIVLVGVSRTSKTPLSQ YLALKRYKVANVPLVPESRPPEELFDLPAERCVGLIISPEKLISIRMERLKSLGLKPEADYAQLERINRELEYARGIYER IGCDVIDVTNKAVEETAGIILRHLEQSKDD
Specific function: Unknown
COG id: COG1806
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pyruvate, phosphate dikinase regulatory protein family [H]
Homologues:
Organism=Escherichia coli, GI1787995, Length=273, Percent_Identity=28.9377289377289, Blast_Score=93, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005177 [H]
Pfam domain/function: PF03618 DUF299 [H]
EC number: NA
Molecular weight: Translated: 30658; Mature: 30527
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTKQLVFVVSDSVGETCELVVRAASIQFHENAIDTLRIPFVEDEQTIIDVVTQAKAQQA CCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHE IIAFTLVNEEHRALLMRLGEEHQVKTVDLLGDLLDVLSGQLKEAPREKPGLIYRLDDDYF EEEEEEECHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHH RKIEAMEFAVKYDDGRDPRGLKKADIVLVGVSRTSKTPLSQYLALKRYKVANVPLVPESR HHHHHHHEEEEECCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCC PPEELFDLPAERCVGLIISPEKLISIRMERLKSLGLKPEADYAQLERINRELEYARGIYE CHHHHHCCCHHHHEEEEECHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH RIGCDVIDVTNKAVEETAGIILRHLEQSKDD HHCCCEEEHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TTKQLVFVVSDSVGETCELVVRAASIQFHENAIDTLRIPFVEDEQTIIDVVTQAKAQQA CCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHE IIAFTLVNEEHRALLMRLGEEHQVKTVDLLGDLLDVLSGQLKEAPREKPGLIYRLDDDYF EEEEEEECHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHH RKIEAMEFAVKYDDGRDPRGLKKADIVLVGVSRTSKTPLSQYLALKRYKVANVPLVPESR HHHHHHHEEEEECCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCC PPEELFDLPAERCVGLIISPEKLISIRMERLKSLGLKPEADYAQLERINRELEYARGIYE CHHHHHCCCHHHHEEEEECHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH RIGCDVIDVTNKAVEETAGIILRHLEQSKDD HHCCCEEEHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]