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The map label for this gene is yqfO [H]

Identifier: 229916317

GI number: 229916317

Start: 537222

End: 538334

Strand: Reverse

Name: yqfO [H]

Synonym: EAT1b_0586

Alternate gene names: 229916317

Gene position: 538334-537222 (Counterclockwise)

Preceding gene: 229916318

Following gene: 229916315

Centisome position: 17.95

GC content: 48.25

Gene sequence:

>1113_bases
ATGGCGAACGGCAATCAAGTGATTCAATTGTTTGAGGAATTTGCACCGAAACATTTAGCGGTCGAAGGGGATAAAATCGG
CTTGCAGATTGGGTCGCTCAACAAAGAAGTCAAACGGGTCATGGTCACGCTTGATGTACTTGAATCGGTTGTGGATGAAG
CGATTGAGAAACAAATCGATTTGATTATCGCGCATCATCCACCCATCTTTAGTCCGTTAGCTCAAGTCAATGACCGTTCC
ACGGCTGGGAAGATTACGATGAAATGTATTCAGCACGATATCGCGGTCTATGTCGCTCATACGAATTTAGACGTATGCAG
CGGTGGTGTGAACGATTGGATGAGTGAGGCGATCGGTCTCCGAGATACGAAAGTACTCGTCCCGACCTATGATGAGCCGG
TCTATAAACTAAGTGTATTCGTTCCATCCACGCATGCGCATGACGTATCCCGGGCTCTAGGAAAAGCGGGTGCAGGACAT
ATTGGTGACTATGCGGACTGTCAGTTCCGTGTTTCCGGAACGGGGCAATTCACTCCGCTCGAGGGGACAGATCCCTTCAT
CGGTCGCCCGCATAAAACGGAACAAGTGGACGAGGTGAAAATCGAAACGGTCGTTCGGGAGAGTCAGAAGAAACGTGTAC
TAAAAGCAATGAAAGACGCCCATCCATATGAGGAAGTGGCGTATGACCTCATGCGCGATGAAATCGAGGGTCATGTATTT
GGGCTAGGGCGAATCGGTCGACTTGAACAAGCCATGACACTTGAACAGTTTGCCGAACACGTGAAAACAAGCTTTGGAGT
TGAGGGCGTGCGAGTCGTCGGAGACCCGGGTCGTTCGATTGAAAAAGTTGCCATATTAGGTGGAGACGGGAATAAGTATG
TGTCTACTGCGCATTTCAAAGGTGCAGATGCATATGTGACGGGTGATTTATATTTCCACGTGGCTCATGATGCGATGGCG
CTTGGACTCGCAGTCGTAGACCCGGGACATCATGTCGAGAGTATCATGAAACAAGGTGTGATCGACGTGCTCAGCAAAAA
GTTTGAAAAAGCGAAAATCAATGTCGACTTGATTCAATCTGTTGCCAACACGAATCCGTTTCAATTCAAGTAA

Upstream 100 bases:

>100_bases
TGCTTGGACAGATGGCAGCTGGCATTCAATCGGAAGCCTTGATTCAAAAACAAGTGGAGTTCAAACGGATGCGTGACAAG
ATGAGAGAGGTGAGTCAGTA

Downstream 100 bases:

>100_bases
AGCCTAAAAATCCCCCATCCTCTGAGAGAATGGGGGATTCCTTCACTTACGCAATGCTTTCACTTTCGGTAAGATACTCC
GAAGTTCAAGAAATGGCGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 370; Mature: 369

Protein sequence:

>370_residues
MANGNQVIQLFEEFAPKHLAVEGDKIGLQIGSLNKEVKRVMVTLDVLESVVDEAIEKQIDLIIAHHPPIFSPLAQVNDRS
TAGKITMKCIQHDIAVYVAHTNLDVCSGGVNDWMSEAIGLRDTKVLVPTYDEPVYKLSVFVPSTHAHDVSRALGKAGAGH
IGDYADCQFRVSGTGQFTPLEGTDPFIGRPHKTEQVDEVKIETVVRESQKKRVLKAMKDAHPYEEVAYDLMRDEIEGHVF
GLGRIGRLEQAMTLEQFAEHVKTSFGVEGVRVVGDPGRSIEKVAILGGDGNKYVSTAHFKGADAYVTGDLYFHVAHDAMA
LGLAVVDPGHHVESIMKQGVIDVLSKKFEKAKINVDLIQSVANTNPFQFK

Sequences:

>Translated_370_residues
MANGNQVIQLFEEFAPKHLAVEGDKIGLQIGSLNKEVKRVMVTLDVLESVVDEAIEKQIDLIIAHHPPIFSPLAQVNDRS
TAGKITMKCIQHDIAVYVAHTNLDVCSGGVNDWMSEAIGLRDTKVLVPTYDEPVYKLSVFVPSTHAHDVSRALGKAGAGH
IGDYADCQFRVSGTGQFTPLEGTDPFIGRPHKTEQVDEVKIETVVRESQKKRVLKAMKDAHPYEEVAYDLMRDEIEGHVF
GLGRIGRLEQAMTLEQFAEHVKTSFGVEGVRVVGDPGRSIEKVAILGGDGNKYVSTAHFKGADAYVTGDLYFHVAHDAMA
LGLAVVDPGHHVESIMKQGVIDVLSKKFEKAKINVDLIQSVANTNPFQFK
>Mature_369_residues
ANGNQVIQLFEEFAPKHLAVEGDKIGLQIGSLNKEVKRVMVTLDVLESVVDEAIEKQIDLIIAHHPPIFSPLAQVNDRST
AGKITMKCIQHDIAVYVAHTNLDVCSGGVNDWMSEAIGLRDTKVLVPTYDEPVYKLSVFVPSTHAHDVSRALGKAGAGHI
GDYADCQFRVSGTGQFTPLEGTDPFIGRPHKTEQVDEVKIETVVRESQKKRVLKAMKDAHPYEEVAYDLMRDEIEGHVFG
LGRIGRLEQAMTLEQFAEHVKTSFGVEGVRVVGDPGRSIEKVAILGGDGNKYVSTAHFKGADAYVTGDLYFHVAHDAMAL
GLAVVDPGHHVESIMKQGVIDVLSKKFEKAKINVDLIQSVANTNPFQFK

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

Organism=Homo sapiens, GI215272360, Length=369, Percent_Identity=23.0352303523035, Blast_Score=98, Evalue=1e-20,
Organism=Homo sapiens, GI56605983, Length=369, Percent_Identity=23.0352303523035, Blast_Score=98, Evalue=1e-20,
Organism=Homo sapiens, GI209862879, Length=369, Percent_Identity=23.0352303523035, Blast_Score=98, Evalue=1e-20,
Organism=Homo sapiens, GI215272362, Length=124, Percent_Identity=26.6129032258064, Blast_Score=75, Evalue=7e-14,
Organism=Saccharomyces cerevisiae, GI6321217, Length=139, Percent_Identity=29.4964028776978, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI19921430, Length=128, Percent_Identity=39.84375, Blast_Score=108, Evalue=9e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678
- InterPro:   IPR017221 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 40560; Mature: 40429

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANGNQVIQLFEEFAPKHLAVEGDKIGLQIGSLNKEVKRVMVTLDVLESVVDEAIEKQID
CCCHHHHHHHHHHHCCCEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHE
LIIAHHPPIFSPLAQVNDRSTAGKITMKCIQHDIAVYVAHTNLDVCSGGVNDWMSEAIGL
EEEECCCCCHHHHHHCCCCCCCHHHHHHHHHHCEEEEEEECCCHHHCCCHHHHHHHHCCC
RDTKVLVPTYDEPVYKLSVFVPSTHAHDVSRALGKAGAGHIGDYADCQFRVSGTGQFTPL
CCCEEEEECCCCCEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCC
EGTDPFIGRPHKTEQVDEVKIETVVRESQKKRVLKAMKDAHPYEEVAYDLMRDEIEGHVF
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEE
GLGRIGRLEQAMTLEQFAEHVKTSFGVEGVRVVGDPGRSIEKVAILGGDGNKYVSTAHFK
ECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEEECCCCCCEEEEEEEC
GADAYVTGDLYFHVAHDAMALGLAVVDPGHHVESIMKQGVIDVLSKKFEKAKINVDLIQS
CCCEEEEEEEEEEEEHHHHHHCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
VANTNPFQFK
HHCCCCCCCC
>Mature Secondary Structure 
ANGNQVIQLFEEFAPKHLAVEGDKIGLQIGSLNKEVKRVMVTLDVLESVVDEAIEKQID
CCHHHHHHHHHHHCCCEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHE
LIIAHHPPIFSPLAQVNDRSTAGKITMKCIQHDIAVYVAHTNLDVCSGGVNDWMSEAIGL
EEEECCCCCHHHHHHCCCCCCCHHHHHHHHHHCEEEEEEECCCHHHCCCHHHHHHHHCCC
RDTKVLVPTYDEPVYKLSVFVPSTHAHDVSRALGKAGAGHIGDYADCQFRVSGTGQFTPL
CCCEEEEECCCCCEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCC
EGTDPFIGRPHKTEQVDEVKIETVVRESQKKRVLKAMKDAHPYEEVAYDLMRDEIEGHVF
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEE
GLGRIGRLEQAMTLEQFAEHVKTSFGVEGVRVVGDPGRSIEKVAILGGDGNKYVSTAHFK
ECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEEECCCCCCEEEEEEEC
GADAYVTGDLYFHVAHDAMALGLAVVDPGHHVESIMKQGVIDVLSKKFEKAKINVDLIQS
CCCEEEEEEEEEEEEHHHHHHCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
VANTNPFQFK
HHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]