| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
Click here to switch to the map view.
The map label for this gene is kinA [H]
Identifier: 229916315
GI number: 229916315
Start: 534342
End: 536105
Strand: Reverse
Name: kinA [H]
Synonym: EAT1b_0584
Alternate gene names: 229916315
Gene position: 536105-534342 (Counterclockwise)
Preceding gene: 229916317
Following gene: 229916314
Centisome position: 17.87
GC content: 44.67
Gene sequence:
>1764_bases GTGAATCGCATGAAACCATTGCGTGAACTAAGAAAATCGTACTTTTTCCAAATTACGTTCATCATCATCATTATTTTAGC ACTTGTCATTTCATCACTTGCCTTCTCTGCTGACCGCGTCACGGTGTCTCGAGCAGAAGAATTGGCGAAAGAGCAATTTG ATTACGCCATCGATGACAGTATTGAGAATGTGGAGTCCCGACTTGGGAAATTGTATGAGGATTTAGTTTACTTAGGCGCT TACGTTGGAAATGAGCCATGGATTGAAGAACGGATCCGAACAGGATATTTGAATCAACGCACGAGTTTTACGTCCATCTT TTATTATGATGTCAATCAAGACTCATTTAAATGGTACTCGGAGCGACAAGTCGCCTCTTCTGTTCTGAAACGGGATCCGA AGTTCACGGAAGTATTGACTGCAAGTGGAAAAGAACTATATATGAGTGACCCTGTGATGATCAGTGGGGATATGGGAACT TTCCTATACGTTCCGGTCATCGAAGAAAATCGACCAATCGGTATTTTTGGGGGAAGCATTAGTGTCTTGAACTCTGACTT GTATCGTCGTTCGTTGGAATCTGCGAATGATGACATGATTCTATACTTGTTAGATGAGCAAGGCGAAGTGTTGACGACTT CGTTCAACTTGGTCACAGATGCAGAGCGTCGGATATCGCGTGAAGTCATCGACGAAGCATTAAATCGAAGCGAACGGACA ATCTTGAGTACGGATGAAGATACGGTAATGTTTGAACCGGATGCACGAGTCAGTGGATGGAGCATGCTCGCAAAACATCA AAATGACTCCGTCTATGAAACGGTCTACGACACGCGTTGGCAGTATTTGATGATTGCGCTCGTTACATTCTTCCTGAGCA TTCTCGTTGGATTGTTGCTTTCCCGGACGTTGACGAATCCGCTTGTCGAGCTGGTCAACCAGATTAAACAACAACAATCG CTCGGAACGATTTCATTGGAACGAACGGGTTCGAAAGAAGTGGAGACGCTACTCGATACGTATAACGATTATGCACAGCG GATGGAAACGTCACGACGTGAACAGTTGAGTCAGCAACAGTTGATTTTGCATCAAGAAAAATTAGCCTCGCTCGGTCAAT TGGCCGCCGGGATTGCCCATGAAATTCGAAATCCTCTGACTCCCGTCCATATCACGTTGCAGATGGTGCGCGAGGGTCAA GGTAGTTCAGATATGGTGGATGTCGCCATCAAAGAACTGGAGCGGGCGAATGATTTGATTTCAACGATGCTAACGCTCGC CAAACCCGATCAGGCTGGTAAAAATGAAGATTGGATCAACATGTTAGACTTTGCGAAACGACTTGAATTTTTAATGGATG CCGAATGTTACAAACGACCGACAAAATGGGAATTACTTGTACCGAACGACATGCCTCCATTTTATGCATCCTTTGATATG CTCGTTCAAATTATCTACAACCTCTTCAAAAATGCGGTCGATGCCGTCGAATCAAAAGGCGCTGACGGGAGTGTCGTCGT GACGGTACTCTTTACGGAGCAGGAATATCGCTTTTTGATTGAAGATAACGGAATTGGCATGAGTGAGGAACAACTCAAGA CAGTCGGTTCCGCCTTCAATACGACGAAGGAAAGTGGAAACGGTCTAGGAATCTATATGATTCAAGAGTACTTGAAGAGC GTTAACGGTGCGATGGAGATTGATAGTGTGATGAACAAAGGGACCGCGATTTTAATCAAAATCCCAAGGAGACAACCGTC ATGA
Upstream 100 bases:
>100_bases CGAAGTGCTTTCATACGTATTAGTCTAACATTGTTTCGAAAATACGAAAAGATTTGCGTGTATTCATGCTATAATTTTTA GGTTAGAGAGGAGGGACGCC
Downstream 100 bases:
>100_bases AAGGACTAAAACATTATTGGCTTTGGTTACCGATCGTGTGGGCCATGACGATTCTCCTTATCACCTCGATTCAACTCCCA GAGCAAAAGACGAATGAAAA
Product: histidine kinase
Products: NA
Alternate protein names: Stage II sporulation protein F; Stage II sporulation protein J [H]
Number of amino acids: Translated: 587; Mature: 587
Protein sequence:
>587_residues MNRMKPLRELRKSYFFQITFIIIIILALVISSLAFSADRVTVSRAEELAKEQFDYAIDDSIENVESRLGKLYEDLVYLGA YVGNEPWIEERIRTGYLNQRTSFTSIFYYDVNQDSFKWYSERQVASSVLKRDPKFTEVLTASGKELYMSDPVMISGDMGT FLYVPVIEENRPIGIFGGSISVLNSDLYRRSLESANDDMILYLLDEQGEVLTTSFNLVTDAERRISREVIDEALNRSERT ILSTDEDTVMFEPDARVSGWSMLAKHQNDSVYETVYDTRWQYLMIALVTFFLSILVGLLLSRTLTNPLVELVNQIKQQQS LGTISLERTGSKEVETLLDTYNDYAQRMETSRREQLSQQQLILHQEKLASLGQLAAGIAHEIRNPLTPVHITLQMVREGQ GSSDMVDVAIKELERANDLISTMLTLAKPDQAGKNEDWINMLDFAKRLEFLMDAECYKRPTKWELLVPNDMPPFYASFDM LVQIIYNLFKNAVDAVESKGADGSVVVTVLFTEQEYRFLIEDNGIGMSEEQLKTVGSAFNTTKESGNGLGIYMIQEYLKS VNGAMEIDSVMNKGTAILIKIPRRQPS
Sequences:
>Translated_587_residues MNRMKPLRELRKSYFFQITFIIIIILALVISSLAFSADRVTVSRAEELAKEQFDYAIDDSIENVESRLGKLYEDLVYLGA YVGNEPWIEERIRTGYLNQRTSFTSIFYYDVNQDSFKWYSERQVASSVLKRDPKFTEVLTASGKELYMSDPVMISGDMGT FLYVPVIEENRPIGIFGGSISVLNSDLYRRSLESANDDMILYLLDEQGEVLTTSFNLVTDAERRISREVIDEALNRSERT ILSTDEDTVMFEPDARVSGWSMLAKHQNDSVYETVYDTRWQYLMIALVTFFLSILVGLLLSRTLTNPLVELVNQIKQQQS LGTISLERTGSKEVETLLDTYNDYAQRMETSRREQLSQQQLILHQEKLASLGQLAAGIAHEIRNPLTPVHITLQMVREGQ GSSDMVDVAIKELERANDLISTMLTLAKPDQAGKNEDWINMLDFAKRLEFLMDAECYKRPTKWELLVPNDMPPFYASFDM LVQIIYNLFKNAVDAVESKGADGSVVVTVLFTEQEYRFLIEDNGIGMSEEQLKTVGSAFNTTKESGNGLGIYMIQEYLKS VNGAMEIDSVMNKGTAILIKIPRRQPS >Mature_587_residues MNRMKPLRELRKSYFFQITFIIIIILALVISSLAFSADRVTVSRAEELAKEQFDYAIDDSIENVESRLGKLYEDLVYLGA YVGNEPWIEERIRTGYLNQRTSFTSIFYYDVNQDSFKWYSERQVASSVLKRDPKFTEVLTASGKELYMSDPVMISGDMGT FLYVPVIEENRPIGIFGGSISVLNSDLYRRSLESANDDMILYLLDEQGEVLTTSFNLVTDAERRISREVIDEALNRSERT ILSTDEDTVMFEPDARVSGWSMLAKHQNDSVYETVYDTRWQYLMIALVTFFLSILVGLLLSRTLTNPLVELVNQIKQQQS LGTISLERTGSKEVETLLDTYNDYAQRMETSRREQLSQQQLILHQEKLASLGQLAAGIAHEIRNPLTPVHITLQMVREGQ GSSDMVDVAIKELERANDLISTMLTLAKPDQAGKNEDWINMLDFAKRLEFLMDAECYKRPTKWELLVPNDMPPFYASFDM LVQIIYNLFKNAVDAVESKGADGSVVVTVLFTEQEYRFLIEDNGIGMSEEQLKTVGSAFNTTKESGNGLGIYMIQEYLKS VNGAMEIDSVMNKGTAILIKIPRRQPS
Specific function: Phosphorylates the sporulation-regulatory proteins spo0A and spo0F. It also autophosphorylates in the presence of ATP [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 3 PAS (PER-ARNT-SIM) domains [H]
Homologues:
Organism=Escherichia coli, GI1788549, Length=271, Percent_Identity=29.1512915129151, Blast_Score=103, Evalue=3e-23, Organism=Escherichia coli, GI1790436, Length=243, Percent_Identity=29.2181069958848, Blast_Score=102, Evalue=8e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR013655 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF08447 PAS_3 [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 66854; Mature: 66854
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRMKPLRELRKSYFFQITFIIIIILALVISSLAFSADRVTVSRAEELAKEQFDYAIDDS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHH IENVESRLGKLYEDLVYLGAYVGNEPWIEERIRTGYLNQRTSFTSIFYYDVNQDSFKWYS HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCEEEEEEEECCCCHHHHHH ERQVASSVLKRDPKFTEVLTASGKELYMSDPVMISGDMGTFLYVPVIEENRPIGIFGGSI HHHHHHHHHHCCCCHHHHHHCCCCEEEECCCEEEECCCCCEEEEEEECCCCCEEEECCCH SVLNSDLYRRSLESANDDMILYLLDEQGEVLTTSFNLVTDAERRISREVIDEALNRSERT HHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCE ILSTDEDTVMFEPDARVSGWSMLAKHQNDSVYETVYDTRWQYLMIALVTFFLSILVGLLL EEECCCCEEEECCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SRTLTNPLVELVNQIKQQQSLGTISLERTGSKEVETLLDTYNDYAQRMETSRREQLSQQQ HHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LILHQEKLASLGQLAAGIAHEIRNPLTPVHITLQMVREGQGSSDMVDVAIKELERANDLI HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH STMLTLAKPDQAGKNEDWINMLDFAKRLEFLMDAECYKRPTKWELLVPNDMPPFYASFDM HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHCCCCCEEEECCCCCCCHHHHHHH LVQIIYNLFKNAVDAVESKGADGSVVVTVLFTEQEYRFLIEDNGIGMSEEQLKTVGSAFN HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHH TTKESGNGLGIYMIQEYLKSVNGAMEIDSVMNKGTAILIKIPRRQPS CCCCCCCCEEHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEECCCCCC >Mature Secondary Structure MNRMKPLRELRKSYFFQITFIIIIILALVISSLAFSADRVTVSRAEELAKEQFDYAIDDS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHH IENVESRLGKLYEDLVYLGAYVGNEPWIEERIRTGYLNQRTSFTSIFYYDVNQDSFKWYS HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCEEEEEEEECCCCHHHHHH ERQVASSVLKRDPKFTEVLTASGKELYMSDPVMISGDMGTFLYVPVIEENRPIGIFGGSI HHHHHHHHHHCCCCHHHHHHCCCCEEEECCCEEEECCCCCEEEEEEECCCCCEEEECCCH SVLNSDLYRRSLESANDDMILYLLDEQGEVLTTSFNLVTDAERRISREVIDEALNRSERT HHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCE ILSTDEDTVMFEPDARVSGWSMLAKHQNDSVYETVYDTRWQYLMIALVTFFLSILVGLLL EEECCCCEEEECCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SRTLTNPLVELVNQIKQQQSLGTISLERTGSKEVETLLDTYNDYAQRMETSRREQLSQQQ HHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LILHQEKLASLGQLAAGIAHEIRNPLTPVHITLQMVREGQGSSDMVDVAIKELERANDLI HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH STMLTLAKPDQAGKNEDWINMLDFAKRLEFLMDAECYKRPTKWELLVPNDMPPFYASFDM HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHCCCCCEEEECCCCCCCHHHHHHH LVQIIYNLFKNAVDAVESKGADGSVVVTVLFTEQEYRFLIEDNGIGMSEEQLKTVGSAFN HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHH TTKESGNGLGIYMIQEYLKSVNGAMEIDSVMNKGTAILIKIPRRQPS CCCCCCCCEEHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2104615; 2509430; 9384377 [H]