| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is yjbB [H]
Identifier: 229916299
GI number: 229916299
Start: 516786
End: 518429
Strand: Reverse
Name: yjbB [H]
Synonym: EAT1b_0568
Alternate gene names: 229916299
Gene position: 518429-516786 (Counterclockwise)
Preceding gene: 229916301
Following gene: 229916298
Centisome position: 17.28
GC content: 45.74
Gene sequence:
>1644_bases GTGGAATACAATTTGCAAGAAATGTTATTCATGTTTTTTGGAGGTCTAGGGATCTTCCTCTTCGGAATCAAATCGATGGG AGACGGACTCCAAAAGTCTGCAGGGAATCGCCTGCGAGACATCCTTGATAAGTATACAACGAATCCATTCCTCGGTGTAC TCGCCGGGATTATCGTGACAGTATTGATTCAATCATCTTCAGGTACAACCGTCATTACGGTCGGACTTGTTAGCGCCGGG TTCATGACACTCCGTCAAGCAATCGGGGTCATCATGGGGGCGAACATCGGTACGACGGTGACGGCGTTCATCATCGGATT CGATGTCGGAGAGTACGCGCTCCCGATTATTGCAATCGGTGCGGTACTATTGTTCTTCTTTAAAAAAGAAAAATTACAAC ACCTCGGTCAAATCTTCTTTGGCTTCGGGATGTTGTTCTATGGACTTGAATTGATGGGAAGTGGGATGAAACCACTTCGT TCAAGCGAATATTTCATCGACTTGACGCAATCAATGAGTGACAATCCGTTCCTCGGTGTCATCGTTGGTACAGTATTTAC CGTGATTGTTCAATCATCGTCTGCGACGATTGGAATCTTGCAAGAACTATATGCTGGTGGTTCCATCGATTTAGGTGCTG CTTTACCGGTATTGTTCGGAGATAACATCGGAACAACGATCACAGCGATCTTGGCATCGATTGGTGCATCAGTTGCCGCA CGTCGTGCAGCAGCGGCACACGTCATCTTTAACTTGATTGGTACGACAATCTTTATGATCTTGTTGGTTCCATTCACAAA CTATATCTATTGGATCACAGATCTCTTAGCAATCGAAGATAAGATGCAAATCGCATTCGCACACGGTACGTTTAACGTCG TCAACACATTGATCCAGTTCTGGTTCATCGGAACGATTGCTTGGATTGTGACGAAGTTGGTCCCAGGTGAAGACTCGATC GTCGATACGAAAGCACAACATTTAGATCCGATCTTCATTCAACAGTCGCCTTCGATTGCAGTCGAGCAAGCGAAATATGA AGTCATCCGTATGGGAGATTTCGCAAAACTTGGTCTTGATGAAGCACGCAACTATTTGACGACTGGCGACAAGAAGCACG CTGAAAAGTCGGCACATATCGAAGAAGCATTGAACTCGTTGAATGCGAAGATTACAGATTACCTCGTGAAGTTGGCTGCC GTTGATTTGACGGAACAAGAGTCACAGGAACACAAAACGCTCATGCATGCCATCAACGATATCGAGCGAATCGGTGATCA CGTTGAGAACATCATCGAGTTGATTGATTATAAGACAGCTACGAAAGTGACACTTTCGGCAGATGCACAAAAAGAATTGA CTGAAATGTACGACCTCACACGTGCGACGTTAGAGAAATCTCTTCAGACGTTGGCGAGCGGCGACATGATTGAAGCACGT AAAGTCATTGAAATGGAAGCGAAACTCGACATGCTCGAGCGTCAATTCCGTAAGAACCACGTCGTTCGTTTGAACACAGG TGCTTGTGATGGGCAAGCGGGTATGTTCTTCGTCGATATGCTCTCGAACTTGGAGCGAATCGGTGACCATGCCATGAACA TCACGGAAATCACACTCGAAGATGCAAACGAAGTAACCGTATAA
Upstream 100 bases:
>100_bases TAAACGTGTTTACATGATACTGCCGATGAAGGCATAATGAGTAGGGCATTAAAAACCAAGCAAATCCAACCAATTCTTAA TTAAAAGGAGTACAAAAATC
Downstream 100 bases:
>100_bases CTCAGGAGCACTCCAAATGAAATTTGGGGTGCTTTTTCTTATTTGGCAAGGAATACTCCTTGACACTCTAGGACATATTC AGTATATTATTACTGTATAA
Product: Na/Pi-cotransporter II-related protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 547; Mature: 547
Protein sequence:
>547_residues MEYNLQEMLFMFFGGLGIFLFGIKSMGDGLQKSAGNRLRDILDKYTTNPFLGVLAGIIVTVLIQSSSGTTVITVGLVSAG FMTLRQAIGVIMGANIGTTVTAFIIGFDVGEYALPIIAIGAVLLFFFKKEKLQHLGQIFFGFGMLFYGLELMGSGMKPLR SSEYFIDLTQSMSDNPFLGVIVGTVFTVIVQSSSATIGILQELYAGGSIDLGAALPVLFGDNIGTTITAILASIGASVAA RRAAAAHVIFNLIGTTIFMILLVPFTNYIYWITDLLAIEDKMQIAFAHGTFNVVNTLIQFWFIGTIAWIVTKLVPGEDSI VDTKAQHLDPIFIQQSPSIAVEQAKYEVIRMGDFAKLGLDEARNYLTTGDKKHAEKSAHIEEALNSLNAKITDYLVKLAA VDLTEQESQEHKTLMHAINDIERIGDHVENIIELIDYKTATKVTLSADAQKELTEMYDLTRATLEKSLQTLASGDMIEAR KVIEMEAKLDMLERQFRKNHVVRLNTGACDGQAGMFFVDMLSNLERIGDHAMNITEITLEDANEVTV
Sequences:
>Translated_547_residues MEYNLQEMLFMFFGGLGIFLFGIKSMGDGLQKSAGNRLRDILDKYTTNPFLGVLAGIIVTVLIQSSSGTTVITVGLVSAG FMTLRQAIGVIMGANIGTTVTAFIIGFDVGEYALPIIAIGAVLLFFFKKEKLQHLGQIFFGFGMLFYGLELMGSGMKPLR SSEYFIDLTQSMSDNPFLGVIVGTVFTVIVQSSSATIGILQELYAGGSIDLGAALPVLFGDNIGTTITAILASIGASVAA RRAAAAHVIFNLIGTTIFMILLVPFTNYIYWITDLLAIEDKMQIAFAHGTFNVVNTLIQFWFIGTIAWIVTKLVPGEDSI VDTKAQHLDPIFIQQSPSIAVEQAKYEVIRMGDFAKLGLDEARNYLTTGDKKHAEKSAHIEEALNSLNAKITDYLVKLAA VDLTEQESQEHKTLMHAINDIERIGDHVENIIELIDYKTATKVTLSADAQKELTEMYDLTRATLEKSLQTLASGDMIEAR KVIEMEAKLDMLERQFRKNHVVRLNTGACDGQAGMFFVDMLSNLERIGDHAMNITEITLEDANEVTV >Mature_547_residues MEYNLQEMLFMFFGGLGIFLFGIKSMGDGLQKSAGNRLRDILDKYTTNPFLGVLAGIIVTVLIQSSSGTTVITVGLVSAG FMTLRQAIGVIMGANIGTTVTAFIIGFDVGEYALPIIAIGAVLLFFFKKEKLQHLGQIFFGFGMLFYGLELMGSGMKPLR SSEYFIDLTQSMSDNPFLGVIVGTVFTVIVQSSSATIGILQELYAGGSIDLGAALPVLFGDNIGTTITAILASIGASVAA RRAAAAHVIFNLIGTTIFMILLVPFTNYIYWITDLLAIEDKMQIAFAHGTFNVVNTLIQFWFIGTIAWIVTKLVPGEDSI VDTKAQHLDPIFIQQSPSIAVEQAKYEVIRMGDFAKLGLDEARNYLTTGDKKHAEKSAHIEEALNSLNAKITDYLVKLAA VDLTEQESQEHKTLMHAINDIERIGDHVENIIELIDYKTATKVTLSADAQKELTEMYDLTRATLEKSLQTLASGDMIEAR KVIEMEAKLDMLERQFRKNHVVRLNTGACDGQAGMFFVDMLSNLERIGDHAMNITEITLEDANEVTV
Specific function: Unknown
COG id: COG1283
COG function: function code P; Na+/phosphate symporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis yqeW [H]
Homologues:
Organism=Escherichia coli, GI1790451, Length=540, Percent_Identity=25.3703703703704, Blast_Score=178, Evalue=7e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003841 - InterPro: IPR004633 [H]
Pfam domain/function: PF02690 Na_Pi_cotrans [H]
EC number: NA
Molecular weight: Translated: 59925; Mature: 59925
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYNLQEMLFMFFGGLGIFLFGIKSMGDGLQKSAGNRLRDILDKYTTNPFLGVLAGIIVT CCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH VLIQSSSGTTVITVGLVSAGFMTLRQAIGVIMGANIGTTVTAFIIGFDVGEYALPIIAIG HHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHH AVLLFFFKKEKLQHLGQIFFGFGMLFYGLELMGSGMKPLRSSEYFIDLTQSMSDNPFLGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHCCCCCCHHHH IVGTVFTVIVQSSSATIGILQELYAGGSIDLGAALPVLFGDNIGTTITAILASIGASVAA HHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHH RRAAAAHVIFNLIGTTIFMILLVPFTNYIYWITDLLAIEDKMQIAFAHGTFNVVNTLIQF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHH WFIGTIAWIVTKLVPGEDSIVDTKAQHLDPIFIQQSPSIAVEQAKYEVIRMGDFAKLGLD HHHHHHHHHHHHHCCCCCCCCCCHHHHCCCEEEECCCCHHHHHHHHHHHCCCCHHHHCHH EARNYLTTGDKKHAEKSAHIEEALNSLNAKITDYLVKLAAVDLTEQESQEHKTLMHAIND HHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH IERIGDHVENIIELIDYKTATKVTLSADAQKELTEMYDLTRATLEKSLQTLASGDMIEAR HHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH KVIEMEAKLDMLERQFRKNHVVRLNTGACDGQAGMFFVDMLSNLERIGDHAMNITEITLE HHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEC DANEVTV CCCCCCC >Mature Secondary Structure MEYNLQEMLFMFFGGLGIFLFGIKSMGDGLQKSAGNRLRDILDKYTTNPFLGVLAGIIVT CCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH VLIQSSSGTTVITVGLVSAGFMTLRQAIGVIMGANIGTTVTAFIIGFDVGEYALPIIAIG HHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHH AVLLFFFKKEKLQHLGQIFFGFGMLFYGLELMGSGMKPLRSSEYFIDLTQSMSDNPFLGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHCCCCCCHHHH IVGTVFTVIVQSSSATIGILQELYAGGSIDLGAALPVLFGDNIGTTITAILASIGASVAA HHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHH RRAAAAHVIFNLIGTTIFMILLVPFTNYIYWITDLLAIEDKMQIAFAHGTFNVVNTLIQF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHH WFIGTIAWIVTKLVPGEDSIVDTKAQHLDPIFIQQSPSIAVEQAKYEVIRMGDFAKLGLD HHHHHHHHHHHHHCCCCCCCCCCHHHHCCCEEEECCCCHHHHHHHHHHHCCCCHHHHCHH EARNYLTTGDKKHAEKSAHIEEALNSLNAKITDYLVKLAAVDLTEQESQEHKTLMHAIND HHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH IERIGDHVENIIELIDYKTATKVTLSADAQKELTEMYDLTRATLEKSLQTLASGDMIEAR HHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH KVIEMEAKLDMLERQFRKNHVVRLNTGACDGQAGMFFVDMLSNLERIGDHAMNITEITLE HHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEC DANEVTV CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]