| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229916289
Identifier: 229916289
GI number: 229916289
Start: 504359
End: 506560
Strand: Reverse
Name: 229916289
Synonym: EAT1b_0558
Alternate gene names: NA
Gene position: 506560-504359 (Counterclockwise)
Preceding gene: 229916290
Following gene: 229916288
Centisome position: 16.89
GC content: 46.96
Gene sequence:
>2202_bases ATGAAACCTGGGTACTTTTCACTCGTCCTTCATGCTCATTTACCGTACGTTAGGCATGAAGAGAAACACCGATTAGAAGA AAGATGGGTTTACGAGGCCATCTCTGAGACATATATCCCGATTCTTTGGCAAGTCGATCGCTTGAAGCGTCCCTTACATT GGACGGTTAGTATTTCCCCGCCTGTCGTTGAAATGCTTGCCGATCCACTCATTCAGGATCGCTACGTAGAACACTTGGAT GACATGCTCGAATTGATTGCCCTCGAACTATCTGAGGACCGAACAGACGAAGAAAAAGCGACGTTACATTTTTATCGTCA GCGATACCACGATTTAAAAAATACGTTCCTTCATTGGAATAAAAATTTGAACGAGGCGTTCCGTACATATCGTGAGGCAG GTTATATTGACATGGTGACATGTACGGCGACCCATGGCTTTAATCCACACCTCTTCACGGAACAGGCGGCACGTGCTGAG ATTCGGACGGGCTTGAACTGTTTCGAACGTCACTATGGGTTCCGTCCAACAGGCATATGGTTACCAGAGTGTGCTTATAC ACCAGGGGTCGACCGGATTCTTTATGAAGAGGGAATTCGCTACACCTTTGTCGATGAACATGCTCTTCTTGATGCAGATC CGACACCTGAGAAAGGGATTGGAGCCCCTGTGTATTCACCACATGGGGTCGCGTTATTCCCGCGGGATCAAATCATCTCA GGTAAAATCTGGAGTTCGATGATCGGATATCCGGGTCATCCGGATTATCGTGAATTTTACCGTGATTTGGCTTACGACCG GGATTGGGATTATATCCAATCCTTCATGCATCCGGAAGGGATCCGTTTTGATACGGGTCTCAAAATGCATCGGATTACGG GGGACACGGATCAAAAAGACTTCTATGTGCGTGAATGGGCGGAACATCAAATTGAGAACCATGCGACCGATTTCGCCAAA ACGTTAGAATCACACCTTGAAGCGCACGGTGCTCAAACATTCCCGCCATTTTTAGTGACAGCCCCGTTCGATGCGGAATT GTTCGGTCACTGGTGGTTCGAGGGACCGGAGTTCCTTGGGAAAGTAGCAGAACGACTTGCTGAATTTGGGATTGAAACCA TCACGCCAGCCCTCTTCCTTGAACGTCATTTTAAGGATTTACAGACGGTTCACGTGTCGATGAATACATGGGGACGCAAG GGTTATGGTGAAGTTTGGATCAACGAGAGAAATGAGTGGATGCTTCGTCATTTGCACATGATGGAGATGCAACTTGTGAA AGATGTGGCGGACTATCGGAATCAATCGGAATTGACAAATCGTGCTTTGAAACAATTGATCCGTCATTATGTACTGGCTG TGTCGAGTGACTGGGCCTTCATCTTGGACGGACAAACGACGGCACAGTATGCCGCCGAACGGTTCCGTGAACATACAAGA CTCTTTGCAGAACTGGAAACGGCACTCTATCAGGATGGAGTATCCGAACAGTTGCTACATGATCATTACGCTGCATATCC ATTTCTTCAGGATGAAGACATCGATATTGATTCGTTCCTATCTCCTCACGATTACTATGTGACAACCGAGCGGGAAGAGG AAAAACCAGCCGTTTTGGTGCTCACGCCTGAATATCACGGTCATATCGTAGGGGGACTCGGAAGACGGGTCGTCGACGAA ATCGAGGCGAGAGCGGACGATGGCGAAGTCGTCTATGTATTAACGCCATATCATGACGAGTTGCCTGAGTATGAGCGACA AGGAAACATACATGTGTATCGTGTTCGTACAACTAGTCCATTTTTAGAGCATGTCATGAACCAGGTGGCAACACAAAATA TCGCCTATGTAAAACTGGTTCATGAACTTTCGAAACGTGTCTCCTTCAAAGTGGTTCACCACTTCGATTGGATGACGATT CCTGCGGCAAGAGAACTTGCGCAATCCCTTGCGCTTCCGTTATACTCAACTATGTTGTCCTTTGAAGCGACTCGCAATCC GCATGGTCACGGTGGTTTATTCGATGCAATCCATCGAATCGAAAACAGCGTGTTTCCTGCATCAGAACGCGTATATGTCG GGGAAGAGATCTCGATTCACGACCTAAAACAATGGTATAAGGTGAGCGAGAACGTCAACACATGCCTACCTATAGAGACT TCTCCATATGGACAGGAATCAATGAAAAAGAACGTGAAATAA
Upstream 100 bases:
>100_bases CCGACGTTGGCAATATGGGGAAGTCGATTCTCCAGAATTACTCGATACATTACCAAAATATGCAGCATACCGACTCGTGC GTTAAGGAGGACTTTTTATT
Downstream 100 bases:
>100_bases CCTTGCTTTTTCATAAGAAACTTGGTAGGATAATTGAGTATGCTTAGACTGTAAAGCAAAAGCACTTGATACAACATCAT TAAGATGGGAGTGAAAGAAA
Product: glycoside hydrolase family 57
Products: NA
Alternate protein names: Glycoside Hydrolase Family Protein; Glycosyl Hydrolase Family; Glycosy Hydrolase Family Protein; Alpha-Amylase; (1-_4)-Alpha-D-Glucan Branching; Family; Glycogen Branching; Glycosyl Transferase/Glycoside Hydrolase-Like Protein; Glycosyl Hydrolase Family Protein; Glycosyl Transferase Domain-Containing Protein
Number of amino acids: Translated: 733; Mature: 733
Protein sequence:
>733_residues MKPGYFSLVLHAHLPYVRHEEKHRLEERWVYEAISETYIPILWQVDRLKRPLHWTVSISPPVVEMLADPLIQDRYVEHLD DMLELIALELSEDRTDEEKATLHFYRQRYHDLKNTFLHWNKNLNEAFRTYREAGYIDMVTCTATHGFNPHLFTEQAARAE IRTGLNCFERHYGFRPTGIWLPECAYTPGVDRILYEEGIRYTFVDEHALLDADPTPEKGIGAPVYSPHGVALFPRDQIIS GKIWSSMIGYPGHPDYREFYRDLAYDRDWDYIQSFMHPEGIRFDTGLKMHRITGDTDQKDFYVREWAEHQIENHATDFAK TLESHLEAHGAQTFPPFLVTAPFDAELFGHWWFEGPEFLGKVAERLAEFGIETITPALFLERHFKDLQTVHVSMNTWGRK GYGEVWINERNEWMLRHLHMMEMQLVKDVADYRNQSELTNRALKQLIRHYVLAVSSDWAFILDGQTTAQYAAERFREHTR LFAELETALYQDGVSEQLLHDHYAAYPFLQDEDIDIDSFLSPHDYYVTTEREEEKPAVLVLTPEYHGHIVGGLGRRVVDE IEARADDGEVVYVLTPYHDELPEYERQGNIHVYRVRTTSPFLEHVMNQVATQNIAYVKLVHELSKRVSFKVVHHFDWMTI PAARELAQSLALPLYSTMLSFEATRNPHGHGGLFDAIHRIENSVFPASERVYVGEEISIHDLKQWYKVSENVNTCLPIET SPYGQESMKKNVK
Sequences:
>Translated_733_residues MKPGYFSLVLHAHLPYVRHEEKHRLEERWVYEAISETYIPILWQVDRLKRPLHWTVSISPPVVEMLADPLIQDRYVEHLD DMLELIALELSEDRTDEEKATLHFYRQRYHDLKNTFLHWNKNLNEAFRTYREAGYIDMVTCTATHGFNPHLFTEQAARAE IRTGLNCFERHYGFRPTGIWLPECAYTPGVDRILYEEGIRYTFVDEHALLDADPTPEKGIGAPVYSPHGVALFPRDQIIS GKIWSSMIGYPGHPDYREFYRDLAYDRDWDYIQSFMHPEGIRFDTGLKMHRITGDTDQKDFYVREWAEHQIENHATDFAK TLESHLEAHGAQTFPPFLVTAPFDAELFGHWWFEGPEFLGKVAERLAEFGIETITPALFLERHFKDLQTVHVSMNTWGRK GYGEVWINERNEWMLRHLHMMEMQLVKDVADYRNQSELTNRALKQLIRHYVLAVSSDWAFILDGQTTAQYAAERFREHTR LFAELETALYQDGVSEQLLHDHYAAYPFLQDEDIDIDSFLSPHDYYVTTEREEEKPAVLVLTPEYHGHIVGGLGRRVVDE IEARADDGEVVYVLTPYHDELPEYERQGNIHVYRVRTTSPFLEHVMNQVATQNIAYVKLVHELSKRVSFKVVHHFDWMTI PAARELAQSLALPLYSTMLSFEATRNPHGHGGLFDAIHRIENSVFPASERVYVGEEISIHDLKQWYKVSENVNTCLPIET SPYGQESMKKNVK >Mature_733_residues MKPGYFSLVLHAHLPYVRHEEKHRLEERWVYEAISETYIPILWQVDRLKRPLHWTVSISPPVVEMLADPLIQDRYVEHLD DMLELIALELSEDRTDEEKATLHFYRQRYHDLKNTFLHWNKNLNEAFRTYREAGYIDMVTCTATHGFNPHLFTEQAARAE IRTGLNCFERHYGFRPTGIWLPECAYTPGVDRILYEEGIRYTFVDEHALLDADPTPEKGIGAPVYSPHGVALFPRDQIIS GKIWSSMIGYPGHPDYREFYRDLAYDRDWDYIQSFMHPEGIRFDTGLKMHRITGDTDQKDFYVREWAEHQIENHATDFAK TLESHLEAHGAQTFPPFLVTAPFDAELFGHWWFEGPEFLGKVAERLAEFGIETITPALFLERHFKDLQTVHVSMNTWGRK GYGEVWINERNEWMLRHLHMMEMQLVKDVADYRNQSELTNRALKQLIRHYVLAVSSDWAFILDGQTTAQYAAERFREHTR LFAELETALYQDGVSEQLLHDHYAAYPFLQDEDIDIDSFLSPHDYYVTTEREEEKPAVLVLTPEYHGHIVGGLGRRVVDE IEARADDGEVVYVLTPYHDELPEYERQGNIHVYRVRTTSPFLEHVMNQVATQNIAYVKLVHELSKRVSFKVVHHFDWMTI PAARELAQSLALPLYSTMLSFEATRNPHGHGGLFDAIHRIENSVFPASERVYVGEEISIHDLKQWYKVSENVNTCLPIET SPYGQESMKKNVK
Specific function: Unknown
COG id: COG1543
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 85728; Mature: 85728
Theoretical pI: Translated: 5.55; Mature: 5.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPGYFSLVLHAHLPYVRHEEKHRLEERWVYEAISETYIPILWQVDRLKRPLHWTVSISP CCCCCEEEHHHHHCCHHHCHHHHHHHHHHHHHHHHHCHHHHEEEHHHHCCCEEEEEECCH PVVEMLADPLIQDRYVEHLDDMLELIALELSEDRTDEEKATLHFYRQRYHDLKNTFLHWN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC KNLNEAFRTYREAGYIDMVTCTATHGFNPHLFTEQAARAEIRTGLNCFERHYGFRPTGIW CCHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC LPECAYTPGVDRILYEEGIRYTFVDEHALLDADPTPEKGIGAPVYSPHGVALFPRDQIIS CCCCCCCCCHHHHHHHCCCEEEEECCCEEECCCCCCCCCCCCCCCCCCCEEECCCCCHHC GKIWSSMIGYPGHPDYREFYRDLAYDRDWDYIQSFMHPEGIRFDTGLKMHRITGDTDQKD CHHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHHHHHCCCCCEECCCCEEEEECCCCCCCH FYVREWAEHQIENHATDFAKTLESHLEAHGAQTFPPFLVTAPFDAELFGHWWFEGPEFLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHCCCCHHHHH KVAERLAEFGIETITPALFLERHFKDLQTVHVSMNTWGRKGYGEVWINERNEWMLRHLHM HHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCEEECCCHHHHHHHHHH MEMQLVKDVADYRNQSELTNRALKQLIRHYVLAVSSDWAFILDGQTTAQYAAERFREHTR HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEECCCCEEEECCCHHHHHHHHHHHHHHH LFAELETALYQDGVSEQLLHDHYAAYPFLQDEDIDIDSFLSPHDYYVTTEREEEKPAVLV HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCEEEECCCCCCCCEEEE LTPEYHGHIVGGLGRRVVDEIEARADDGEVVYVLTPYHDELPEYERQGNIHVYRVRTTSP ECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCHHCCCCHHHCCCEEEEEEECCCH FLEHVMNQVATQNIAYVKLVHELSKRVSFKVVHHFDWMTIPAARELAQSLALPLYSTMLS HHHHHHHHHHHCCHHHHHHHHHHHHHHEEEEEECCCCEECHHHHHHHHHHHHHHHHHHHH FEATRNPHGHGGLFDAIHRIENSVFPASERVYVGEEISIHDLKQWYKVSENVNTCLPIET HHHCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCEEEECCC SPYGQESMKKNVK CCCCHHHHHCCCC >Mature Secondary Structure MKPGYFSLVLHAHLPYVRHEEKHRLEERWVYEAISETYIPILWQVDRLKRPLHWTVSISP CCCCCEEEHHHHHCCHHHCHHHHHHHHHHHHHHHHHCHHHHEEEHHHHCCCEEEEEECCH PVVEMLADPLIQDRYVEHLDDMLELIALELSEDRTDEEKATLHFYRQRYHDLKNTFLHWN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC KNLNEAFRTYREAGYIDMVTCTATHGFNPHLFTEQAARAEIRTGLNCFERHYGFRPTGIW CCHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC LPECAYTPGVDRILYEEGIRYTFVDEHALLDADPTPEKGIGAPVYSPHGVALFPRDQIIS CCCCCCCCCHHHHHHHCCCEEEEECCCEEECCCCCCCCCCCCCCCCCCCEEECCCCCHHC GKIWSSMIGYPGHPDYREFYRDLAYDRDWDYIQSFMHPEGIRFDTGLKMHRITGDTDQKD CHHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHHHHHCCCCCEECCCCEEEEECCCCCCCH FYVREWAEHQIENHATDFAKTLESHLEAHGAQTFPPFLVTAPFDAELFGHWWFEGPEFLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHCCCCHHHHH KVAERLAEFGIETITPALFLERHFKDLQTVHVSMNTWGRKGYGEVWINERNEWMLRHLHM HHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCEEECCCHHHHHHHHHH MEMQLVKDVADYRNQSELTNRALKQLIRHYVLAVSSDWAFILDGQTTAQYAAERFREHTR HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEECCCCEEEECCCHHHHHHHHHHHHHHH LFAELETALYQDGVSEQLLHDHYAAYPFLQDEDIDIDSFLSPHDYYVTTEREEEKPAVLV HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCEEEECCCCCCCCEEEE LTPEYHGHIVGGLGRRVVDEIEARADDGEVVYVLTPYHDELPEYERQGNIHVYRVRTTSP ECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCHHCCCCHHHCCCEEEEEEECCCH FLEHVMNQVATQNIAYVKLVHELSKRVSFKVVHHFDWMTIPAARELAQSLALPLYSTMLS HHHHHHHHHHHCCHHHHHHHHHHHHHHEEEEEECCCCEECHHHHHHHHHHHHHHHHHHHH FEATRNPHGHGGLFDAIHRIENSVFPASERVYVGEEISIHDLKQWYKVSENVNTCLPIET HHHCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCEEEECCC SPYGQESMKKNVK CCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA