| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229916290
Identifier: 229916290
GI number: 229916290
Start: 506576
End: 507325
Strand: Reverse
Name: 229916290
Synonym: EAT1b_0559
Alternate gene names: NA
Gene position: 507325-506576 (Counterclockwise)
Preceding gene: 229916291
Following gene: 229916289
Centisome position: 16.91
GC content: 49.6
Gene sequence:
>750_bases ATGGAAGAGAAAATCGTGTCCTTGAAACAACAAGGTCTTACGTTAAAACAGATTGCGGCAGAATTAGACGTCCCGATTGG CAAAGTCCAATACGCATGGCGGAAATGGAGAAATCAGCAACAGGAAGTGGAGGCGGTTGCCCCTGTGAAACAAAAGCGTG AAACGAAGAAAGCAAAGACGTCGGTGACGACCTCACGCAAACAAGTGGCATTGGCGAAAGAGACGGCCAACGTGTCGACT TCTCCACTTCTCGAAAAGGGTCCGGAGGGATATTGGAAGCTACCCGATCGGTACAACGTGGACTTCATGCATGCGGTCGT ACAGTCTCCAAACGCAGTGTATGTATGCTGGGAAGTATCTGATCTCGTAAAAGAGACGTTAGCGCTTCAATTCATGCGAC GCTGGGAAGATCTGCCGAAGGCGTTCCGCATCCTTGATGTTACATTACTTGATTACAATAGCGGTCACGCAAACCGATCG TATACGTTCGATCTTCCCGAGATGACGAACAGCTGGTTCGTTCGCCCTCTCGACCCGAATACGACATATGTGTTTGAATT TGGGATTCGGACGATGGAAGGAGAGTTTCTCCCAATTGTCGCCTCAAATCCGCTTGACACGCCAAGAGCAGAACCCGCAG GAGTCGGGCGATTCGCAGAACCGGTCCGACGTTGGCAATATGGGGAAGTCGATTCTCCAGAATTACTCGATACATTACCA AAATATGCAGCATACCGACTCGTGCGTTAA
Upstream 100 bases:
>100_bases ACAACAGTGCTGTTGTTCTTTATTTTTTTGGGCAGGAATACAAACTCAAGGAGCGAATAATAGTCTACATGGATTTTTAC ATGAAGGGAGCCATATAGAG
Downstream 100 bases:
>100_bases GGAGGACTTTTTATTATGAAACCTGGGTACTTTTCACTCGTCCTTCATGCTCATTTACCGTACGTTAGGCATGAAGAGAA ACACCGATTAGAAGAAAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MEEKIVSLKQQGLTLKQIAAELDVPIGKVQYAWRKWRNQQQEVEAVAPVKQKRETKKAKTSVTTSRKQVALAKETANVST SPLLEKGPEGYWKLPDRYNVDFMHAVVQSPNAVYVCWEVSDLVKETLALQFMRRWEDLPKAFRILDVTLLDYNSGHANRS YTFDLPEMTNSWFVRPLDPNTTYVFEFGIRTMEGEFLPIVASNPLDTPRAEPAGVGRFAEPVRRWQYGEVDSPELLDTLP KYAAYRLVR
Sequences:
>Translated_249_residues MEEKIVSLKQQGLTLKQIAAELDVPIGKVQYAWRKWRNQQQEVEAVAPVKQKRETKKAKTSVTTSRKQVALAKETANVST SPLLEKGPEGYWKLPDRYNVDFMHAVVQSPNAVYVCWEVSDLVKETLALQFMRRWEDLPKAFRILDVTLLDYNSGHANRS YTFDLPEMTNSWFVRPLDPNTTYVFEFGIRTMEGEFLPIVASNPLDTPRAEPAGVGRFAEPVRRWQYGEVDSPELLDTLP KYAAYRLVR >Mature_249_residues MEEKIVSLKQQGLTLKQIAAELDVPIGKVQYAWRKWRNQQQEVEAVAPVKQKRETKKAKTSVTTSRKQVALAKETANVST SPLLEKGPEGYWKLPDRYNVDFMHAVVQSPNAVYVCWEVSDLVKETLALQFMRRWEDLPKAFRILDVTLLDYNSGHANRS YTFDLPEMTNSWFVRPLDPNTTYVFEFGIRTMEGEFLPIVASNPLDTPRAEPAGVGRFAEPVRRWQYGEVDSPELLDTLP KYAAYRLVR
Specific function: Unknown
COG id: COG3330
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28640; Mature: 28640
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEEKIVSLKQQGLTLKQIAAELDVPIGKVQYAWRKWRNQQQEVEAVAPVKQKRETKKAKT CCCHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH SVTTSRKQVALAKETANVSTSPLLEKGPEGYWKLPDRYNVDFMHAVVQSPNAVYVCWEVS HHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCEECCCCCCHHHHHHHHCCCCEEEEEEEHH DLVKETLALQFMRRWEDLPKAFRILDVTLLDYNSGHANRSYTFDLPEMTNSWFVRPLDPN HHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCEEEEECCCCCCCEEEEECCCC TTYVFEFGIRTMEGEFLPIVASNPLDTPRAEPAGVGRFAEPVRRWQYGEVDSPELLDTLP CEEEEEECCEEECCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHH KYAAYRLVR HHHHHHCCC >Mature Secondary Structure MEEKIVSLKQQGLTLKQIAAELDVPIGKVQYAWRKWRNQQQEVEAVAPVKQKRETKKAKT CCCHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH SVTTSRKQVALAKETANVSTSPLLEKGPEGYWKLPDRYNVDFMHAVVQSPNAVYVCWEVS HHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCEECCCCCCHHHHHHHHCCCCEEEEEEEHH DLVKETLALQFMRRWEDLPKAFRILDVTLLDYNSGHANRSYTFDLPEMTNSWFVRPLDPN HHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCEEEEECCCCCCCEEEEECCCC TTYVFEFGIRTMEGEFLPIVASNPLDTPRAEPAGVGRFAEPVRRWQYGEVDSPELLDTLP CEEEEEECCEEECCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHH KYAAYRLVR HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA