Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

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The map label for this gene is yqhQ [H]

Identifier: 229916260

GI number: 229916260

Start: 482566

End: 483507

Strand: Direct

Name: yqhQ [H]

Synonym: EAT1b_0529

Alternate gene names: 229916260

Gene position: 482566-483507 (Clockwise)

Preceding gene: 229916244

Following gene: 229916261

Centisome position: 16.09

GC content: 48.41

Gene sequence:

>942_bases
ATGAATTCTAAACCAACCATCCCAGTCGGGGGACAGGCGCTCGTGGAAGGCGTCATGTTTCAAGGCCGCTCTGAAAGCGC
ATCTGCCATCCGGCGAAAAGATGGCTCGATCGAAACATTCGAGCAAGCGCGCATTCTTGTCCCTTGGGTCCAATCGTTAA
AAAAAGTACCGTTCTTAAGAGGGATTGTCGCGCTTTACGAATCGTTAAAGAACGGTTCTGCACATATGAACTTTGCGAGC
GATCGATACGATGTCGACCCGAGTGAAGATACGAACACGAGCGAAGACCAAAAACAGAGCATCTGGATGATTGCCTTCAT
CGCAATCGTCGGTGTCATCTCATACGTGTTTGGTAAATTGATTTTCAATGTGACGCCCGCACTGCTCGCGGCTATGTTTC
AAGACGTGCCTTTATTTTCCGGACATGTGATTCAAAACCTCCTTGAAGGGGGAATAAAATTAGTATTGTTACTCAGCTAC
CTTTACTTGATATCATTGACGCCACTGATCAAGCGCGTCTTCCAATATCACGGCGCTGAGCATAAAGTCATCAATTGCTA
TGAGTCCGGTCGTCCGGTCACGGTTGAACAAGTACGCCAAAGCTCGCGATTGCATTATCGCTGTGGCTCGAGCTTCATTT
TATTCACCGTCTTCGTCGGGATTGGCGTTTACATGATTGTGCCAATCGACCCGCTCTGGTTGCGACTCGTCAGCCGAATC
GCGCTATTGCCGGTCGTCATCGGAATCTCATTTGAAGTCCTTCAGTTTACCAATCGTTTCCGCGACCATCGCTTTCTGTC
AATCCTCGGCAAACCGGGCCTGTCGCTCCAATTATTGACGACACGAGAGCCGAATGATGAGCAGATTCAAGTCGCGATTG
AAGCATTTGAGACATGGGAACGAAAAGAGTTAGGAGAATCGGTCATTCATAGAGAGGGATAA

Upstream 100 bases:

>100_bases
AATTTATCGAAAGAACGTGAATCGAGCCTTCTGCCCTTTCGTTTTTTTTACAAATCACGGTATAATTCAAGTACAACATT
TGAAGAATCGAGGAAAGTGA

Downstream 100 bases:

>100_bases
GAGGAGGAAGCACCATGATCAGACAAAGAGTCGGTTCGATCGCTGCAACAATCGTGTTTATCCTTGGCTTCATCGGGGTC
GGGCATATGCTTGCCACCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MNSKPTIPVGGQALVEGVMFQGRSESASAIRRKDGSIETFEQARILVPWVQSLKKVPFLRGIVALYESLKNGSAHMNFAS
DRYDVDPSEDTNTSEDQKQSIWMIAFIAIVGVISYVFGKLIFNVTPALLAAMFQDVPLFSGHVIQNLLEGGIKLVLLLSY
LYLISLTPLIKRVFQYHGAEHKVINCYESGRPVTVEQVRQSSRLHYRCGSSFILFTVFVGIGVYMIVPIDPLWLRLVSRI
ALLPVVIGISFEVLQFTNRFRDHRFLSILGKPGLSLQLLTTREPNDEQIQVAIEAFETWERKELGESVIHREG

Sequences:

>Translated_313_residues
MNSKPTIPVGGQALVEGVMFQGRSESASAIRRKDGSIETFEQARILVPWVQSLKKVPFLRGIVALYESLKNGSAHMNFAS
DRYDVDPSEDTNTSEDQKQSIWMIAFIAIVGVISYVFGKLIFNVTPALLAAMFQDVPLFSGHVIQNLLEGGIKLVLLLSY
LYLISLTPLIKRVFQYHGAEHKVINCYESGRPVTVEQVRQSSRLHYRCGSSFILFTVFVGIGVYMIVPIDPLWLRLVSRI
ALLPVVIGISFEVLQFTNRFRDHRFLSILGKPGLSLQLLTTREPNDEQIQVAIEAFETWERKELGESVIHREG
>Mature_313_residues
MNSKPTIPVGGQALVEGVMFQGRSESASAIRRKDGSIETFEQARILVPWVQSLKKVPFLRGIVALYESLKNGSAHMNFAS
DRYDVDPSEDTNTSEDQKQSIWMIAFIAIVGVISYVFGKLIFNVTPALLAAMFQDVPLFSGHVIQNLLEGGIKLVLLLSY
LYLISLTPLIKRVFQYHGAEHKVINCYESGRPVTVEQVRQSSRLHYRCGSSFILFTVFVGIGVYMIVPIDPLWLRLVSRI
ALLPVVIGISFEVLQFTNRFRDHRFLSILGKPGLSLQLLTTREPNDEQIQVAIEAFETWERKELGESVIHREG

Specific function: Unknown

COG id: COG3872

COG function: function code R; Predicted metal-dependent enzyme

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010787
- ProDom:   PD131510 [H]

Pfam domain/function: PF07136 DUF1385 [H]

EC number: NA

Molecular weight: Translated: 35242; Mature: 35242

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSKPTIPVGGQALVEGVMFQGRSESASAIRRKDGSIETFEQARILVPWVQSLKKVPFLR
CCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCHHHH
GIVALYESLKNGSAHMNFASDRYDVDPSEDTNTSEDQKQSIWMIAFIAIVGVISYVFGKL
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IFNVTPALLAAMFQDVPLFSGHVIQNLLEGGIKLVLLLSYLYLISLTPLIKRVFQYHGAE
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
HKVINCYESGRPVTVEQVRQSSRLHYRCGSSFILFTVFVGIGVYMIVPIDPLWLRLVSRI
CCEEEHHHCCCCEEHHHHHHHCCEEECCCCHHHHHHHHHHHHEEEEECCCHHHHHHHHHH
ALLPVVIGISFEVLQFTNRFRDHRFLSILGKPGLSLQLLTTREPNDEQIQVAIEAFETWE
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHH
RKELGESVIHREG
HHHHHHHHHCCCC
>Mature Secondary Structure
MNSKPTIPVGGQALVEGVMFQGRSESASAIRRKDGSIETFEQARILVPWVQSLKKVPFLR
CCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCHHHH
GIVALYESLKNGSAHMNFASDRYDVDPSEDTNTSEDQKQSIWMIAFIAIVGVISYVFGKL
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IFNVTPALLAAMFQDVPLFSGHVIQNLLEGGIKLVLLLSYLYLISLTPLIKRVFQYHGAE
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
HKVINCYESGRPVTVEQVRQSSRLHYRCGSSFILFTVFVGIGVYMIVPIDPLWLRLVSRI
CCEEEHHHCCCCEEHHHHHHHCCEEECCCCHHHHHHHHHHHHEEEEECCCHHHHHHHHHH
ALLPVVIGISFEVLQFTNRFRDHRFLSILGKPGLSLQLLTTREPNDEQIQVAIEAFETWE
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHH
RKELGESVIHREG
HHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]