| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229916261
Identifier: 229916261
GI number: 229916261
Start: 483522
End: 483932
Strand: Direct
Name: 229916261
Synonym: EAT1b_0530
Alternate gene names: NA
Gene position: 483522-483932 (Clockwise)
Preceding gene: 229916260
Following gene: 229916264
Centisome position: 16.12
GC content: 45.99
Gene sequence:
>411_bases ATGATCAGACAAAGAGTCGGTTCGATCGCTGCAACAATCGTGTTTATCCTTGGCTTCATCGGGGTCGGGCATATGCTTGC CACCGATCCGGGTCGCCTGTTTAGACAATTGTTGTTCATCGGGATATTCGGGTTAGTCTTTTATGTGATCTATCGCGTCT TCATGGCACCACGTATGTCTGCAGAAGATGCACGCTATCGTAAAACCGCGCAAGCCTCAAAAAAACGAATGCAGGGAAGT CGTGGTCCTCAAGTCAAACCTTCCGCTTCCGCTAAAAACCGGAAAGCGAAGAAACCTGGTTCGAACGTCACCAAGTTATC TAAACGTTCAACCGTACATCGTAGCAATCCTCCACACTTAACAGTGATTGAAGGAAAAAAAGGCAAGAAGAAAAAGAAAG CAAACATGTAA
Upstream 100 bases:
>100_bases ATGAGCAGATTCAAGTCGCGATTGAAGCATTTGAGACATGGGAACGAAAAGAGTTAGGAGAATCGGTCATTCATAGAGAG GGATAAGAGGAGGAAGCACC
Downstream 100 bases:
>100_bases AAGGAGCGCCGCGGCGCTCCTTTTTATGTCGTCTCTACATATCCGATATATGGAAGATTCCGATATTGCTCCGCATAATC GATCCCATATCCGATGACAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MIRQRVGSIAATIVFILGFIGVGHMLATDPGRLFRQLLFIGIFGLVFYVIYRVFMAPRMSAEDARYRKTAQASKKRMQGS RGPQVKPSASAKNRKAKKPGSNVTKLSKRSTVHRSNPPHLTVIEGKKGKKKKKANM
Sequences:
>Translated_136_residues MIRQRVGSIAATIVFILGFIGVGHMLATDPGRLFRQLLFIGIFGLVFYVIYRVFMAPRMSAEDARYRKTAQASKKRMQGS RGPQVKPSASAKNRKAKKPGSNVTKLSKRSTVHRSNPPHLTVIEGKKGKKKKKANM >Mature_136_residues MIRQRVGSIAATIVFILGFIGVGHMLATDPGRLFRQLLFIGIFGLVFYVIYRVFMAPRMSAEDARYRKTAQASKKRMQGS RGPQVKPSASAKNRKAKKPGSNVTKLSKRSTVHRSNPPHLTVIEGKKGKKKKKANM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15141; Mature: 15141
Theoretical pI: Translated: 12.36; Mature: 12.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRQRVGSIAATIVFILGFIGVGHMLATDPGRLFRQLLFIGIFGLVFYVIYRVFMAPRMS CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC AEDARYRKTAQASKKRMQGSRGPQVKPSASAKNRKAKKPGSNVTKLSKRSTVHRSNPPHL CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEE TVIEGKKGKKKKKANM EEEECCCCCCCCCCCC >Mature Secondary Structure MIRQRVGSIAATIVFILGFIGVGHMLATDPGRLFRQLLFIGIFGLVFYVIYRVFMAPRMS CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC AEDARYRKTAQASKKRMQGSRGPQVKPSASAKNRKAKKPGSNVTKLSKRSTVHRSNPPHL CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEE TVIEGKKGKKKKKANM EEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA