| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is yhjX [C]
Identifier: 229916185
GI number: 229916185
Start: 416007
End: 417161
Strand: Direct
Name: yhjX [C]
Synonym: EAT1b_0454
Alternate gene names: 229916185
Gene position: 416007-417161 (Clockwise)
Preceding gene: 229916184
Following gene: 229916186
Centisome position: 13.87
GC content: 49.7
Gene sequence:
>1155_bases ATGACGATTGTATTATTGGCCGTGATCTATCTCGCGTTTATCAGCCTCGGTCTTCCGGATGCCCTCATCGGTGTCGGGTG GCCACTTATGCATAAAGAATTCTCCGCACCCGTATCGATGGTCGGATGGATTTTCATGACGATTGCTGGTGGAACGATTC TTTCGAGTCTACTGAGCGGTAAACTATTGGAACGTTTTGACACGAAACAAGTCACGTTCGGTTCGACATTACTCACAGCG CTCTGTCTGTTCGGATTCTACTCTGCTCCTTCAATCGGTTGGCTATTCGTATTTGCCATCCCACTCGGTCTAGGTGCCGG TGCCGTCGATGCCGCTCTGAATCATTACGTTGCCGAACATTACGAAGCACATCATATGAACTGGCTACACTGCTTTTGGG GAATCGGCGCGACCGGGGGACCACTCGTCATGGCGGGTGTATTGACGGAGGATGGATGGCGTGACGGCTATTTGATCATC GCCGCCGTTCAGTTCAGTTTAGCTCTCATATTGTGGTTGTCTTTCCCGCTTTGGAAACAGAAAGAGGATCCCACTTCACA TCCCCAAGAAACAGCCGTCACGACACTCGATCGCAAGCTACCGAGCGGGGTGTCCTATGCATTGGCCACATTTCTACTTT ATTGTGGGGTCGAAGCGTTAATTGGGTTATGGACGAGCAGTTATCTCGTACAGATGAAACAGTTCTCCATCGCGACGGCT GCAGCATGGGTGTCCATCTACTACGGCAGTATCACAATCGGACGGTTCGTGAGCGGGTTCCTCTCGTTCCGTTTCTCGAA CAAACAAATGATTCGGATGGGACAAATACTCGCCCTTGTCGGAAGCATCCTCTTCTTCATCCCAATTTCCGGAACGATGC TCGTCGGCTTGATGCTGATTGGCTTTGGATTGGCTCCGATTTATCCGAGCATGCTTCACGAAACGCCGAATCGATTCGGT TCGGCACAATCGAAACGTTTGATGGGTTTTCAAATGGCATTCGCCTACTCAGGGAGTACGTTTCTCCCCCCGTTATTCGG ATTGATTGTATCTGTGACGTCACTCCGTTTTTTACCACTTGTGATCATCCTGATTATGGCTGGCATGCTCTTCAATACAG AACGGCTGAATCAAATGATTAGACGAACATCATAG
Upstream 100 bases:
>100_bases TTCCTCGTCTTCAAATCGGAGAATGGGAAGAAGATTACTTTTTCGGGCTGGCTCGACTCGGCATTGAATTGATGCTCGAA ACGATTCCGCGAGGTGACGT
Downstream 100 bases:
>100_bases GAGGATTCTATATGAGAATCGAACATGTCGCCCTGTGGGTAGACGACATCGAAAACATGCGCAGGTTTTACGAAATCTAT TTTGATGCACAGTCCAATGC
Product: major facilitator superfamily MFS_1
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Transporter Fucose Permease; MFS Family Facilitator Transporter; Transporter Facilitator Family; Fucose Permease; Facilitator Superfamily Transporter; Multidrug Resistance Protein; Transporter Facilitator Family Protein; Facilitator Family Transporter
Number of amino acids: Translated: 384; Mature: 383
Protein sequence:
>384_residues MTIVLLAVIYLAFISLGLPDALIGVGWPLMHKEFSAPVSMVGWIFMTIAGGTILSSLLSGKLLERFDTKQVTFGSTLLTA LCLFGFYSAPSIGWLFVFAIPLGLGAGAVDAALNHYVAEHYEAHHMNWLHCFWGIGATGGPLVMAGVLTEDGWRDGYLII AAVQFSLALILWLSFPLWKQKEDPTSHPQETAVTTLDRKLPSGVSYALATFLLYCGVEALIGLWTSSYLVQMKQFSIATA AAWVSIYYGSITIGRFVSGFLSFRFSNKQMIRMGQILALVGSILFFIPISGTMLVGLMLIGFGLAPIYPSMLHETPNRFG SAQSKRLMGFQMAFAYSGSTFLPPLFGLIVSVTSLRFLPLVIILIMAGMLFNTERLNQMIRRTS
Sequences:
>Translated_384_residues MTIVLLAVIYLAFISLGLPDALIGVGWPLMHKEFSAPVSMVGWIFMTIAGGTILSSLLSGKLLERFDTKQVTFGSTLLTA LCLFGFYSAPSIGWLFVFAIPLGLGAGAVDAALNHYVAEHYEAHHMNWLHCFWGIGATGGPLVMAGVLTEDGWRDGYLII AAVQFSLALILWLSFPLWKQKEDPTSHPQETAVTTLDRKLPSGVSYALATFLLYCGVEALIGLWTSSYLVQMKQFSIATA AAWVSIYYGSITIGRFVSGFLSFRFSNKQMIRMGQILALVGSILFFIPISGTMLVGLMLIGFGLAPIYPSMLHETPNRFG SAQSKRLMGFQMAFAYSGSTFLPPLFGLIVSVTSLRFLPLVIILIMAGMLFNTERLNQMIRRTS >Mature_383_residues TIVLLAVIYLAFISLGLPDALIGVGWPLMHKEFSAPVSMVGWIFMTIAGGTILSSLLSGKLLERFDTKQVTFGSTLLTAL CLFGFYSAPSIGWLFVFAIPLGLGAGAVDAALNHYVAEHYEAHHMNWLHCFWGIGATGGPLVMAGVLTEDGWRDGYLIIA AVQFSLALILWLSFPLWKQKEDPTSHPQETAVTTLDRKLPSGVSYALATFLLYCGVEALIGLWTSSYLVQMKQFSIATAA AWVSIYYGSITIGRFVSGFLSFRFSNKQMIRMGQILALVGSILFFIPISGTMLVGLMLIGFGLAPIYPSMLHETPNRFGS AQSKRLMGFQMAFAYSGSTFLPPLFGLIVSVTSLRFLPLVIILIMAGMLFNTERLNQMIRRTS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42046; Mature: 41915
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIVLLAVIYLAFISLGLPDALIGVGWPLMHKEFSAPVSMVGWIFMTIAGGTILSSLLSG CHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH KLLERFDTKQVTFGSTLLTALCLFGFYSAPSIGWLFVFAIPLGLGAGAVDAALNHYVAEH HHHHHHCCCCEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH YEAHHMNWLHCFWGIGATGGPLVMAGVLTEDGWRDGYLIIAAVQFSLALILWLSFPLWKQ HHHHCCCHHHHHHCCCCCCCHHEEEEHHCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCC KEDPTSHPQETAVTTLDRKLPSGVSYALATFLLYCGVEALIGLWTSSYLVQMKQFSIATA CCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAWVSIYYGSITIGRFVSGFLSFRFSNKQMIRMGQILALVGSILFFIPISGTMLVGLMLI HHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH GFGLAPIYPSMLHETPNRFGSAQSKRLMGFQMAFAYSGSTFLPPLFGLIVSVTSLRFLPL HHCHHHHHHHHHHHCHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH VIILIMAGMLFNTERLNQMIRRTS HHHHHHHHHHCCHHHHHHHHHHCC >Mature Secondary Structure TIVLLAVIYLAFISLGLPDALIGVGWPLMHKEFSAPVSMVGWIFMTIAGGTILSSLLSG HHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH KLLERFDTKQVTFGSTLLTALCLFGFYSAPSIGWLFVFAIPLGLGAGAVDAALNHYVAEH HHHHHHCCCCEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH YEAHHMNWLHCFWGIGATGGPLVMAGVLTEDGWRDGYLIIAAVQFSLALILWLSFPLWKQ HHHHCCCHHHHHHCCCCCCCHHEEEEHHCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCC KEDPTSHPQETAVTTLDRKLPSGVSYALATFLLYCGVEALIGLWTSSYLVQMKQFSIATA CCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAWVSIYYGSITIGRFVSGFLSFRFSNKQMIRMGQILALVGSILFFIPISGTMLVGLMLI HHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH GFGLAPIYPSMLHETPNRFGSAQSKRLMGFQMAFAYSGSTFLPPLFGLIVSVTSLRFLPL HHCHHHHHHHHHHHCHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH VIILIMAGMLFNTERLNQMIRRTS HHHHHHHHHHCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA