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The map label for this gene is xylR [H]

Identifier: 229916184

GI number: 229916184

Start: 415000

End: 416010

Strand: Direct

Name: xylR [H]

Synonym: EAT1b_0453

Alternate gene names: 229916184

Gene position: 415000-416010 (Clockwise)

Preceding gene: 229916177

Following gene: 229916185

Centisome position: 13.83

GC content: 45.99

Gene sequence:

>1011_bases
ATGAAAGATCCACAGCATGAATTACTAGTCGACATTCGAAAGCAGATCGTCCTACACAACGTATCGACAATTTCCGAGTT
GAGTATGGTCACGCACGTTTCATTCCCTACCGTCAAGAAGATAATCGATGACATGATCGAATACGGTGAAGTCATCGAAC
ACGGTCAACATGCCTCAAAAGGAGGTAGGCCCGCAAAAAGTTATGGGTACAATCCCACTTTTCGTCATTGCCTAACCCTA
TACATCGAAGCGAGCGAGATTCACTATCGCTTAATTGACTGTCAAACTCAGATTCTTGAAGAAGGTGTAACATTAGTCAA
AGGCACGCATTTAGAAACGTTAGGCAAACTCGTCGATACATTCGATGAGCACACAATAAAAATCGGTGCCATCTCTGTCG
GTGTCGCCGCTGCAGTCGATACGGGTCGAATTGTTTTCGCCCCAGAATATCCATCACTGGCGCATTTAGATTTGAAGAAC
TGGTTGATGGAACGAACTGGACTTCCGGTCGTCATTGAAAATGATATGAATGCCGCCGTTTATGGATTTTCCATACGAGA
TGAGACCACAACACATCAGTCCATCGTCTATCTCGGCCTCGGAAAGAATGGTCCGGGTGCTGGCATCTTGCTCGATGGAC
ATGTCGCTCGGGGACAATCCGGATTCAGTGGTGAAGTTTCATTTCTTCCGCTTTATAACGATGCATCATTTTATGACCGC
ATAAAAAATAAACCTTATGGACCACACCTTCTGAGAAAAGAAGAAATCGATGCATTGGGACGGCTCGTCGCTACATTTGC
TGCGACACTCAACCCACACACCTTCATCTTTTCAGATGTCGACCTCGTTCTAGACGATTTATCTCACATCAGCCGCGCAT
GCGATCGATATCTTCCCTCTCGTCACATTCCTCGTCTTCAAATCGGAGAATGGGAAGAAGATTACTTTTTCGGGCTGGCT
CGACTCGGCATTGAATTGATGCTCGAAACGATTCCGCGAGGTGACGTATGA

Upstream 100 bases:

>100_bases
ATCTCAAATTTCTTATTTTTCTGGCATGTTCAAATGAGAAGCGATATACTACAAGCAACTTATTAAAATATTTTAAAAAG
TAGATGGGAGTTCAATCGTG

Downstream 100 bases:

>100_bases
CGATTGTATTATTGGCCGTGATCTATCTCGCGTTTATCAGCCTCGGTCTTCCGGATGCCCTCATCGGTGTCGGGTGGCCA
CTTATGCATAAAGAATTCTC

Product: ROK family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MKDPQHELLVDIRKQIVLHNVSTISELSMVTHVSFPTVKKIIDDMIEYGEVIEHGQHASKGGRPAKSYGYNPTFRHCLTL
YIEASEIHYRLIDCQTQILEEGVTLVKGTHLETLGKLVDTFDEHTIKIGAISVGVAAAVDTGRIVFAPEYPSLAHLDLKN
WLMERTGLPVVIENDMNAAVYGFSIRDETTTHQSIVYLGLGKNGPGAGILLDGHVARGQSGFSGEVSFLPLYNDASFYDR
IKNKPYGPHLLRKEEIDALGRLVATFAATLNPHTFIFSDVDLVLDDLSHISRACDRYLPSRHIPRLQIGEWEEDYFFGLA
RLGIELMLETIPRGDV

Sequences:

>Translated_336_residues
MKDPQHELLVDIRKQIVLHNVSTISELSMVTHVSFPTVKKIIDDMIEYGEVIEHGQHASKGGRPAKSYGYNPTFRHCLTL
YIEASEIHYRLIDCQTQILEEGVTLVKGTHLETLGKLVDTFDEHTIKIGAISVGVAAAVDTGRIVFAPEYPSLAHLDLKN
WLMERTGLPVVIENDMNAAVYGFSIRDETTTHQSIVYLGLGKNGPGAGILLDGHVARGQSGFSGEVSFLPLYNDASFYDR
IKNKPYGPHLLRKEEIDALGRLVATFAATLNPHTFIFSDVDLVLDDLSHISRACDRYLPSRHIPRLQIGEWEEDYFFGLA
RLGIELMLETIPRGDV
>Mature_336_residues
MKDPQHELLVDIRKQIVLHNVSTISELSMVTHVSFPTVKKIIDDMIEYGEVIEHGQHASKGGRPAKSYGYNPTFRHCLTL
YIEASEIHYRLIDCQTQILEEGVTLVKGTHLETLGKLVDTFDEHTIKIGAISVGVAAAVDTGRIVFAPEYPSLAHLDLKN
WLMERTGLPVVIENDMNAAVYGFSIRDETTTHQSIVYLGLGKNGPGAGILLDGHVARGQSGFSGEVSFLPLYNDASFYDR
IKNKPYGPHLLRKEEIDALGRLVATFAATLNPHTFIFSDVDLVLDDLSHISRACDRYLPSRHIPRLQIGEWEEDYFFGLA
RLGIELMLETIPRGDV

Specific function: Transcriptional repressor of xylose-utilizing enzymes [H]

COG id: COG1940

COG function: function code KG; Transcriptional regulator/sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ROK (nagC/xylR) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000600
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00480 ROK [H]

EC number: NA

Molecular weight: Translated: 37493; Mature: 37493

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDPQHELLVDIRKQIVLHNVSTISELSMVTHVSFPTVKKIIDDMIEYGEVIEHGQHASK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCC
GGRPAKSYGYNPTFRHCLTLYIEASEIHYRLIDCQTQILEEGVTLVKGTHLETLGKLVDT
CCCCCHHCCCCHHHHHHEEEEEEECHHEEEEHHHHHHHHHCCCCEECCCCHHHHHHHHHH
FDEHTIKIGAISVGVAAAVDTGRIVFAPEYPSLAHLDLKNWLMERTGLPVVIENDMNAAV
HCCCEEEEEEEEECCEEEECCCEEEECCCCCCEEEHHHHHHHHHHCCCCEEEECCCCEEE
YGFSIRDETTTHQSIVYLGLGKNGPGAGILLDGHVARGQSGFSGEVSFLPLYNDASFYDR
EEEEECCCCCCCCEEEEEEECCCCCCCEEEEECCEECCCCCCCCCEEEEEEECCCHHHHH
IKNKPYGPHLLRKEEIDALGRLVATFAATLNPHTFIFSDVDLVLDDLSHISRACDRYLPS
HCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHCCC
RHIPRLQIGEWEEDYFFGLARLGIELMLETIPRGDV
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKDPQHELLVDIRKQIVLHNVSTISELSMVTHVSFPTVKKIIDDMIEYGEVIEHGQHASK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCC
GGRPAKSYGYNPTFRHCLTLYIEASEIHYRLIDCQTQILEEGVTLVKGTHLETLGKLVDT
CCCCCHHCCCCHHHHHHEEEEEEECHHEEEEHHHHHHHHHCCCCEECCCCHHHHHHHHHH
FDEHTIKIGAISVGVAAAVDTGRIVFAPEYPSLAHLDLKNWLMERTGLPVVIENDMNAAV
HCCCEEEEEEEEECCEEEECCCEEEECCCCCCEEEHHHHHHHHHHCCCCEEEECCCCEEE
YGFSIRDETTTHQSIVYLGLGKNGPGAGILLDGHVARGQSGFSGEVSFLPLYNDASFYDR
EEEEECCCCCCCCEEEEEEECCCCCCCEEEEECCEECCCCCCCCCEEEEEEECCCHHHHH
IKNKPYGPHLLRKEEIDALGRLVATFAATLNPHTFIFSDVDLVLDDLSHISRACDRYLPS
HCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHCCC
RHIPRLQIGEWEEDYFFGLARLGIELMLETIPRGDV
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2544559 [H]