Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

Click here to switch to the map view.

The map label for this gene is pgsA [H]

Identifier: 229916162

GI number: 229916162

Start: 394606

End: 395184

Strand: Reverse

Name: pgsA [H]

Synonym: EAT1b_0431

Alternate gene names: 229916162

Gene position: 395184-394606 (Counterclockwise)

Preceding gene: 229916163

Following gene: 229916161

Centisome position: 13.17

GC content: 50.09

Gene sequence:

>579_bases
ATGAACCTACCTAACCGATTGACGATGCTACGCGTGGTCTTGATCCCCGTATTCGTCGTCTTACTCGCTGTTGATTTTGA
TTGGGGAAACATCGCTTTTCTAGGCGCTGAAATCCCGATGCACCAATTTATCGCTGGTGTGATTTTTACGATTGCGGCCA
TCACGGATTGGTTAGACGGACATTTGGCCCGTAAGCATAACCTGGTCACGAACTTTGGTAAATTTATGGACCCGCTCGCA
GATAAACTGCTCGTCACGGCAGCACTTGTGTTGCTCGTTGAGATGGATCTCGTCGCGGCGTGGGTTGTCGTCGTGATTCT
ATCACGTGAATTTGCGGTCACAGGCTTACGCCTCGTCGCTGCTGACGAAGGGATCGTCGTCGCGGCCGGGAAGTCTGGAA
AAGCGAAGACGTGGGTGCAGCTCTTTGCCATCATCTTCTTACTGTTCGGTAACCCGATCTTTAGCTATGTCGGGATTCCG
TTTGGCGAATGGGCGATGTGGTTGGCGCTCGTGCTTACAATTTATTCTGGCGCCGAATATTTCGCACAAAACTATAAGAT
TATTGTGAAGTCGATGTGA

Upstream 100 bases:

>100_bases
GTGAGCTCGAGCTTCAAGAGTCTCCGGTCACACAAAATATTTTTGTAAAGAGAGTCGACGCCGAATAAGTCGACTCTCCT
TCTAAGAGGAGGCGTTCTAT

Downstream 100 bases:

>100_bases
GTCGACAGAGACGAGTTGGTTGATCTAGCTCGTCTTTTTTTTGAAGTCGAGGAGGAAATACGATGAAACGAGCCGAAATC
ATTGCGGTAGGAAGTGAGTT

Product: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase

Products: NA

Alternate protein names: Phosphatidylglycerophosphate synthase; PGP synthase [H]

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MNLPNRLTMLRVVLIPVFVVLLAVDFDWGNIAFLGAEIPMHQFIAGVIFTIAAITDWLDGHLARKHNLVTNFGKFMDPLA
DKLLVTAALVLLVEMDLVAAWVVVVILSREFAVTGLRLVAADEGIVVAAGKSGKAKTWVQLFAIIFLLFGNPIFSYVGIP
FGEWAMWLALVLTIYSGAEYFAQNYKIIVKSM

Sequences:

>Translated_192_residues
MNLPNRLTMLRVVLIPVFVVLLAVDFDWGNIAFLGAEIPMHQFIAGVIFTIAAITDWLDGHLARKHNLVTNFGKFMDPLA
DKLLVTAALVLLVEMDLVAAWVVVVILSREFAVTGLRLVAADEGIVVAAGKSGKAKTWVQLFAIIFLLFGNPIFSYVGIP
FGEWAMWLALVLTIYSGAEYFAQNYKIIVKSM
>Mature_192_residues
MNLPNRLTMLRVVLIPVFVVLLAVDFDWGNIAFLGAEIPMHQFIAGVIFTIAAITDWLDGHLARKHNLVTNFGKFMDPLA
DKLLVTAALVLLVEMDLVAAWVVVVILSREFAVTGLRLVAADEGIVVAAGKSGKAKTWVQLFAIIFLLFGNPIFSYVGIP
FGEWAMWLALVLTIYSGAEYFAQNYKIIVKSM

Specific function: This protein catalyzes the committed step to the synthesis of the acidic phospholipids [H]

COG id: COG0558

COG function: function code I; Phosphatidylglycerophosphate synthase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]

Homologues:

Organism=Escherichia coli, GI1788220, Length=187, Percent_Identity=37.4331550802139, Blast_Score=100, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000462
- InterPro:   IPR004570 [H]

Pfam domain/function: PF01066 CDP-OH_P_transf [H]

EC number: =2.7.8.5 [H]

Molecular weight: Translated: 21199; Mature: 21199

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLPNRLTMLRVVLIPVFVVLLAVDFDWGNIAFLGAEIPMHQFIAGVIFTIAAITDWLDG
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHH
HLARKHNLVTNFGKFMDPLADKLLVTAALVLLVEMDLVAAWVVVVILSREFAVTGLRLVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE
ADEGIVVAAGKSGKAKTWVQLFAIIFLLFGNPIFSYVGIPFGEWAMWLALVLTIYSGAEY
ECCCEEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHCCHHH
FAQNYKIIVKSM
HHCCCEEEEECC
>Mature Secondary Structure
MNLPNRLTMLRVVLIPVFVVLLAVDFDWGNIAFLGAEIPMHQFIAGVIFTIAAITDWLDG
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHH
HLARKHNLVTNFGKFMDPLADKLLVTAALVLLVEMDLVAAWVVVVILSREFAVTGLRLVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE
ADEGIVVAAGKSGKAKTWVQLFAIIFLLFGNPIFSYVGIPFGEWAMWLALVLTIYSGAEY
ECCCEEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHCCHHH
FAQNYKIIVKSM
HHCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7750561; 9384377 [H]