| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is cinA [H]
Identifier: 229916161
GI number: 229916161
Start: 393317
End: 394543
Strand: Reverse
Name: cinA [H]
Synonym: EAT1b_0430
Alternate gene names: 229916161
Gene position: 394543-393317 (Counterclockwise)
Preceding gene: 229916162
Following gene: 229916160
Centisome position: 13.15
GC content: 51.34
Gene sequence:
>1227_bases ATGAAACGAGCCGAAATCATTGCGGTAGGAAGTGAGTTGCTCTTAGGGGAAATCGTCAATACGAATGCGAGTTACATATC AGAACAACTGTCGAAGTACGGTGTGCCGGTCTTGTATCATCAAGTTGTCGGGGATAACGCGGCACGAATGCGAGAGACAT TTGAAATCGCCCGTCGTCGTTCTGACTTTGTCATCGTCACGGGTGGGCTCGGGCCGACGGCGGATGATGTCACAAAGACG GTCCTTTCCGACTTACTCGAACGTCCGATTGTGCGAGATGAGGAAGCGTATGAGACGATTCAACGTTTCCTCGTGTCACG AAATCGATTGATGAACGATGGGGACGCTCGCCAAGCCGACGTGCTCAGCGGAGCAGACGTATTACCAAATCCGGTCGGGC TTGCCCCGGGCATGTGGATCGCCGGAGATACGACGTGGTTGCTTTTACCGGGTGTGCCACGTGAGATGAAAGCATTGATC GAGGCGACGTTTCCGAAGAAACTATCAGGAGCGACGCTCGTCTCAGAATCATTACGGTTTTATGAGATTGGAGAATCCGC TCTCGATGATGCCGTGAAGGACTTATTGGATGGTTCGAATCCGACCGTTGCCCCCTACGCCGAGACGGGAGAGGCAAGAC TTCGGATCAGTGCCCGTGCGACGGACGAGGTGACCGCGCGTCAGATGATTGAAGAAGTGAAGACTGAAATCCTGAAACGG GTCGGTTCGTACTACTTTGGCTCTGACGATGAGACGATTGCATCACATCTTGTCCAATCATTGTCTAGATTGAATCGAAC GTTCGCTGTTGCTGAGTCGTTGACCGGCGGTGAGGTACAATCGATGGTTACATCAACACCTGGCGCTTCAGTCGTCTTTC TAGGTGGAGTCGTGACCTATTCGGATGAGCTAAAAAATAGGTATTTAGGTGTCTCGCTTGATACAATTGAACAGCACTCA GTCGTCTCAAAAGAAGTTGCCTATGAGATGGTGGACGGATTGTCAAAGACCACCCATGCCGACTATGCCCTCTCTTTCAC GGGAGAGGCAGGACCGACATCGAATTCGGGTCGTCCAATTGGTACGGTCTATATCGGAGTGAAGACACCAAACGGAATAG AGGTCATCGAGCGGACGTATCTCCATCAAGAACGGAATATCATCCGCATGCGAGCCGCGAAGGACGGATTATGGGCCCTC ATTCAACGAATCAAAAAAGGCGAATAA
Upstream 100 bases:
>100_bases TCGCACAAAACTATAAGATTATTGTGAAGTCGATGTGAGTCGACAGAGACGAGTTGGTTGATCTAGCTCGTCTTTTTTTT GAAGTCGAGGAGGAAATACG
Downstream 100 bases:
>100_bases ATGTTCGTAAAAAACTTGTGTATCGTACAGTGTTCACGTATAATAAGAGTATCAATTAAAGGAGGCTCATTTACCTATGA GTGATCGTAAACAAGCGTTA
Product: competence/damage-inducible protein CinA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 408; Mature: 408
Protein sequence:
>408_residues MKRAEIIAVGSELLLGEIVNTNASYISEQLSKYGVPVLYHQVVGDNAARMRETFEIARRRSDFVIVTGGLGPTADDVTKT VLSDLLERPIVRDEEAYETIQRFLVSRNRLMNDGDARQADVLSGADVLPNPVGLAPGMWIAGDTTWLLLPGVPREMKALI EATFPKKLSGATLVSESLRFYEIGESALDDAVKDLLDGSNPTVAPYAETGEARLRISARATDEVTARQMIEEVKTEILKR VGSYYFGSDDETIASHLVQSLSRLNRTFAVAESLTGGEVQSMVTSTPGASVVFLGGVVTYSDELKNRYLGVSLDTIEQHS VVSKEVAYEMVDGLSKTTHADYALSFTGEAGPTSNSGRPIGTVYIGVKTPNGIEVIERTYLHQERNIIRMRAAKDGLWAL IQRIKKGE
Sequences:
>Translated_408_residues MKRAEIIAVGSELLLGEIVNTNASYISEQLSKYGVPVLYHQVVGDNAARMRETFEIARRRSDFVIVTGGLGPTADDVTKT VLSDLLERPIVRDEEAYETIQRFLVSRNRLMNDGDARQADVLSGADVLPNPVGLAPGMWIAGDTTWLLLPGVPREMKALI EATFPKKLSGATLVSESLRFYEIGESALDDAVKDLLDGSNPTVAPYAETGEARLRISARATDEVTARQMIEEVKTEILKR VGSYYFGSDDETIASHLVQSLSRLNRTFAVAESLTGGEVQSMVTSTPGASVVFLGGVVTYSDELKNRYLGVSLDTIEQHS VVSKEVAYEMVDGLSKTTHADYALSFTGEAGPTSNSGRPIGTVYIGVKTPNGIEVIERTYLHQERNIIRMRAAKDGLWAL IQRIKKGE >Mature_408_residues MKRAEIIAVGSELLLGEIVNTNASYISEQLSKYGVPVLYHQVVGDNAARMRETFEIARRRSDFVIVTGGLGPTADDVTKT VLSDLLERPIVRDEEAYETIQRFLVSRNRLMNDGDARQADVLSGADVLPNPVGLAPGMWIAGDTTWLLLPGVPREMKALI EATFPKKLSGATLVSESLRFYEIGESALDDAVKDLLDGSNPTVAPYAETGEARLRISARATDEVTARQMIEEVKTEILKR VGSYYFGSDDETIASHLVQSLSRLNRTFAVAESLTGGEVQSMVTSTPGASVVFLGGVVTYSDELKNRYLGVSLDTIEQHS VVSKEVAYEMVDGLSKTTHADYALSFTGEAGPTSNSGRPIGTVYIGVKTPNGIEVIERTYLHQERNIIRMRAAKDGLWAL IQRIKKGE
Specific function: Unknown
COG id: COG1058
COG function: function code R; Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CinA family [H]
Homologues:
Organism=Escherichia coli, GI1788583, Length=286, Percent_Identity=25.8741258741259, Blast_Score=99, Evalue=5e-22, Organism=Escherichia coli, GI1789052, Length=153, Percent_Identity=36.6013071895425, Blast_Score=96, Evalue=4e-21, Organism=Escherichia coli, GI1787818, Length=116, Percent_Identity=34.4827586206897, Blast_Score=66, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6323832, Length=174, Percent_Identity=27.5862068965517, Blast_Score=75, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008136 - InterPro: IPR008135 - InterPro: IPR001453 [H]
Pfam domain/function: PF02464 CinA; PF00994 MoCF_biosynth [H]
EC number: NA
Molecular weight: Translated: 44548; Mature: 44548
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRAEIIAVGSELLLGEIVNTNASYISEQLSKYGVPVLYHQVVGDNAARMRETFEIARRR CCCCEEEEECHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHCC SDFVIVTGGLGPTADDVTKTVLSDLLERPIVRDEEAYETIQRFLVSRNRLMNDGDARQAD CCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHH VLSGADVLPNPVGLAPGMWIAGDTTWLLLPGVPREMKALIEATFPKKLSGATLVSESLRF HHCCCCCCCCCCCCCCCCEEECCCEEEEECCCCHHHHHHHHHHCCCCCCCHHHHHHCCHH YEIGESALDDAVKDLLDGSNPTVAPYAETGEARLRISARATDEVTARQMIEEVKTEILKR HHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHH VGSYYFGSDDETIASHLVQSLSRLNRTFAVAESLTGGEVQSMVTSTPGASVVFLGGVVTY HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEECCEEEE SDELKNRYLGVSLDTIEQHSVVSKEVAYEMVDGLSKTTHADYALSFTGEAGPTSNSGRPI CHHHHHCEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEE GTVYIGVKTPNGIEVIERTYLHQERNIIRMRAAKDGLWALIQRIKKGE EEEEEEEECCCHHHHHHHHHHHHHHCEEEEHHCCCHHHHHHHHHHCCC >Mature Secondary Structure MKRAEIIAVGSELLLGEIVNTNASYISEQLSKYGVPVLYHQVVGDNAARMRETFEIARRR CCCCEEEEECHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHCC SDFVIVTGGLGPTADDVTKTVLSDLLERPIVRDEEAYETIQRFLVSRNRLMNDGDARQAD CCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHH VLSGADVLPNPVGLAPGMWIAGDTTWLLLPGVPREMKALIEATFPKKLSGATLVSESLRF HHCCCCCCCCCCCCCCCCEEECCCEEEEECCCCHHHHHHHHHHCCCCCCCHHHHHHCCHH YEIGESALDDAVKDLLDGSNPTVAPYAETGEARLRISARATDEVTARQMIEEVKTEILKR HHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHH VGSYYFGSDDETIASHLVQSLSRLNRTFAVAESLTGGEVQSMVTSTPGASVVFLGGVVTY HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEECCEEEE SDELKNRYLGVSLDTIEQHSVVSKEVAYEMVDGLSKTTHADYALSFTGEAGPTSNSGRPI CHHHHHCEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEE GTVYIGVKTPNGIEVIERTYLHQERNIIRMRAAKDGLWALIQRIKKGE EEEEEEEECCCHHHHHHHHHHHHHHCEEEEHHCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA