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The map label for this gene is ymdB [H]

Identifier: 229916158

GI number: 229916158

Start: 389597

End: 390391

Strand: Reverse

Name: ymdB [H]

Synonym: EAT1b_0427

Alternate gene names: 229916158

Gene position: 390391-389597 (Counterclockwise)

Preceding gene: 229916159

Following gene: 229916157

Centisome position: 13.01

GC content: 50.19

Gene sequence:

>795_bases
ATGAAAATTTTATTTATTGGTGATGTGGTCGGGAAACCCGGTCGAGATATTTTGAGCAATCAAATTGGTCGGTTGAAAGA
CAAATACAACCCGACGTTCATGCTCGTCAACGGTGAGAACGCGGCAAACGGTCGTGGTCTCACGAAAAAGATTTACCAAC
AGTTTTTAGAGCTCGGCTTTCATGGGGTGACGATGGGAAACCACACGTGGGACAATCGTGATATCTTTGAGTGGATCGAC
GACGCCGACCGCATCGTCCGTCCGGCCAACTATCCGGACGGGACACCTGGTGTCGGGATGATGAAATTGAAACAAAACGG
GAAGAAACTGGCCGTGATCAACGTCATGGGAAATGTCTTCTTGCCGTCTCTTGATTGTCCGTTCCGTACCGTCGATCGTC
TTGTCGAGGAAGTACGGGATGAGGTCGATGCGATCTTTGTGGATGTCCATGCTGAGGCGACAAGCGAGAAGATCGCCATG
GGCTATCATCTCGACGGTCGCGCTCAGGCCGTAGTCGGGACGCATACGCACGTACAGACGGCAGATGAACGTGTCTTGCC
GAACGGGACAGCGTACATCACCGACGTCGGGATGACCGGTCCACTTGACGGGGTACTCGGCATGGATGCATCCGTTGTTT
TAAAAAAATTTATGACACAACTCCCAGTTCGGTTTGAAGTTGCCGAGGGACGGGAACAACTTAATGGAGTTTTCATTACA
ATCGATGATCAGACGAAACGAGCGACAAAAATCGAACGAATACACCTAGATGATCAGACCGTCTGGTTTGATTGA

Upstream 100 bases:

>100_bases
AATCAAAGTGACGGTCATTCGTGAAACACGTTCCGTCGATTATGCGAAGTAAACGAAGCGGAGAATTTCTCCGCTTTTTC
TGTTTGAGGGAGGACTTTAT

Downstream 100 bases:

>100_bases
ACAACCTACCCGAGGGGGAAACAAGAATGGACGTACTCAAAGTTTCGGCAAAATCGAACCCTAACTCCGTTGCGGGTGCT
TTAGCGGGTGTGCTACGTGA

Product: metallophosphoesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MKILFIGDVVGKPGRDILSNQIGRLKDKYNPTFMLVNGENAANGRGLTKKIYQQFLELGFHGVTMGNHTWDNRDIFEWID
DADRIVRPANYPDGTPGVGMMKLKQNGKKLAVINVMGNVFLPSLDCPFRTVDRLVEEVRDEVDAIFVDVHAEATSEKIAM
GYHLDGRAQAVVGTHTHVQTADERVLPNGTAYITDVGMTGPLDGVLGMDASVVLKKFMTQLPVRFEVAEGREQLNGVFIT
IDDQTKRATKIERIHLDDQTVWFD

Sequences:

>Translated_264_residues
MKILFIGDVVGKPGRDILSNQIGRLKDKYNPTFMLVNGENAANGRGLTKKIYQQFLELGFHGVTMGNHTWDNRDIFEWID
DADRIVRPANYPDGTPGVGMMKLKQNGKKLAVINVMGNVFLPSLDCPFRTVDRLVEEVRDEVDAIFVDVHAEATSEKIAM
GYHLDGRAQAVVGTHTHVQTADERVLPNGTAYITDVGMTGPLDGVLGMDASVVLKKFMTQLPVRFEVAEGREQLNGVFIT
IDDQTKRATKIERIHLDDQTVWFD
>Mature_264_residues
MKILFIGDVVGKPGRDILSNQIGRLKDKYNPTFMLVNGENAANGRGLTKKIYQQFLELGFHGVTMGNHTWDNRDIFEWID
DADRIVRPANYPDGTPGVGMMKLKQNGKKLAVINVMGNVFLPSLDCPFRTVDRLVEEVRDEVDAIFVDVHAEATSEKIAM
GYHLDGRAQAVVGTHTHVQTADERVLPNGTAYITDVGMTGPLDGVLGMDASVVLKKFMTQLPVRFEVAEGREQLNGVFIT
IDDQTKRATKIERIHLDDQTVWFD

Specific function: Unknown

COG id: COG1692

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005235 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29458; Mature: 29458

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILFIGDVVGKPGRDILSNQIGRLKDKYNPTFMLVNGENAANGRGLTKKIYQQFLELGF
CEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCC
HGVTMGNHTWDNRDIFEWIDDADRIVRPANYPDGTPGVGMMKLKQNGKKLAVINVMGNVF
CEEECCCCCCCCCHHHHHHCCHHHHCCCCCCCCCCCCCEEEEEECCCCEEEEEEEECCCC
LPSLDCPFRTVDRLVEEVRDEVDAIFVDVHAEATSEKIAMGYHLDGRAQAVVGTHTHVQT
CCCCCCCHHHHHHHHHHHHHHHHEEEEEEECCCCCCEEEEEEEECCCCEEEEECCCEEEC
ADERVLPNGTAYITDVGMTGPLDGVLGMDASVVLKKFMTQLPVRFEVAEGREQLNGVFIT
CCCEECCCCCEEEEECCCCCCCCCHHCCCHHHHHHHHHHHCCEEEEECCCHHHHCEEEEE
IDDQTKRATKIERIHLDDQTVWFD
ECCCCCHHHEEEEEEECCCEEECC
>Mature Secondary Structure
MKILFIGDVVGKPGRDILSNQIGRLKDKYNPTFMLVNGENAANGRGLTKKIYQQFLELGF
CEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCC
HGVTMGNHTWDNRDIFEWIDDADRIVRPANYPDGTPGVGMMKLKQNGKKLAVINVMGNVF
CEEECCCCCCCCCHHHHHHCCHHHHCCCCCCCCCCCCCEEEEEECCCCEEEEEEEECCCC
LPSLDCPFRTVDRLVEEVRDEVDAIFVDVHAEATSEKIAMGYHLDGRAQAVVGTHTHVQT
CCCCCCCHHHHHHHHHHHHHHHHEEEEEEECCCCCCEEEEEEEECCCCEEEEECCCEEEC
ADERVLPNGTAYITDVGMTGPLDGVLGMDASVVLKKFMTQLPVRFEVAEGREQLNGVFIT
CCCEECCCCCEEEEECCCCCCCCCHHCCCHHHHHHHHHHHCCEEEEECCCHHHHCEEEEE
IDDQTKRATKIERIHLDDQTVWFD
ECCCCCHHHEEEEEEECCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]