Click here to switch to the map view.

The map label for this gene is 229916159

Identifier: 229916159

GI number: 229916159

Start: 390440

End: 392002

Strand: Reverse

Name: 229916159

Synonym: EAT1b_0428

Alternate gene names: NA

Gene position: 392002-390440 (Counterclockwise)

Preceding gene: 229916160

Following gene: 229916158

Centisome position: 13.07

GC content: 49.84

Gene sequence:

>1563_bases
ATGATGGAATGGCTATACTGGCTTATTCTGATCCTCCTTTTGCCGATAGCTTTTGTTGCAGGTTTTTTTGTGCGTAAATC
GATCGCCGAAGCGAAGATTCAAGGTGCCGAGACGGAAGCGACTAAGATTGTAGAGCAAGCAAAACAACAATCGGAAGCGA
TGCAAAAAGAAGCACGGCTTGAAGTAAAAGAAGAGATGATTCAACTTCGTAATGAGACGGAACAAGAATTGCGTGAACGT
CGCGAAGAACAGAAAGTGAAAGAGAATCGCCTCGTTCAAAAGGAAGAGCTTCTTGACCGCAAAGCAGACATGCTCGAGCG
GAAAGAAGACTCGCTAGATGAACAGGAACGAGGACTCGAAAAACGCAAGCGTGAAGCAGAAATGCTCGAAAGCAAAGTGG
AGGAGTTATACGAAGAGGCACGCCAAGAACTTGTACGCGTGGCATCCCTCTCGAAAGATGAAGCACGTACCATCATCATG
GACGAAGCGAAGCAGGAAGCGCTTCACGATGCTGCTCTCCTTCAAAAAGAAATCGAGCAAAAAGCAAAACAAGAAGCGGA
TAAAAAAGCGAAACACCTCTTATCTCTCACGATGCAACGATATGCTGCTGAACATGTCGCCGAAACAACGGTATCTGTTG
TCAACTTACCGAGTGATGAGATGAAAGGTCGCATCATCGGGCGCGAAGGACGCAACATCCGAACGCTCGAAACGTTGACT
GGGATTGACCTCATCATCGATGACACACCAGAAGCCGTCATCTTGTCAGGTTTTGACCCAGTTCGTCGTGAAATCGCGAA
GATGACGCTTGAAAAACTCGTTCAAGACGGTCGGATTCATCCGGCTCGAATTGAAGAGATGGTAGAGAAGTCTCGCCGTG
AAGTGGATGAACGCATTCGTGAATACGGTGAGGAAGCCACGTTTGAAGCCGGCATTCACGGACTCCATCCAGACCTCGTC
AAGACGCTCGGTCGCATGCGCTATCGTACGAGTTATGGTCAGAACGTCTTGTCTCACTCGGTTGAGGTGGCACACCTTGC
CGGGATGATGGCAGCCGAACTCGGGGAAGACGTCACGCTCGCGAAACGGGCCGGACTCTTACACGATATCGGGAAAGCGA
TCGACCATGAAGTCGAAGGTAGTCACGTTGAAATCGGTGTAGAGCTTGCGACGAAATACAAAGAACATCCGGTCGTCATC
AATTCGATCGCTTCCCACCACGGGGACGTCGAGGCGACATCGACGATTGCAGTACTAGTCGCAGCGGCTGATGCCTTGTC
AGCAGCGCGTCCTGGAGCTCGCCAAGAGACGCTTGAAAGCTACATCCGTCGTCTTGAGCGACTCGAATCAATCTGTGAGT
CGTTCGAAGGTGTCGAGAAATCGTATGCGATTCAAGCAGGACGTGAAGTTCGAATTATCGTTCGCCCTGATGTCGTCGAC
GATGTCGTCGCCGGTAAGATGGCACGCGATATTTGTAAGCGAATCGAGGATGAACTCGATTATCCTGGACAAATCAAAGT
GACGGTCATTCGTGAAACACGTTCCGTCGATTATGCGAAGTAA

Upstream 100 bases:

>100_bases
CATTCTCCCTATTAAATAAGTACAATAAAGTTATGCGCGGGCTTGCCCGTGTATCTCACTTATTAAAAAAATAAAATAAC
CTTGCGAAAGGGAGGTGAAC

Downstream 100 bases:

>100_bases
ACGAAGCGGAGAATTTCTCCGCTTTTTCTGTTTGAGGGAGGACTTTATATGAAAATTTTATTTATTGGTGATGTGGTCGG
GAAACCCGGTCGAGATATTT

Product: RNA binding metal dependent phosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 520; Mature: 520

Protein sequence:

>520_residues
MMEWLYWLILILLLPIAFVAGFFVRKSIAEAKIQGAETEATKIVEQAKQQSEAMQKEARLEVKEEMIQLRNETEQELRER
REEQKVKENRLVQKEELLDRKADMLERKEDSLDEQERGLEKRKREAEMLESKVEELYEEARQELVRVASLSKDEARTIIM
DEAKQEALHDAALLQKEIEQKAKQEADKKAKHLLSLTMQRYAAEHVAETTVSVVNLPSDEMKGRIIGREGRNIRTLETLT
GIDLIIDDTPEAVILSGFDPVRREIAKMTLEKLVQDGRIHPARIEEMVEKSRREVDERIREYGEEATFEAGIHGLHPDLV
KTLGRMRYRTSYGQNVLSHSVEVAHLAGMMAAELGEDVTLAKRAGLLHDIGKAIDHEVEGSHVEIGVELATKYKEHPVVI
NSIASHHGDVEATSTIAVLVAAADALSAARPGARQETLESYIRRLERLESICESFEGVEKSYAIQAGREVRIIVRPDVVD
DVVAGKMARDICKRIEDELDYPGQIKVTVIRETRSVDYAK

Sequences:

>Translated_520_residues
MMEWLYWLILILLLPIAFVAGFFVRKSIAEAKIQGAETEATKIVEQAKQQSEAMQKEARLEVKEEMIQLRNETEQELRER
REEQKVKENRLVQKEELLDRKADMLERKEDSLDEQERGLEKRKREAEMLESKVEELYEEARQELVRVASLSKDEARTIIM
DEAKQEALHDAALLQKEIEQKAKQEADKKAKHLLSLTMQRYAAEHVAETTVSVVNLPSDEMKGRIIGREGRNIRTLETLT
GIDLIIDDTPEAVILSGFDPVRREIAKMTLEKLVQDGRIHPARIEEMVEKSRREVDERIREYGEEATFEAGIHGLHPDLV
KTLGRMRYRTSYGQNVLSHSVEVAHLAGMMAAELGEDVTLAKRAGLLHDIGKAIDHEVEGSHVEIGVELATKYKEHPVVI
NSIASHHGDVEATSTIAVLVAAADALSAARPGARQETLESYIRRLERLESICESFEGVEKSYAIQAGREVRIIVRPDVVD
DVVAGKMARDICKRIEDELDYPGQIKVTVIRETRSVDYAK
>Mature_520_residues
MMEWLYWLILILLLPIAFVAGFFVRKSIAEAKIQGAETEATKIVEQAKQQSEAMQKEARLEVKEEMIQLRNETEQELRER
REEQKVKENRLVQKEELLDRKADMLERKEDSLDEQERGLEKRKREAEMLESKVEELYEEARQELVRVASLSKDEARTIIM
DEAKQEALHDAALLQKEIEQKAKQEADKKAKHLLSLTMQRYAAEHVAETTVSVVNLPSDEMKGRIIGREGRNIRTLETLT
GIDLIIDDTPEAVILSGFDPVRREIAKMTLEKLVQDGRIHPARIEEMVEKSRREVDERIREYGEEATFEAGIHGLHPDLV
KTLGRMRYRTSYGQNVLSHSVEVAHLAGMMAAELGEDVTLAKRAGLLHDIGKAIDHEVEGSHVEIGVELATKYKEHPVVI
NSIASHHGDVEATSTIAVLVAAADALSAARPGARQETLESYIRRLERLESICESFEGVEKSYAIQAGREVRIIVRPDVVD
DVVAGKMARDICKRIEDELDYPGQIKVTVIRETRSVDYAK

Specific function: Catalyzes the hydrolysis of both 2',3'-cyclic AMP and 2',3'-cyclic GMP into 3'-AMP and 3'-GMP, respectively, at the 3'- terminal of RNA [H]

COG id: COG1418

COG function: function code R; Predicted HD superfamily hydrolase

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KH domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017705
- InterPro:   IPR022711
- InterPro:   IPR004087
- InterPro:   IPR004088
- InterPro:   IPR018111
- InterPro:   IPR003607
- InterPro:   IPR006675 [H]

Pfam domain/function: PF12072 DUF3552; PF00013 KH_1 [H]

EC number: =3.1.4.16 [H]

Molecular weight: Translated: 59079; Mature: 59079

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: PS50084 KH_TYPE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMEWLYWLILILLLPIAFVAGFFVRKSIAEAKIQGAETEATKIVEQAKQQSEAMQKEARL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
EVKEEMIQLRNETEQELRERREEQKVKENRLVQKEELLDRKADMLERKEDSLDEQERGLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
KRKREAEMLESKVEELYEEARQELVRVASLSKDEARTIIMDEAKQEALHDAALLQKEIEQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KAKQEADKKAKHLLSLTMQRYAAEHVAETTVSVVNLPSDEMKGRIIGREGRNIRTLETLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCEECCCCCCCCHHHHHC
GIDLIIDDTPEAVILSGFDPVRREIAKMTLEKLVQDGRIHPARIEEMVEKSRREVDERIR
CCEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
EYGEEATFEAGIHGLHPDLVKTLGRMRYRTSYGQNVLSHSVEVAHLAGMMAAELGEDVTL
HHCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
AKRAGLLHDIGKAIDHEVEGSHVEIGVELATKYKEHPVVINSIASHHGDVEATSTIAVLV
HHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHH
AAADALSAARPGARQETLESYIRRLERLESICESFEGVEKSYAIQAGREVRIIVRPDVVD
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHH
DVVAGKMARDICKRIEDELDYPGQIKVTVIRETRSVDYAK
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCC
>Mature Secondary Structure
MMEWLYWLILILLLPIAFVAGFFVRKSIAEAKIQGAETEATKIVEQAKQQSEAMQKEARL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
EVKEEMIQLRNETEQELRERREEQKVKENRLVQKEELLDRKADMLERKEDSLDEQERGLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
KRKREAEMLESKVEELYEEARQELVRVASLSKDEARTIIMDEAKQEALHDAALLQKEIEQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KAKQEADKKAKHLLSLTMQRYAAEHVAETTVSVVNLPSDEMKGRIIGREGRNIRTLETLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCEECCCCCCCCHHHHHC
GIDLIIDDTPEAVILSGFDPVRREIAKMTLEKLVQDGRIHPARIEEMVEKSRREVDERIR
CCEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
EYGEEATFEAGIHGLHPDLVKTLGRMRYRTSYGQNVLSHSVEVAHLAGMMAAELGEDVTL
HHCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
AKRAGLLHDIGKAIDHEVEGSHVEIGVELATKYKEHPVVINSIASHHGDVEATSTIAVLV
HHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHH
AAADALSAARPGARQETLESYIRRLERLESICESFEGVEKSYAIQAGREVRIIVRPDVVD
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHH
DVVAGKMARDICKRIEDELDYPGQIKVTVIRETRSVDYAK
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA