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The map label for this gene is ynbA [H]

Identifier: 229916145

GI number: 229916145

Start: 377108

End: 378355

Strand: Reverse

Name: ynbA [H]

Synonym: EAT1b_0414

Alternate gene names: 229916145

Gene position: 378355-377108 (Counterclockwise)

Preceding gene: 229916147

Following gene: 229916144

Centisome position: 12.61

GC content: 51.44

Gene sequence:

>1248_bases
ATGATAGAACGTGAAAAAGTTGTCATCGTCGGTTGTCAGTTGCCTGACACCGATGACTGGACATATGAACAGTCGATGGG
CGAGCTCGTCGAACTCGTGGACACGGCGCAAGGCGAAGTCGTTGCGCGACTCGACCAAAAGCGTCAACAAATCGACCGTC
GTACCTTTATCGGGAAAGGGAAAATCGAGGAACTGGCGATGCTCGTCGAACAGTTCGAGCCGGACTTATTGATTTTCAAC
GCTGAGTTGACACCGGCACAGTCGAAGAACATTCGCATCGCCTTGAACGACCCGGATGAAATGAAATTGATTGATCGCAC
CCAGCTCATCTTGGACATCTTTGCGAGCCGCGCGCAATCGCGGGAAGGGAAATTGCAGGTCGAACTCGCACAGATGAACT
ATTTGCTGCCGCGTCTCATCGGTCAGGGGACGCAACTCTCGCGACTCGGTGGTGGAATCGGGACGCGTGGTCCTGGTGAA
ACGAAGCTTGAATCGGACCGTCGTCACATCAAGCGACGCATCGATGAAATCACGAAACAGCTCGAGGGGACAGTCGCACA
CCGTGGACGTTACCGAGAACGCCGGAAAGAAAATCGCGTATTCCAAGTCGCGCTCGTCGGGTATACGAATGCTGGGAAGT
CGACAATCTTTAACCGATTGACGGATGCAGATACGTATGAACAGGATGAGTTATTTGCAACACTTGATCCGTTGACGCGT
GAGCTCGAACTTCCGCGAGGCGGGAAAGTGCTCATCACCGATACGGTTGGATTTATCCGTGACTTGCCGACGAAACTCGT
TGCGGCGTTTCGTTCGACTTTGGAAGAAGTCGTCGGTGCTGACTTGATTCTCCATGTCATCGATGCATCGAACCCGCACT
ACTTGAATCAAATCGATACGACGAATGCGGTATTGGAGGAGCTCGGTGCGAGTGAGGTGCCTCAGCTCGAGGTATATAAT
AAGAAAGACCGTCTTACGGAAGACTTCGTCGGCGGACCATTGTTGATCTCGGCAATCGCATCGGAAGATATCGTGACGTT
GACAGGAGCACTCGAGGATAAGATTGCGGACATTTTGACAAGAGTCCATGTCATCCTCCCGGTGACGGCGTTTGAACATT
ACCACCCGGCCAAAGAGGCGATGTATCGTCTTGAAGAGAGCTTTTTAGATGACGGTTCTGTCGAATTAGTAGGTTATATG
AGAGAAGACACGCGTCTATACGCGACGCTAAAACAATTTGAGGTGTAA

Upstream 100 bases:

>100_bases
GTCGAGCCTCCTTCTTCCTTTATCCTACCACAAACGGACGTTCTCTATACGCTGATTCGTGGTAAGATGGAAGGTGAGAC
TTTATGGAATGAGGGATTAC

Downstream 100 bases:

>100_bases
GTATGTGGCAAGAAAAGATTGAACATTATGATGCACTCGCGCCGTTCGTGAAAAAAGCGGAGGCGCGGGTAAAACCGTTT
TTCGAAAAGATAGAAGAAAC

Product: GTP-binding proten HflX

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MIEREKVVIVGCQLPDTDDWTYEQSMGELVELVDTAQGEVVARLDQKRQQIDRRTFIGKGKIEELAMLVEQFEPDLLIFN
AELTPAQSKNIRIALNDPDEMKLIDRTQLILDIFASRAQSREGKLQVELAQMNYLLPRLIGQGTQLSRLGGGIGTRGPGE
TKLESDRRHIKRRIDEITKQLEGTVAHRGRYRERRKENRVFQVALVGYTNAGKSTIFNRLTDADTYEQDELFATLDPLTR
ELELPRGGKVLITDTVGFIRDLPTKLVAAFRSTLEEVVGADLILHVIDASNPHYLNQIDTTNAVLEELGASEVPQLEVYN
KKDRLTEDFVGGPLLISAIASEDIVTLTGALEDKIADILTRVHVILPVTAFEHYHPAKEAMYRLEESFLDDGSVELVGYM
REDTRLYATLKQFEV

Sequences:

>Translated_415_residues
MIEREKVVIVGCQLPDTDDWTYEQSMGELVELVDTAQGEVVARLDQKRQQIDRRTFIGKGKIEELAMLVEQFEPDLLIFN
AELTPAQSKNIRIALNDPDEMKLIDRTQLILDIFASRAQSREGKLQVELAQMNYLLPRLIGQGTQLSRLGGGIGTRGPGE
TKLESDRRHIKRRIDEITKQLEGTVAHRGRYRERRKENRVFQVALVGYTNAGKSTIFNRLTDADTYEQDELFATLDPLTR
ELELPRGGKVLITDTVGFIRDLPTKLVAAFRSTLEEVVGADLILHVIDASNPHYLNQIDTTNAVLEELGASEVPQLEVYN
KKDRLTEDFVGGPLLISAIASEDIVTLTGALEDKIADILTRVHVILPVTAFEHYHPAKEAMYRLEESFLDDGSVELVGYM
REDTRLYATLKQFEV
>Mature_415_residues
MIEREKVVIVGCQLPDTDDWTYEQSMGELVELVDTAQGEVVARLDQKRQQIDRRTFIGKGKIEELAMLVEQFEPDLLIFN
AELTPAQSKNIRIALNDPDEMKLIDRTQLILDIFASRAQSREGKLQVELAQMNYLLPRLIGQGTQLSRLGGGIGTRGPGE
TKLESDRRHIKRRIDEITKQLEGTVAHRGRYRERRKENRVFQVALVGYTNAGKSTIFNRLTDADTYEQDELFATLDPLTR
ELELPRGGKVLITDTVGFIRDLPTKLVAAFRSTLEEVVGADLILHVIDASNPHYLNQIDTTNAVLEELGASEVPQLEVYN
KKDRLTEDFVGGPLLISAIASEDIVTLTGALEDKIADILTRVHVILPVTAFEHYHPAKEAMYRLEESFLDDGSVELVGYM
REDTRLYATLKQFEV

Specific function: Unknown

COG id: COG2262

COG function: function code R; GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]

Homologues:

Organism=Homo sapiens, GI310133118, Length=249, Percent_Identity=32.1285140562249, Blast_Score=97, Evalue=4e-20,
Organism=Homo sapiens, GI310133116, Length=182, Percent_Identity=36.2637362637363, Blast_Score=97, Evalue=4e-20,
Organism=Homo sapiens, GI310124269, Length=174, Percent_Identity=36.7816091954023, Blast_Score=96, Evalue=4e-20,
Organism=Homo sapiens, GI310124267, Length=174, Percent_Identity=36.7816091954023, Blast_Score=96, Evalue=4e-20,
Organism=Homo sapiens, GI310124171, Length=174, Percent_Identity=36.7816091954023, Blast_Score=96, Evalue=4e-20,
Organism=Homo sapiens, GI310124169, Length=174, Percent_Identity=36.7816091954023, Blast_Score=96, Evalue=4e-20,
Organism=Escherichia coli, GI1790615, Length=307, Percent_Identity=47.2312703583062, Blast_Score=254, Evalue=6e-69,
Organism=Caenorhabditis elegans, GI17561038, Length=265, Percent_Identity=30.9433962264151, Blast_Score=116, Evalue=2e-26,
Organism=Drosophila melanogaster, GI24650079, Length=355, Percent_Identity=29.2957746478873, Blast_Score=114, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016496
- InterPro:   IPR006073
- InterPro:   IPR002917 [H]

Pfam domain/function: PF01926 MMR_HSR1 [H]

EC number: NA

Molecular weight: Translated: 46876; Mature: 46876

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEREKVVIVGCQLPDTDDWTYEQSMGELVELVDTAQGEVVARLDQKRQQIDRRTFIGKG
CCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
KIEELAMLVEQFEPDLLIFNAELTPAQSKNIRIALNDPDEMKLIDRTQLILDIFASRAQS
CHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCC
REGKLQVELAQMNYLLPRLIGQGTQLSRLGGGIGTRGPGETKLESDRRHIKRRIDEITKQ
CCCCEEEEHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LEGTVAHRGRYRERRKENRVFQVALVGYTNAGKSTIFNRLTDADTYEQDELFATLDPLTR
HHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHH
ELELPRGGKVLITDTVGFIRDLPTKLVAAFRSTLEEVVGADLILHVIDASNPHYLNQIDT
HHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCHHHEEHEECCCCCCCCCCCCH
TNAVLEELGASEVPQLEVYNKKDRLTEDFVGGPLLISAIASEDIVTLTGALEDKIADILT
HHHHHHHCCCCCCCCEEEECCHHHHHHHHCCCHHHHHHHCCCCEEEEHHHHHHHHHHHHH
RVHVILPVTAFEHYHPAKEAMYRLEESFLDDGSVELVGYMREDTRLYATLKQFEV
HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIEREKVVIVGCQLPDTDDWTYEQSMGELVELVDTAQGEVVARLDQKRQQIDRRTFIGKG
CCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
KIEELAMLVEQFEPDLLIFNAELTPAQSKNIRIALNDPDEMKLIDRTQLILDIFASRAQS
CHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCC
REGKLQVELAQMNYLLPRLIGQGTQLSRLGGGIGTRGPGETKLESDRRHIKRRIDEITKQ
CCCCEEEEHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LEGTVAHRGRYRERRKENRVFQVALVGYTNAGKSTIFNRLTDADTYEQDELFATLDPLTR
HHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHH
ELELPRGGKVLITDTVGFIRDLPTKLVAAFRSTLEEVVGADLILHVIDASNPHYLNQIDT
HHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCHHHEEHEECCCCCCCCCCCCH
TNAVLEELGASEVPQLEVYNKKDRLTEDFVGGPLLISAIASEDIVTLTGALEDKIADILT
HHHHHHHCCCCCCCCEEEECCHHHHHHHHCCCHHHHHHHCCCCEEEEHHHHHHHHHHHHH
RVHVILPVTAFEHYHPAKEAMYRLEESFLDDGSVELVGYMREDTRLYATLKQFEV
HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]