Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

Click here to switch to the map view.

The map label for this gene is 229916114

Identifier: 229916114

GI number: 229916114

Start: 345421

End: 346065

Strand: Reverse

Name: 229916114

Synonym: EAT1b_0383

Alternate gene names: NA

Gene position: 346065-345421 (Counterclockwise)

Preceding gene: 229916115

Following gene: 229916110

Centisome position: 11.54

GC content: 46.82

Gene sequence:

>645_bases
ATGCAATCTTCCGTTTACAAACAATATGCGCTACGCATGCTATCAGGGAAGTGGGGCATCTCATTACTCGTTGTCTTAAC
TGTCATGGTCATTCAAGCGATGATCACGACACGACTTGATCTCTCGACGAACGACCCCGAAGTCCTTTTGACCTCGGTGG
CGCTCCTTTACGGGGCGACGGTTTTGCTCGCCCCCATCGAGCTCGGGAAAAATTGGGTGTTTCTTCAGGTCGCGAAAGAT
GAAAAGCCAACGTTCGGATTGTTGATTGAATCGTTTGGGTCACTGAAAGACTATTCACGTGCCGTGGTCTATTATGCCGT
ATTCTATTTAGGTCTAAACGTGCTGATGCTCTTCTTGATCGTACCTGGTGTCTGGTTCTATTTGACGTATCGGATTGTAC
CGTTCATTATGCGAGATAATCCTGACCTATCAGCGTTCCAGGCGATGAGAAAGAGCCGACAGATGATGAAGGGTCACAAA
CAGACGATGTTAAAGCTCTTTGCGAGTTTTATCGGATGGTATGCGCTCGTCCTTCTTACTGGAGGCTTAGCTTATATCTT
TGTCACACCGTATCTTCAAACGGCGATTTCTGGACTCTATTTGGAGCTAAATGCCTCCTATCAAGCAAAACAACCGGTCG
GATAA

Upstream 100 bases:

>100_bases
AGGAAAGTTCAAACCACTTCTTGGATGAGCCAAGGCAGAAAACAGTCGGAAGACTGTTTTTTTGCTATAATGAGAGAAAA
CAATAAATGTAGGTGAATTC

Downstream 100 bases:

>100_bases
TCCGACCGGTTGTTTTATGTTCCATGCTGATCTGACTTTTTAGGATTTGGGGCGTCTTCAAAATCTTGTTTTTCCTCTTC
CGACGCATCCGCATGCCATT

Product: hypothetical protein

Products: NA

Alternate protein names: Group-Specific Protein

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MQSSVYKQYALRMLSGKWGISLLVVLTVMVIQAMITTRLDLSTNDPEVLLTSVALLYGATVLLAPIELGKNWVFLQVAKD
EKPTFGLLIESFGSLKDYSRAVVYYAVFYLGLNVLMLFLIVPGVWFYLTYRIVPFIMRDNPDLSAFQAMRKSRQMMKGHK
QTMLKLFASFIGWYALVLLTGGLAYIFVTPYLQTAISGLYLELNASYQAKQPVG

Sequences:

>Translated_214_residues
MQSSVYKQYALRMLSGKWGISLLVVLTVMVIQAMITTRLDLSTNDPEVLLTSVALLYGATVLLAPIELGKNWVFLQVAKD
EKPTFGLLIESFGSLKDYSRAVVYYAVFYLGLNVLMLFLIVPGVWFYLTYRIVPFIMRDNPDLSAFQAMRKSRQMMKGHK
QTMLKLFASFIGWYALVLLTGGLAYIFVTPYLQTAISGLYLELNASYQAKQPVG
>Mature_214_residues
MQSSVYKQYALRMLSGKWGISLLVVLTVMVIQAMITTRLDLSTNDPEVLLTSVALLYGATVLLAPIELGKNWVFLQVAKD
EKPTFGLLIESFGSLKDYSRAVVYYAVFYLGLNVLMLFLIVPGVWFYLTYRIVPFIMRDNPDLSAFQAMRKSRQMMKGHK
QTMLKLFASFIGWYALVLLTGGLAYIFVTPYLQTAISGLYLELNASYQAKQPVG

Specific function: Unknown

COG id: COG5523

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24140; Mature: 24140

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSSVYKQYALRMLSGKWGISLLVVLTVMVIQAMITTRLDLSTNDPEVLLTSVALLYGAT
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
VLLAPIELGKNWVFLQVAKDEKPTFGLLIESFGSLKDYSRAVVYYAVFYLGLNVLMLFLI
HHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VPGVWFYLTYRIVPFIMRDNPDLSAFQAMRKSRQMMKGHKQTMLKLFASFIGWYALVLLT
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GGLAYIFVTPYLQTAISGLYLELNASYQAKQPVG
CCHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCC
>Mature Secondary Structure
MQSSVYKQYALRMLSGKWGISLLVVLTVMVIQAMITTRLDLSTNDPEVLLTSVALLYGAT
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
VLLAPIELGKNWVFLQVAKDEKPTFGLLIESFGSLKDYSRAVVYYAVFYLGLNVLMLFLI
HHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VPGVWFYLTYRIVPFIMRDNPDLSAFQAMRKSRQMMKGHKQTMLKLFASFIGWYALVLLT
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GGLAYIFVTPYLQTAISGLYLELNASYQAKQPVG
CCHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA