| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229916114
Identifier: 229916114
GI number: 229916114
Start: 345421
End: 346065
Strand: Reverse
Name: 229916114
Synonym: EAT1b_0383
Alternate gene names: NA
Gene position: 346065-345421 (Counterclockwise)
Preceding gene: 229916115
Following gene: 229916110
Centisome position: 11.54
GC content: 46.82
Gene sequence:
>645_bases ATGCAATCTTCCGTTTACAAACAATATGCGCTACGCATGCTATCAGGGAAGTGGGGCATCTCATTACTCGTTGTCTTAAC TGTCATGGTCATTCAAGCGATGATCACGACACGACTTGATCTCTCGACGAACGACCCCGAAGTCCTTTTGACCTCGGTGG CGCTCCTTTACGGGGCGACGGTTTTGCTCGCCCCCATCGAGCTCGGGAAAAATTGGGTGTTTCTTCAGGTCGCGAAAGAT GAAAAGCCAACGTTCGGATTGTTGATTGAATCGTTTGGGTCACTGAAAGACTATTCACGTGCCGTGGTCTATTATGCCGT ATTCTATTTAGGTCTAAACGTGCTGATGCTCTTCTTGATCGTACCTGGTGTCTGGTTCTATTTGACGTATCGGATTGTAC CGTTCATTATGCGAGATAATCCTGACCTATCAGCGTTCCAGGCGATGAGAAAGAGCCGACAGATGATGAAGGGTCACAAA CAGACGATGTTAAAGCTCTTTGCGAGTTTTATCGGATGGTATGCGCTCGTCCTTCTTACTGGAGGCTTAGCTTATATCTT TGTCACACCGTATCTTCAAACGGCGATTTCTGGACTCTATTTGGAGCTAAATGCCTCCTATCAAGCAAAACAACCGGTCG GATAA
Upstream 100 bases:
>100_bases AGGAAAGTTCAAACCACTTCTTGGATGAGCCAAGGCAGAAAACAGTCGGAAGACTGTTTTTTTGCTATAATGAGAGAAAA CAATAAATGTAGGTGAATTC
Downstream 100 bases:
>100_bases TCCGACCGGTTGTTTTATGTTCCATGCTGATCTGACTTTTTAGGATTTGGGGCGTCTTCAAAATCTTGTTTTTCCTCTTC CGACGCATCCGCATGCCATT
Product: hypothetical protein
Products: NA
Alternate protein names: Group-Specific Protein
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MQSSVYKQYALRMLSGKWGISLLVVLTVMVIQAMITTRLDLSTNDPEVLLTSVALLYGATVLLAPIELGKNWVFLQVAKD EKPTFGLLIESFGSLKDYSRAVVYYAVFYLGLNVLMLFLIVPGVWFYLTYRIVPFIMRDNPDLSAFQAMRKSRQMMKGHK QTMLKLFASFIGWYALVLLTGGLAYIFVTPYLQTAISGLYLELNASYQAKQPVG
Sequences:
>Translated_214_residues MQSSVYKQYALRMLSGKWGISLLVVLTVMVIQAMITTRLDLSTNDPEVLLTSVALLYGATVLLAPIELGKNWVFLQVAKD EKPTFGLLIESFGSLKDYSRAVVYYAVFYLGLNVLMLFLIVPGVWFYLTYRIVPFIMRDNPDLSAFQAMRKSRQMMKGHK QTMLKLFASFIGWYALVLLTGGLAYIFVTPYLQTAISGLYLELNASYQAKQPVG >Mature_214_residues MQSSVYKQYALRMLSGKWGISLLVVLTVMVIQAMITTRLDLSTNDPEVLLTSVALLYGATVLLAPIELGKNWVFLQVAKD EKPTFGLLIESFGSLKDYSRAVVYYAVFYLGLNVLMLFLIVPGVWFYLTYRIVPFIMRDNPDLSAFQAMRKSRQMMKGHK QTMLKLFASFIGWYALVLLTGGLAYIFVTPYLQTAISGLYLELNASYQAKQPVG
Specific function: Unknown
COG id: COG5523
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24140; Mature: 24140
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSSVYKQYALRMLSGKWGISLLVVLTVMVIQAMITTRLDLSTNDPEVLLTSVALLYGAT CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH VLLAPIELGKNWVFLQVAKDEKPTFGLLIESFGSLKDYSRAVVYYAVFYLGLNVLMLFLI HHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH VPGVWFYLTYRIVPFIMRDNPDLSAFQAMRKSRQMMKGHKQTMLKLFASFIGWYALVLLT HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GGLAYIFVTPYLQTAISGLYLELNASYQAKQPVG CCHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCC >Mature Secondary Structure MQSSVYKQYALRMLSGKWGISLLVVLTVMVIQAMITTRLDLSTNDPEVLLTSVALLYGAT CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH VLLAPIELGKNWVFLQVAKDEKPTFGLLIESFGSLKDYSRAVVYYAVFYLGLNVLMLFLI HHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH VPGVWFYLTYRIVPFIMRDNPDLSAFQAMRKSRQMMKGHKQTMLKLFASFIGWYALVLLT HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GGLAYIFVTPYLQTAISGLYLELNASYQAKQPVG CCHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA