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The map label for this gene is ycdQ [C]

Identifier: 229916088

GI number: 229916088

Start: 318967

End: 320028

Strand: Reverse

Name: ycdQ [C]

Synonym: EAT1b_0357

Alternate gene names: 229916088

Gene position: 320028-318967 (Counterclockwise)

Preceding gene: 229916089

Following gene: 229916085

Centisome position: 10.67

GC content: 46.14

Gene sequence:

>1062_bases
ATGCAAATGCAAGAAGTGGAGACACGGCAAGCGTATACGATTTTGATTCCGGCCTATAACCCTGACGAGGCACTCGTCAC
ACTCGTGGAGAAGTTGAGGGCGAGCGGGTTTTCGACCATCATTGTGGTCAATGACGGTAGTGACGAATCGTCGGTAGGCA
CATTTGATAAGATTGCATCATTTGTCGACCAAGTGCTAACGCACGAACAGAATCAAGGAAAGGGTGCCGCAATCAAGACG
GGATTACGCTACGCGGTAGATAAGTACCCTGAAAAAATAGGGGTGATCACGGTCGATGCCGACGGGCAGCATTTACCGCA
AGATGTCGTCAACGTGTATGAGGAAGGTGTGAATAAACCACATCATCTCATCATGGGATGCCGTGATTTTAGCGGAGAGG
CGATTCCGCTCCGAAGCCGATTCGGCAATCAGTCGACACGGCTTGTCATGTTGATCGGGAGTGGGTTGAAGTTAAAAGAC
ACGCAGACGGGACTTCGTGCCATTCCAATGCGATACGCCAGGCAACTACTTGACATTCCGGGAAATCGATATGAGTTCGA
GATGAATATGCTCACGTTCACGAAACGATTGCAGGTACCGATTCAACAAACGACCATCCAGACCGTATATGAGAATGAAA
ATGACTCATCCCATTTCCGACCGATTCTCGACTCAATCTTAATTTACCGGATGTTTTTAATGTATTCGTTATCGTCTGTC
GCCTCGTTCCTTGTCGACGTTGGGATGTATGCCCTCTTCATTTATTTATTATCCCCATACTTCGACACAGTCCACGTCGT
CATTGCGACGGTTATCGCTCGAGTCATCTCCTCTCTATTCAATTATCTCATTAATCGAAAAGTAGTCTTCGATTCGAAGG
CGCGGCGGTCCCTTCCAAAATACTTTAGTCTCGTCGTGCTACAAATGGCTGTTTCGGCACTTCTTGTCTTTCTCCTGTTT
CTCTTGTTCAGACAGGGTGAGGTCATCTTAAAAGTAGTCGTCGATAGCTTTCTCTTTTTCGTCAGTTATTATATTCAAAA
AAGATGGATATTCAAAAAATGA

Upstream 100 bases:

>100_bases
TATCGGGTAAACTCATACATCAGCCTTAGGGCTGATGTTTTTTTAATTGGGAATGCGAATTCATTGCTTCGGGTATAGGG
GAATGGAAGGAGGGGTGGCG

Downstream 100 bases:

>100_bases
CCGGTCATGATTTCATGACCGGTTTAATATGCGAGCGTTCCTGTTTTGACGGACGTATAGCGATGTAATTCTTTGGGGCT
TGTGATGCCGGTTTTTTGCA

Product: glycosyl transferase family 2

Products: GDP; dolichyl D-mannosyl phosphate

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MQMQEVETRQAYTILIPAYNPDEALVTLVEKLRASGFSTIIVVNDGSDESSVGTFDKIASFVDQVLTHEQNQGKGAAIKT
GLRYAVDKYPEKIGVITVDADGQHLPQDVVNVYEEGVNKPHHLIMGCRDFSGEAIPLRSRFGNQSTRLVMLIGSGLKLKD
TQTGLRAIPMRYARQLLDIPGNRYEFEMNMLTFTKRLQVPIQQTTIQTVYENENDSSHFRPILDSILIYRMFLMYSLSSV
ASFLVDVGMYALFIYLLSPYFDTVHVVIATVIARVISSLFNYLINRKVVFDSKARRSLPKYFSLVVLQMAVSALLVFLLF
LLFRQGEVILKVVVDSFLFFVSYYIQKRWIFKK

Sequences:

>Translated_353_residues
MQMQEVETRQAYTILIPAYNPDEALVTLVEKLRASGFSTIIVVNDGSDESSVGTFDKIASFVDQVLTHEQNQGKGAAIKT
GLRYAVDKYPEKIGVITVDADGQHLPQDVVNVYEEGVNKPHHLIMGCRDFSGEAIPLRSRFGNQSTRLVMLIGSGLKLKD
TQTGLRAIPMRYARQLLDIPGNRYEFEMNMLTFTKRLQVPIQQTTIQTVYENENDSSHFRPILDSILIYRMFLMYSLSSV
ASFLVDVGMYALFIYLLSPYFDTVHVVIATVIARVISSLFNYLINRKVVFDSKARRSLPKYFSLVVLQMAVSALLVFLLF
LLFRQGEVILKVVVDSFLFFVSYYIQKRWIFKK
>Mature_353_residues
MQMQEVETRQAYTILIPAYNPDEALVTLVEKLRASGFSTIIVVNDGSDESSVGTFDKIASFVDQVLTHEQNQGKGAAIKT
GLRYAVDKYPEKIGVITVDADGQHLPQDVVNVYEEGVNKPHHLIMGCRDFSGEAIPLRSRFGNQSTRLVMLIGSGLKLKD
TQTGLRAIPMRYARQLLDIPGNRYEFEMNMLTFTKRLQVPIQQTTIQTVYENENDSSHFRPILDSILIYRMFLMYSLSSV
ASFLVDVGMYALFIYLLSPYFDTVHVVIATVIARVISSLFNYLINRKVVFDSKARRSLPKYFSLVVLQMAVSALLVFLLF
LLFRQGEVILKVVVDSFLFFVSYYIQKRWIFKK

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.4.1.83

Molecular weight: Translated: 40222; Mature: 40222

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQMQEVETRQAYTILIPAYNPDEALVTLVEKLRASGFSTIIVVNDGSDESSVGTFDKIAS
CCCHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHH
FVDQVLTHEQNQGKGAAIKTGLRYAVDKYPEKIGVITVDADGQHLPQDVVNVYEEGVNKP
HHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHEEEEEECCCCCCCCHHHHHHHHHHCCCC
HHLIMGCRDFSGEAIPLRSRFGNQSTRLVMLIGSGLKLKDTQTGLRAIPMRYARQLLDIP
HHEEEECCCCCCCEEEHHHHCCCCCCEEEEEECCCCEECCCHHHHHHHHHHHHHHHHHCC
GNRYEFEMNMLTFTKRLQVPIQQTTIQTVYENENDSSHFRPILDSILIYRMFLMYSLSSV
CCCEEEEEHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ASFLVDVGMYALFIYLLSPYFDTVHVVIATVIARVISSLFNYLINRKVVFDSKARRSLPK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHH
YFSLVVLQMAVSALLVFLLFLLFRQGEVILKVVVDSFLFFVSYYIQKRWIFKK
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQMQEVETRQAYTILIPAYNPDEALVTLVEKLRASGFSTIIVVNDGSDESSVGTFDKIAS
CCCHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHH
FVDQVLTHEQNQGKGAAIKTGLRYAVDKYPEKIGVITVDADGQHLPQDVVNVYEEGVNKP
HHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHEEEEEECCCCCCCCHHHHHHHHHHCCCC
HHLIMGCRDFSGEAIPLRSRFGNQSTRLVMLIGSGLKLKDTQTGLRAIPMRYARQLLDIP
HHEEEECCCCCCCEEEHHHHCCCCCCEEEEEECCCCEECCCHHHHHHHHHHHHHHHHHCC
GNRYEFEMNMLTFTKRLQVPIQQTTIQTVYENENDSSHFRPILDSILIYRMFLMYSLSSV
CCCEEEEEHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ASFLVDVGMYALFIYLLSPYFDTVHVVIATVIARVISSLFNYLINRKVVFDSKARRSLPK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHH
YFSLVVLQMAVSALLVFLLFLLFRQGEVILKVVVDSFLFFVSYYIQKRWIFKK
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GDPmannose; dolichyl phosphate

Specific reaction: GDP-mannose + dolichyl phosphate = GDP + dolichyl D-mannosyl phosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]