| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229916085
Identifier: 229916085
GI number: 229916085
Start: 316811
End: 317674
Strand: Reverse
Name: 229916085
Synonym: EAT1b_0354
Alternate gene names: NA
Gene position: 317674-316811 (Counterclockwise)
Preceding gene: 229916088
Following gene: 229916084
Centisome position: 10.59
GC content: 50.69
Gene sequence:
>864_bases ATGGAAATGATTCTTTTGGCACTCTTACCGGCACTCATGTGGGGAAGTATTCCACTCATCGTGTCGAAAGTGGGAGGAAA ACCGATTCAGCAGTTAATCGGAACGACCATCGGGGCGATGATCATGGCGGTCGTGATTGCCCTCGTCTTCCGACCAGAGT TCACGACACTCGCCATCGTGACCGGATTTATCTCAGGGGCGTTCTGGGCGCTCGGTCAATATTTGCAGTTCCAATCGTTT CAAATCTTAAGCGTCTCCAAAGCGATGCCGATCAGTACGGGAATGCAGCTCGTCGGGACGTCTCTTTTTGGGGTCATCGT ACTCGGGGACTGGCAGACGACGACGGAGCTATGGTTAGGGTTTTCAGCGCTCGTCTTGATCATCATCGGGGCGACCATGA CCTCATACCAACAGAAGAAAGATCAGGACAGTGCCGGTGCTTTGAAAAAGGGACTACTCGTCCTCTTCGTCTCGAGTATC GGTTACGTCACGTATGCCGTCTTGACGAACTACTTTGAAGTAGAAGGGATTACCGCGATTCTTCCACAATCCGTCGGGAT GTTCATCGCGGCACTTCTGTTCAGTCTTCGTGAGAAAGACGTCAAGAAACTGGATCCACGCACATTCAAAAATATCTTGG CCGGGCTTGCCTGGGGAATCGGGAACTTCGGACTTTTCGTTTCAAGCGGAGAAGTGGGGATCGCGACCTCGTTCGCCTTA TCCCAATTGAACGTCGTCGTGGCGACTCTCGGTGGGATCTATCTCTTGAAAGAAGAGAAGACGACAAAGGAACGTGTCTT CGTCTTTATGGGAATTGGTTTGATTGTCGTCGCTGGATTTATGCTTGGTATTGCCAAGAGTTAA
Upstream 100 bases:
>100_bases AGTATTCGACATGGCAATTCCCTTTTTGAATTTAGGTTTATAAAATTGGAGACGTGGGAATTTCATGTTAGACGTTATAT TAAGAAAGCAGGTGTGCTTC
Downstream 100 bases:
>100_bases ATTTTTATTATGAACTGAAAAGAACCTTGAATGCGCACTCGTGCTAGAGTGCCATTCAAGGTTTTTGTATTGAGTAAATT TTAATCGTTGACGTGAGGGC
Product: sugar transport family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 287; Mature: 287
Protein sequence:
>287_residues MEMILLALLPALMWGSIPLIVSKVGGKPIQQLIGTTIGAMIMAVVIALVFRPEFTTLAIVTGFISGAFWALGQYLQFQSF QILSVSKAMPISTGMQLVGTSLFGVIVLGDWQTTTELWLGFSALVLIIIGATMTSYQQKKDQDSAGALKKGLLVLFVSSI GYVTYAVLTNYFEVEGITAILPQSVGMFIAALLFSLREKDVKKLDPRTFKNILAGLAWGIGNFGLFVSSGEVGIATSFAL SQLNVVVATLGGIYLLKEEKTTKERVFVFMGIGLIVVAGFMLGIAKS
Sequences:
>Translated_287_residues MEMILLALLPALMWGSIPLIVSKVGGKPIQQLIGTTIGAMIMAVVIALVFRPEFTTLAIVTGFISGAFWALGQYLQFQSF QILSVSKAMPISTGMQLVGTSLFGVIVLGDWQTTTELWLGFSALVLIIIGATMTSYQQKKDQDSAGALKKGLLVLFVSSI GYVTYAVLTNYFEVEGITAILPQSVGMFIAALLFSLREKDVKKLDPRTFKNILAGLAWGIGNFGLFVSSGEVGIATSFAL SQLNVVVATLGGIYLLKEEKTTKERVFVFMGIGLIVVAGFMLGIAKS >Mature_287_residues MEMILLALLPALMWGSIPLIVSKVGGKPIQQLIGTTIGAMIMAVVIALVFRPEFTTLAIVTGFISGAFWALGQYLQFQSF QILSVSKAMPISTGMQLVGTSLFGVIVLGDWQTTTELWLGFSALVLIIIGATMTSYQQKKDQDSAGALKKGLLVLFVSSI GYVTYAVLTNYFEVEGITAILPQSVGMFIAALLFSLREKDVKKLDPRTFKNILAGLAWGIGNFGLFVSSGEVGIATSFAL SQLNVVVATLGGIYLLKEEKTTKERVFVFMGIGLIVVAGFMLGIAKS
Specific function: Unknown
COG id: COG4975
COG function: function code G; Putative glucose uptake permease
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GRP transporter (TC 2.A.7.5) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010651 [H]
Pfam domain/function: PF06800 Sugar_transport [H]
EC number: NA
Molecular weight: Translated: 30767; Mature: 30767
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEMILLALLPALMWGSIPLIVSKVGGKPIQQLIGTTIGAMIMAVVIALVFRPEFTTLAIV CHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH TGFISGAFWALGQYLQFQSFQILSVSKAMPISTGMQLVGTSLFGVIVLGDWQTTTELWLG HHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHEEEEEECCCCHHHHHHHH FSALVLIIIGATMTSYQQKKDQDSAGALKKGLLVLFVSSIGYVTYAVLTNYFEVEGITAI HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH LPQSVGMFIAALLFSLREKDVKKLDPRTFKNILAGLAWGIGNFGLFVSSGEVGIATSFAL HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHH SQLNVVVATLGGIYLLKEEKTTKERVFVFMGIGLIVVAGFMLGIAKS HHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MEMILLALLPALMWGSIPLIVSKVGGKPIQQLIGTTIGAMIMAVVIALVFRPEFTTLAIV CHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH TGFISGAFWALGQYLQFQSFQILSVSKAMPISTGMQLVGTSLFGVIVLGDWQTTTELWLG HHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHEEEEEECCCCHHHHHHHH FSALVLIIIGATMTSYQQKKDQDSAGALKKGLLVLFVSSIGYVTYAVLTNYFEVEGITAI HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH LPQSVGMFIAALLFSLREKDVKKLDPRTFKNILAGLAWGIGNFGLFVSSGEVGIATSFAL HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHH SQLNVVVATLGGIYLLKEEKTTKERVFVFMGIGLIVVAGFMLGIAKS HHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11679669 [H]