| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229916083
Identifier: 229916083
GI number: 229916083
Start: 315325
End: 316014
Strand: Reverse
Name: 229916083
Synonym: EAT1b_0352
Alternate gene names: NA
Gene position: 316014-315325 (Counterclockwise)
Preceding gene: 229916084
Following gene: 229916082
Centisome position: 10.53
GC content: 35.22
Gene sequence:
>690_bases ATGAGAGAAGTAAGGCTTAGTTTTAACTTTTTTCACGACTTAGAGAATGAAAAATGGGCATTACAGATGCTAAATATCTT CGATACGTTTCAGATTGAAATCGGAAAGATGGGATTTTACGAACCACTTAGAACTGAGTTTTCAAATGACACCTTTGTGA AGATGTGGACAGAAGGTGACGATGATTTTTACAGCTTTATTTGTCGATTGAAAAATAGTAAAGGGTATCTCAACATTCAT AACTTGAAAGATGGTTTACCAGGAAATGTTGGTTTCGTTTTTGTGGTCAGCAAGACAAATTTTCTGAATGAAATGGACAA ATGGATTCGGTTATTTGATCGAATTTGTCGAGAGTGGGGTCCATTCCAGGCATCAATATCTAGAAGGATTGAAGAACGAG AGGATCTCATGTACGAAACAGGTTTTTCTAAAGTTAAGGAAGTGGAATGGCTTAATTATTGGAGTGATGAATTGTTGTGC GTGAATTCAGTTTCTATTCCAAATGGGGTCAAAGACTATAATTGTTATGATGGAGTTGCATTTAACAAAGGGTATGTATT CCAGTTGATGAATTTGATTGATGATCCCTCGTACTATCAGCTATCTGAAAAGATCAAAGCCATGATTGGTCCAAGCTTCT TTTATAAATGTAGTGAAGATTTAGATTTGCTGGATTTTTATAGTCATTGA
Upstream 100 bases:
>100_bases TGTATAAAAACAAAATTTTTCATAATGTTGTTGTTGAGTGATGAAATGTAATTTGTCATTTTCGAATTTAAAAGATGAAT ACAGGGTGAGTTGAAAATAT
Downstream 100 bases:
>100_bases AGTAATTAAGGCTGACGTTCATCTTGGGAACTTCATTTTCTGTTCGTTAAATTGTTACATATCATTTGGCATTACATGTA TACGAGAACAGTAATTTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MREVRLSFNFFHDLENEKWALQMLNIFDTFQIEIGKMGFYEPLRTEFSNDTFVKMWTEGDDDFYSFICRLKNSKGYLNIH NLKDGLPGNVGFVFVVSKTNFLNEMDKWIRLFDRICREWGPFQASISRRIEEREDLMYETGFSKVKEVEWLNYWSDELLC VNSVSIPNGVKDYNCYDGVAFNKGYVFQLMNLIDDPSYYQLSEKIKAMIGPSFFYKCSEDLDLLDFYSH
Sequences:
>Translated_229_residues MREVRLSFNFFHDLENEKWALQMLNIFDTFQIEIGKMGFYEPLRTEFSNDTFVKMWTEGDDDFYSFICRLKNSKGYLNIH NLKDGLPGNVGFVFVVSKTNFLNEMDKWIRLFDRICREWGPFQASISRRIEEREDLMYETGFSKVKEVEWLNYWSDELLC VNSVSIPNGVKDYNCYDGVAFNKGYVFQLMNLIDDPSYYQLSEKIKAMIGPSFFYKCSEDLDLLDFYSH >Mature_229_residues MREVRLSFNFFHDLENEKWALQMLNIFDTFQIEIGKMGFYEPLRTEFSNDTFVKMWTEGDDDFYSFICRLKNSKGYLNIH NLKDGLPGNVGFVFVVSKTNFLNEMDKWIRLFDRICREWGPFQASISRRIEEREDLMYETGFSKVKEVEWLNYWSDELLC VNSVSIPNGVKDYNCYDGVAFNKGYVFQLMNLIDDPSYYQLSEKIKAMIGPSFFYKCSEDLDLLDFYSH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27252; Mature: 27252
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MREVRLSFNFFHDLENEKWALQMLNIFDTFQIEIGKMGFYEPLRTEFSNDTFVKMWTEGD CCEEEEEHHHHHHCCCCHHHHHHHHHHHHEEEEECCCCCCHHHHHHCCCCCEEEEEECCC DDFYSFICRLKNSKGYLNIHNLKDGLPGNVGFVFVVSKTNFLNEMDKWIRLFDRICREWG HHHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHCC PFQASISRRIEEREDLMYETGFSKVKEVEWLNYWSDELLCVNSVSIPNGVKDYNCYDGVA CHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCEE FNKGYVFQLMNLIDDPSYYQLSEKIKAMIGPSFFYKCSEDLDLLDFYSH ECCHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHEECCCCCCHHHHCCC >Mature Secondary Structure MREVRLSFNFFHDLENEKWALQMLNIFDTFQIEIGKMGFYEPLRTEFSNDTFVKMWTEGD CCEEEEEHHHHHHCCCCHHHHHHHHHHHHEEEEECCCCCCHHHHHHCCCCCEEEEEECCC DDFYSFICRLKNSKGYLNIHNLKDGLPGNVGFVFVVSKTNFLNEMDKWIRLFDRICREWG HHHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHCC PFQASISRRIEEREDLMYETGFSKVKEVEWLNYWSDELLCVNSVSIPNGVKDYNCYDGVA CHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCEE FNKGYVFQLMNLIDDPSYYQLSEKIKAMIGPSFFYKCSEDLDLLDFYSH ECCHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHEECCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA