| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is mviM [H]
Identifier: 229916049
GI number: 229916049
Start: 285792
End: 286694
Strand: Reverse
Name: mviM [H]
Synonym: EAT1b_0317
Alternate gene names: 229916049
Gene position: 286694-285792 (Counterclockwise)
Preceding gene: 229916050
Following gene: 229916048
Centisome position: 9.56
GC content: 47.73
Gene sequence:
>903_bases ATGAATATTTTGGTAGTAGGCATAGGTGACGTGGCAAAAAAAGCGTATCTGCCAGTATATGCCGGATTAAAGGACGTCGA TGTGTATCTCGTCTCTAGAGATGAACAAAAGTTACACGAAGTCATCTCGACCTATCGTTTTAAAGGAGGATATACGGAGC TCGACGCCGTGCCGATGACAGAAATCGATGCCGTCATGATTCATTCGACGACAGCTGTCCATTATGAGCAAGCCGAGTAT TGTCTGCGGCAAAGGAAGCATGTCTTCATCGACAAACCGATCACGTTCACTCTTGAAGAGACGGAGCGACTCGTCGCACT CGCTAACGAGAATGGAGTCTATCTCGTCACGGGCTTCAATCGCCGATTTGCGACGGCCACACAGGCACTCAAACAAATCG AAGAAAAAAATATGGTCTTCATTCAAAAGAACAGAACGTATAAACCGGCAACACTCCGCGAATTTGTGATCGAGGATTTC GTGCATGTCGTCGATACGCTCCGTTATTTGACCGATCTTCAGCCTGTCGAGCGGTTGCGCGTGACACCACGGTTTGAAGG GGATGTGCTGAAACAAGTGATGATTCATTTCATGGCAGGGGGAATCGAAGCAATCGGTTGGATGAACCGAGACAACGGTT GTACCGAAGAAGTGATGGAGGTCATGTCACCGACCGTGAAGCGGGTCACACGCGATGTGGAGCGGATTACAGACTATGGA CGAGACGGTGTGAAGGAATGGTCGCTCGACCCGTGGGAGTCCAATTTAAAGCGTCGAGGGTTTATCGACTTGATTGATGA CTTTATCAAACTGTTAAATGGGGAAGCGAACAAGTCAGTCCTAGCTGAGGATAGTTTAGAGACACATCGTCTATGTGAAG AGATTCTTAAAAACGTGCAATGA
Upstream 100 bases:
>100_bases CGCGATTCGTGAACCGATCACAAGTTTTGAGATTGTATCTATTACGTGAGCCCGAGGCAGTCGCTTCGGGCTTTCTACAT AATATTGGAGGAGTGAGTAG
Downstream 100 bases:
>100_bases ACCCGCTGTTTCTGTCAGATTCAGAGCGGGTAAAAACCCGATAAAAGGAGGCGATTTCGTTGGATATTCGTGAACTGATT ATGCAAATCAATGACTATTT
Product: oxidoreductase domain protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MNILVVGIGDVAKKAYLPVYAGLKDVDVYLVSRDEQKLHEVISTYRFKGGYTELDAVPMTEIDAVMIHSTTAVHYEQAEY CLRQRKHVFIDKPITFTLEETERLVALANENGVYLVTGFNRRFATATQALKQIEEKNMVFIQKNRTYKPATLREFVIEDF VHVVDTLRYLTDLQPVERLRVTPRFEGDVLKQVMIHFMAGGIEAIGWMNRDNGCTEEVMEVMSPTVKRVTRDVERITDYG RDGVKEWSLDPWESNLKRRGFIDLIDDFIKLLNGEANKSVLAEDSLETHRLCEEILKNVQ
Sequences:
>Translated_300_residues MNILVVGIGDVAKKAYLPVYAGLKDVDVYLVSRDEQKLHEVISTYRFKGGYTELDAVPMTEIDAVMIHSTTAVHYEQAEY CLRQRKHVFIDKPITFTLEETERLVALANENGVYLVTGFNRRFATATQALKQIEEKNMVFIQKNRTYKPATLREFVIEDF VHVVDTLRYLTDLQPVERLRVTPRFEGDVLKQVMIHFMAGGIEAIGWMNRDNGCTEEVMEVMSPTVKRVTRDVERITDYG RDGVKEWSLDPWESNLKRRGFIDLIDDFIKLLNGEANKSVLAEDSLETHRLCEEILKNVQ >Mature_300_residues MNILVVGIGDVAKKAYLPVYAGLKDVDVYLVSRDEQKLHEVISTYRFKGGYTELDAVPMTEIDAVMIHSTTAVHYEQAEY CLRQRKHVFIDKPITFTLEETERLVALANENGVYLVTGFNRRFATATQALKQIEEKNMVFIQKNRTYKPATLREFVIEDF VHVVDTLRYLTDLQPVERLRVTPRFEGDVLKQVMIHFMAGGIEAIGWMNRDNGCTEEVMEVMSPTVKRVTRDVERITDYG RDGVKEWSLDPWESNLKRRGFIDLIDDFIKLLNGEANKSVLAEDSLETHRLCEEILKNVQ
Specific function: Unknown
COG id: COG0673
COG function: function code R; Predicted dehydrogenases and related proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To S.typhimurium mviM [H]
Homologues:
Organism=Escherichia coli, GI1787307, Length=305, Percent_Identity=27.5409836065574, Blast_Score=115, Evalue=3e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR000683 - InterPro: IPR004104 [H]
Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]
EC number: NA
Molecular weight: Translated: 34597; Mature: 34597
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNILVVGIGDVAKKAYLPVYAGLKDVDVYLVSRDEQKLHEVISTYRFKGGYTELDAVPMT CCEEEEECCHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCC EIDAVMIHSTTAVHYEQAEYCLRQRKHVFIDKPITFTLEETERLVALANENGVYLVTGFN HHCEEEEECCHHHHHHHHHHHHHHCCCEEECCCEEEEEHHHCEEEEEECCCCEEEEECCC RRFATATQALKQIEEKNMVFIQKNRTYKPATLREFVIEDFVHVVDTLRYLTDLQPVERLR CHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHC VTPRFEGDVLKQVMIHFMAGGIEAIGWMNRDNGCTEEVMEVMSPTVKRVTRDVERITDYG CCCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC RDGVKEWSLDPWESNLKRRGFIDLIDDFIKLLNGEANKSVLAEDSLETHRLCEEILKNVQ CCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHCC >Mature Secondary Structure MNILVVGIGDVAKKAYLPVYAGLKDVDVYLVSRDEQKLHEVISTYRFKGGYTELDAVPMT CCEEEEECCHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCC EIDAVMIHSTTAVHYEQAEYCLRQRKHVFIDKPITFTLEETERLVALANENGVYLVTGFN HHCEEEEECCHHHHHHHHHHHHHHCCCEEECCCEEEEEHHHCEEEEEECCCCEEEEECCC RRFATATQALKQIEEKNMVFIQKNRTYKPATLREFVIEDFVHVVDTLRYLTDLQPVERLR CHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHC VTPRFEGDVLKQVMIHFMAGGIEAIGWMNRDNGCTEEVMEVMSPTVKRVTRDVERITDYG CCCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC RDGVKEWSLDPWESNLKRRGFIDLIDDFIKLLNGEANKSVLAEDSLETHRLCEEILKNVQ CCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503 [H]