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The map label for this gene is yhfW [H]

Identifier: 229916042

GI number: 229916042

Start: 277853

End: 279385

Strand: Reverse

Name: yhfW [H]

Synonym: EAT1b_0310

Alternate gene names: 229916042

Gene position: 279385-277853 (Counterclockwise)

Preceding gene: 229916045

Following gene: 229916041

Centisome position: 9.31

GC content: 48.21

Gene sequence:

>1533_bases
ATGCATCGTTATCCGTTCACGAACTCCATTTGGCGTCAACATGATACTGGGACGCCGTACCCATCCCTTTCCGTTTCAGA
ATCGACCGAAGTCGTCGTCATCGGGGCAGGGATTGCAGGACTCGTCTGCGCCTATGAACTCCAAAAACGAGGGAGGCAAG
TGACGCTTTTAGAAGCGTTAGAGATTGGACATGGGACGACGGGACATACGACGGCAAAATGTTCCGTTCAACATGGGACG
ATTTATCATAAGCTGATTCGTCATTTTGATGAATCCATCGCGCGTTTATATTACGAGTTCAACTCAGAAGCGCTCGTCTA
TTTGAAAAATCAAATCGAAGAAGGGTTTGACTGCGATTACGCGAATGAACAATCGTTTCTTTATTCTAGGGAACCGAACG
AAGAACTTACGAAAGAACTGGATGCGTATCGTCGCTTAAAGATTGACGGGGGAGAAGCGACGGAAGAAGTGAGAAAGGCG
CTCCCGTTTTCAATCGAGCAGGCGTTGGTGATTCATGACCAAGCCCAATTCCACCCCGTGAAATATCTACGTGAATTAGC
GAATCGGTTTGTTCAACACGGTGGGAAGATTTATGAAAACTCTAGAGCGACGGAAGTGAGTCAAGGACCGCGTCCTGTAG
TCACTACTTCTACCGGTAGAAGAGTACAGGGAAATCAAGTCGTGATCGCGACCCATTATCCATTCAATGACCTGCGCGGG
TTATATGTGTCGAAATTTTCTGTTGAGCGATCGTATATTGTCGCCTGTGAATCGGGGAGTCGACCACTTAAAGGGATGTA
CTTAGAAGTAGGAGAGCGCAAACGCTCGTTTCGGTCCTATGAGGAAAACGGAAAGACCTATTTACTAGTTGGCGGTGAAG
GGCATACGGCGGGGCAAGTCACTGACACGCGTAGCCGATATGATCGATTAGAGCATGATGCCCAGGCACATTTCGAAACA
AATCGGGCATCCTATCGGTGGTCATCTCAAGATCTTATCACCTTAGACGGGCTTCCTTATGTCGGCCAAATGTTCAAGCG
AGAACCAGATCTCTTTGTGGCGACTGGCTTTTCAAAATGGGGGATGACGAACGGAATCGCTGCCGGGACCTTGCTCGCGG
ATCAACTCACAGGTCGTCCGAACCGATTCGTCAATCTGGTCTCACCGCTCCGTCAAACGGTTAAATCTAGTGATATCAGT
GCATTTCTTAAAACGAACTTAGATACTGCCACTCAATTTGCGAAAGGGACAGTCGATCGGCTACTTGAACGAAAAAATGT
AAAAGACCTACAGCTAGACGAGAGTGGGGTCGTGCAAGTTGATGGCAAGACGAGCGGCGTTTATCGAGATTTGGATAACC
AATGCCATGTCGTTAACCTGACCTGTACGCACCTCGGCTGTACAGTGAAATGGAACAATGCCGAGCGGTCATGGGATTGT
CCATGCCACGGCTCTCGTTTCGATGCAAAAGGTAACGTATTAGAAGGCCCTGCCACAAAACCACTTTCCTACAGCAAGCG
AGAAGATTTGTAA

Upstream 100 bases:

>100_bases
CTGATAAAATAAAGAACTAGGTCAATGATTGATCGGCGGTGAAAGAATTGTGTTTCGGGTATAAGGGTAAAGATGTCACT
TTTTGAGAGGAGAATGCGTC

Downstream 100 bases:

>100_bases
ACTGGTGTAGGCAAAGGTTGACATCTATAATAAAGTAGAAAGGGAACAGAATAACACATAGGGGTGAAAGACAGATGGAA
GTTACAAAAGAATGGCGTGA

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 510; Mature: 510

Protein sequence:

>510_residues
MHRYPFTNSIWRQHDTGTPYPSLSVSESTEVVVIGAGIAGLVCAYELQKRGRQVTLLEALEIGHGTTGHTTAKCSVQHGT
IYHKLIRHFDESIARLYYEFNSEALVYLKNQIEEGFDCDYANEQSFLYSREPNEELTKELDAYRRLKIDGGEATEEVRKA
LPFSIEQALVIHDQAQFHPVKYLRELANRFVQHGGKIYENSRATEVSQGPRPVVTTSTGRRVQGNQVVIATHYPFNDLRG
LYVSKFSVERSYIVACESGSRPLKGMYLEVGERKRSFRSYEENGKTYLLVGGEGHTAGQVTDTRSRYDRLEHDAQAHFET
NRASYRWSSQDLITLDGLPYVGQMFKREPDLFVATGFSKWGMTNGIAAGTLLADQLTGRPNRFVNLVSPLRQTVKSSDIS
AFLKTNLDTATQFAKGTVDRLLERKNVKDLQLDESGVVQVDGKTSGVYRDLDNQCHVVNLTCTHLGCTVKWNNAERSWDC
PCHGSRFDAKGNVLEGPATKPLSYSKREDL

Sequences:

>Translated_510_residues
MHRYPFTNSIWRQHDTGTPYPSLSVSESTEVVVIGAGIAGLVCAYELQKRGRQVTLLEALEIGHGTTGHTTAKCSVQHGT
IYHKLIRHFDESIARLYYEFNSEALVYLKNQIEEGFDCDYANEQSFLYSREPNEELTKELDAYRRLKIDGGEATEEVRKA
LPFSIEQALVIHDQAQFHPVKYLRELANRFVQHGGKIYENSRATEVSQGPRPVVTTSTGRRVQGNQVVIATHYPFNDLRG
LYVSKFSVERSYIVACESGSRPLKGMYLEVGERKRSFRSYEENGKTYLLVGGEGHTAGQVTDTRSRYDRLEHDAQAHFET
NRASYRWSSQDLITLDGLPYVGQMFKREPDLFVATGFSKWGMTNGIAAGTLLADQLTGRPNRFVNLVSPLRQTVKSSDIS
AFLKTNLDTATQFAKGTVDRLLERKNVKDLQLDESGVVQVDGKTSGVYRDLDNQCHVVNLTCTHLGCTVKWNNAERSWDC
PCHGSRFDAKGNVLEGPATKPLSYSKREDL
>Mature_510_residues
MHRYPFTNSIWRQHDTGTPYPSLSVSESTEVVVIGAGIAGLVCAYELQKRGRQVTLLEALEIGHGTTGHTTAKCSVQHGT
IYHKLIRHFDESIARLYYEFNSEALVYLKNQIEEGFDCDYANEQSFLYSREPNEELTKELDAYRRLKIDGGEATEEVRKA
LPFSIEQALVIHDQAQFHPVKYLRELANRFVQHGGKIYENSRATEVSQGPRPVVTTSTGRRVQGNQVVIATHYPFNDLRG
LYVSKFSVERSYIVACESGSRPLKGMYLEVGERKRSFRSYEENGKTYLLVGGEGHTAGQVTDTRSRYDRLEHDAQAHFET
NRASYRWSSQDLITLDGLPYVGQMFKREPDLFVATGFSKWGMTNGIAAGTLLADQLTGRPNRFVNLVSPLRQTVKSSDIS
AFLKTNLDTATQFAKGTVDRLLERKNVKDLQLDESGVVQVDGKTSGVYRDLDNQCHVVNLTCTHLGCTVKWNNAERSWDC
PCHGSRFDAKGNVLEGPATKPLSYSKREDL

Specific function: Unknown

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Escherichia coli, GI1787559, Length=379, Percent_Identity=23.4828496042216, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076
- InterPro:   IPR017941
- InterPro:   IPR005805 [H]

Pfam domain/function: PF01266 DAO; PF00355 Rieske [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 57444; Mature: 57444

Theoretical pI: Translated: 7.43; Mature: 7.43

Prosite motif: PS00199 RIESKE_1 ; PS00200 RIESKE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRYPFTNSIWRQHDTGTPYPSLSVSESTEVVVIGAGIAGLVCAYELQKRGRQVTLLEAL
CCCCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCEEEEEEHH
EIGHGTTGHTTAKCSVQHGTIYHKLIRHFDESIARLYYEFNSEALVYLKNQIEEGFDCDY
HHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHCCCCCCCC
ANEQSFLYSREPNEELTKELDAYRRLKIDGGEATEEVRKALPFSIEQALVIHDQAQFHPV
CCCCCEEECCCCCHHHHHHHHHHHEEEECCCHHHHHHHHHCCCCCCCEEEEECCCCCCHH
KYLRELANRFVQHGGKIYENSRATEVSQGPRPVVTTSTGRRVQGNQVVIATHYPFNDLRG
HHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCEEECCCCCEEECCEEEEEEECCHHHHCC
LYVSKFSVERSYIVACESGSRPLKGMYLEVGERKRSFRSYEENGKTYLLVGGEGHTAGQV
EEEEEEEECCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCC
TDTRSRYDRLEHDAQAHFETNRASYRWSSQDLITLDGLPYVGQMFKREPDLFVATGFSKW
CHHHHHHHHHHHHHHHHCCCCCCCEEECCCCEEEECCCCHHHHHHCCCCCEEEEECCHHC
GMTNGIAAGTLLADQLTGRPNRFVNLVSPLRQTVKSSDISAFLKTNLDTATQFAKGTVDR
CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LLERKNVKDLQLDESGVVQVDGKTSGVYRDLDNQCHVVNLTCTHLGCTVKWNNAERSWDC
HHHHCCCCCEEECCCCEEEECCCCCCCHHCCCCCEEEEEEEEEEEEEEEEECCCCCCCCC
PCHGSRFDAKGNVLEGPATKPLSYSKREDL
CCCCCCCCCCCCEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MHRYPFTNSIWRQHDTGTPYPSLSVSESTEVVVIGAGIAGLVCAYELQKRGRQVTLLEAL
CCCCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCEEEEEEHH
EIGHGTTGHTTAKCSVQHGTIYHKLIRHFDESIARLYYEFNSEALVYLKNQIEEGFDCDY
HHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHCCCCCCCC
ANEQSFLYSREPNEELTKELDAYRRLKIDGGEATEEVRKALPFSIEQALVIHDQAQFHPV
CCCCCEEECCCCCHHHHHHHHHHHEEEECCCHHHHHHHHHCCCCCCCEEEEECCCCCCHH
KYLRELANRFVQHGGKIYENSRATEVSQGPRPVVTTSTGRRVQGNQVVIATHYPFNDLRG
HHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCEEECCCCCEEECCEEEEEEECCHHHHCC
LYVSKFSVERSYIVACESGSRPLKGMYLEVGERKRSFRSYEENGKTYLLVGGEGHTAGQV
EEEEEEEECCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCC
TDTRSRYDRLEHDAQAHFETNRASYRWSSQDLITLDGLPYVGQMFKREPDLFVATGFSKW
CHHHHHHHHHHHHHHHHCCCCCCCEEECCCCEEEECCCCHHHHHHCCCCCEEEEECCHHC
GMTNGIAAGTLLADQLTGRPNRFVNLVSPLRQTVKSSDISAFLKTNLDTATQFAKGTVDR
CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LLERKNVKDLQLDESGVVQVDGKTSGVYRDLDNQCHVVNLTCTHLGCTVKWNNAERSWDC
HHHHCCCCCEEECCCCEEEECCCCCCCHHCCCCCEEEEEEEEEEEEEEEEECCCCCCCCC
PCHGSRFDAKGNVLEGPATKPLSYSKREDL
CCCCCCCCCCCCEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]